Cow genome map


           Conread name:
           Thy1-THY010074B02
        

               Conread position:
               151-396
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               167, 107
               

               Conread position:
               155-396
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 103
               

               Conread position:
               159-396
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 99
               

               Conread position:
               160-399
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 98
               

               Conread position:
               161-422
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 36
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 72
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-398
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               163-586
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 93
               

               Conread position:
               163-654
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               342
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               248, 20
               

               Conread position:
               164-309
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               164-316
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               164-389
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               154, 18
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 97
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 83
               

               Conread position:
               164-399
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 30
               

               Conread position:
               164-399
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-408
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 95
               

               Conread position:
               164-408
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               164-638
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               92, 27
               

               Conread position:
               164-655
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 68
               

               Conread position:
               165-293
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-378
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 97
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               56, 108
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 91
               

               Conread position:
               165-422
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 97
               

               Conread position:
               165-505
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               244
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               106, 93
               

               Conread position:
               165-505
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-650
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               332
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               138, 96
               

               Conread position:
               166-422
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 89
               

               Conread position:
               167-328
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               167-422
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               151, 30
               

               Conread position:
               167-648
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 92
               

               Conread position:
               167-656
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               168-408
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               150, 90
               

               Conread position:
               172-422
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 76
               

               Conread position:
               174-408
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               144, 84
               

               Conread position:
               175-320
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               175-505
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               175-651
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 72
               

               Conread position:
               176-401
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 82
               

               Conread position:
               177-578
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 85
               

               Conread position:
               178-396
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               139, 80
               

               Conread position:
               183-396
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               15, 50
               

               Conread position:
               183-655
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 34
               

               Conread position:
               185-504
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               135, 51
               

               Conread position:
               186-505
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 72
               

               Conread position:
               202-396
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 59
               

               Conread position:
               260-398
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               274-395
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               358-655
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               93, 70
               
Show alignments to all cow chromosomes.