Cow genome map


           Conread name:
           Thy1-THY010074B02
        

               Conread position:
               142-657
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 67
               

               Conread position:
               146-397
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               151-396
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 11
               

               Conread position:
               152-396
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               153-396
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 106
               

               Conread position:
               154-650
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 9
               

               Conread position:
               160-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 13
               

               Conread position:
               160-652
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 62
               

               Conread position:
               161-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 97
               

               Conread position:
               162-394
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 96
               

               Conread position:
               163-388
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-426
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               157, 98
               

               Conread position:
               164-395
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 89
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 45
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 74
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-422
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               164-637
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-641
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               165-282
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               165-286
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               165-352
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               154, 60
               

               Conread position:
               165-362
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-395
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 62
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 56
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               126, 91
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               165-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-409
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 97
               

               Conread position:
               165-410
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 97
               

               Conread position:
               165-418
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               235, 44
               

               Conread position:
               165-422
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 93
               

               Conread position:
               165-641
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 46
               

               Conread position:
               165-654
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 96
               

               Conread position:
               165-656
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               166-395
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               152, 92
               

               Conread position:
               167-393
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 39
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               167-410
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               233, 91
               

               Conread position:
               171-396
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 85
               

               Conread position:
               171-398
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               177-499
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               273, 84
               

               Conread position:
               182-408
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               137, 38
               

               Conread position:
               191-505
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               214-505
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 50
               

               Conread position:
               252-396
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               259-398
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               292-656
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               26, 116
               

               Conread position:
               422-650
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 14
               
Show alignments to all cow chromosomes.