Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 135-638 |
| Cow position: | chr14:12334781-12334287 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 127 |
| Conread position: | 140-398 |
| Cow position: | chr14:31352729-31352470 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 120 |
| Conread position: | 142-546 |
| Cow position: | chr14:15754396-15754801 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 117 |
| Conread position: | 148-396 |
| Cow position: | chr14:12356766-12357012 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 15 |
| Conread position: | 158-398 |
| Cow position: | chr14:35326478-35326715 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 48 |
| Conread position: | 161-396 |
| Cow position: | chr14:40069597-40069831 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 97 |
| Conread position: | 161-422 |
| Cow position: | chr14:48579598-48579345 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 242, 87 |
| Conread position: | 163-389 |
| Cow position: | chr14:43839674-43839454 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 72 |
| Conread position: | 163-396 |
| Cow position: | chr14:24208127-24208357 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 13 |
| Conread position: | 164-363 |
| Cow position: | chr14:20670476-20670674 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 139, 94 |
| Conread position: | 164-392 |
| Cow position: | chr14:46395817-46396040 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 164-396 |
| Cow position: | chr14:11143241-11143010 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr14:34389426-34389648 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 165-328 |
| Cow position: | chr14:20670825-20670663 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 139 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-354 |
| Cow position: | chr14:48565981-48565801 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 36 |
| Conread position: | 165-394 |
| Cow position: | chr14:36456439-36456215 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 92, 170 |
| Conread position: | 165-396 |
| Cow position: | chr14:2335868-2336099 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 94 |
| Conread position: | 165-396 |
| Cow position: | chr14:8808437-8808207 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr14:20735620-20735843 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 165-396 |
| Cow position: | chr14:22649758-22649986 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 165-396 |
| Cow position: | chr14:23934867-23935097 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 93 |
| Conread position: | 165-396 |
| Cow position: | chr14:37835843-37836064 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chr14:21315621-21315839 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 124, 25 |
| Conread position: | 165-398 |
| Cow position: | chr14:21346935-21347167 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 93 |
| Conread position: | 165-398 |
| Cow position: | chr14:38884844-38885077 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 165-422 |
| Cow position: | chr14:36601791-36602045 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 85 |
| Conread position: | 165-648 |
| Cow position: | chr14:27731707-27732194 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 166-659 |
| Cow position: | chr14:2271779-2272260 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 74 |
| Conread position: | 167-421 |
| Cow position: | chr14:49754272-49754019 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 94 |
| Conread position: | 171-396 |
| Cow position: | chr14:26865026-26865246 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 12 |
| Conread position: | 174-396 |
| Cow position: | chr14:45502679-45502897 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 145, 64 |
| Conread position: | 178-396 |
| Cow position: | chr14:3557948-3558173 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 77, 116 |
| Conread position: | 178-433 |
| Cow position: | chr14:33157972-33157734 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 233, 19 |
| Conread position: | 179-396 |
| Cow position: | chr14:43170313-43170529 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 79 |
| Conread position: | 180-394 |
| Cow position: | chr14:47194439-47194226 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 96, 78 |
| Conread position: | 203-667 |
| Cow position: | chr14:40150625-40150172 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 236-392 |
| Cow position: | chr14:3512521-3512366 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 259-500 |
| Cow position: | chr14:29173026-29172785 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 60, 28 |
Show alignments to all cow chromosomes.