Cow genome map

Conread name: Thy1-THY010074B02

Conread position: 148-396
Cow position: chr18:13727550-13727792 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 13

Conread position: 153-641
Cow position: chr18:42834564-42834089 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 106

Conread position: 154-396
Cow position: chr18:14247054-14246819 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 105

Conread position: 158-408
Cow position: chr18:37709594-37709342 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 103, 123

Conread position: 161-396
Cow position: chr18:6808594-6808359 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 97

Conread position: 161-418
Cow position: chr18:1176626-1176373 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 15

Conread position: 162-398
Cow position: chr18:20220590-20220358 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 68

Conread position: 163-301
Cow position: chr18:27827326-27827461 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 163-396
Cow position: chr18:39683276-39683508 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 95

Conread position: 164-682
Cow position: chr18:29268582-29268091 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 30

Conread position: 165-285
Cow position: chr18:1971073-1971190 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 165-318
Cow position: chr18:43134726-43134575 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 131
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 165-356
Cow position: chr18:1517941-1518127 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 152, 21

Conread position: 165-394
Cow position: chr18:17321141-17321372 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 44

Conread position: 165-394
Cow position: chr18:40702897-40703119 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr18:464457-464671 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 165-396
Cow position: chr18:6087607-6087837 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr18:18470688-18470461 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 151, 52

Conread position: 165-396
Cow position: chr18:22257196-22256966 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr18:30973543-30973773 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr18:32793676-32793447 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr18:40060447-40060677 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr18:54127700-54127474 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 97

Conread position: 165-398
Cow position: chr18:17339656-17339425 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 38

Conread position: 165-399
Cow position: chr18:24230703-24230469 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 98

Conread position: 165-401
Cow position: chr18:17311292-17311065 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 17, 36

Conread position: 165-422
Cow position: chr18:38348534-38348790 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 96

Conread position: 165-422
Cow position: chr18:51022572-51022829 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 97

Conread position: 165-549
Cow position: chr18:56481002-56481372 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 87

Conread position: 165-641
Cow position: chr18:30693394-30692933 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-650
Cow position: chr18:21715949-21716420 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 21

Conread position: 166-638
Cow position: chr18:24145642-24146117 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 95

Conread position: 167-394
Cow position: chr18:43488237-43488011 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 151, 96

Conread position: 167-396
Cow position: chr18:8912453-8912225 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 89

Conread position: 167-396
Cow position: chr18:39936001-39936230 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 88

Conread position: 167-422
Cow position: chr18:33972269-33972530 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 99

Conread position: 171-422
Cow position: chr18:44005637-44005385 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 85

Conread position: 175-396
Cow position: chr18:17319706-17319485 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 83

Conread position: 175-655
Cow position: chr18:53534096-53534559 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 68

Conread position: 185-655
Cow position: chr18:42160952-42160480 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 76

Conread position: 191-638
Cow position: chr18:54120814-54120372 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 70

Conread position: 194-571
Cow position: chr18:22168239-22168621 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 7

Conread position: 202-418
Cow position: chr18:11919660-11919447 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 170
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 198, 59

Conread position: 203-405
Cow position: chr18:43797605-43797804 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 115, 19

Conread position: 223-662
Cow position: chr18:13702761-13702327 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 308
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 16, 39

Conread position: 259-398
Cow position: chr18:7114784-7114645 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 118

Show alignments to all cow chromosomes.