Cow genome map
Conread name: | Thy1-THY010074B02 |
Conread position: | 148-396 |
Cow position: | chr18:13727550-13727792 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 170, 13 |
Conread position: | 153-641 |
Cow position: | chr18:42834564-42834089 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 106 |
Conread position: | 154-396 |
Cow position: | chr18:14247054-14246819 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 105 |
Conread position: | 158-408 |
Cow position: | chr18:37709594-37709342 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 192 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 103, 123 |
Conread position: | 161-396 |
Cow position: | chr18:6808594-6808359 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 97 |
Conread position: | 161-418 |
Cow position: | chr18:1176626-1176373 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 15 |
Conread position: | 162-398 |
Cow position: | chr18:20220590-20220358 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 68 |
Conread position: | 163-301 |
Cow position: | chr18:27827326-27827461 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 163-396 |
Cow position: | chr18:39683276-39683508 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 95 |
Conread position: | 164-682 |
Cow position: | chr18:29268582-29268091 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 30 |
Conread position: | 165-285 |
Cow position: | chr18:1971073-1971190 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 98 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 165-318 |
Cow position: | chr18:43134726-43134575 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 131 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 165-356 |
Cow position: | chr18:1517941-1518127 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 148 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 152, 21 |
Conread position: | 165-394 |
Cow position: | chr18:17321141-17321372 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 180 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 17, 44 |
Conread position: | 165-394 |
Cow position: | chr18:40702897-40703119 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr18:464457-464671 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 167 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 165-396 |
Cow position: | chr18:6087607-6087837 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr18:18470688-18470461 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 178 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 151, 52 |
Conread position: | 165-396 |
Cow position: | chr18:22257196-22256966 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr18:30973543-30973773 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr18:32793676-32793447 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr18:40060447-40060677 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr18:54127700-54127474 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 97 |
Conread position: | 165-398 |
Cow position: | chr18:17339656-17339425 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 38 |
Conread position: | 165-399 |
Cow position: | chr18:24230703-24230469 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 98 |
Conread position: | 165-401 |
Cow position: | chr18:17311292-17311065 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 17, 36 |
Conread position: | 165-422 |
Cow position: | chr18:38348534-38348790 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 96 |
Conread position: | 165-422 |
Cow position: | chr18:51022572-51022829 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 97 |
Conread position: | 165-549 |
Cow position: | chr18:56481002-56481372 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 87 |
Conread position: | 165-641 |
Cow position: | chr18:30693394-30692933 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-650 |
Cow position: | chr18:21715949-21716420 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 21 |
Conread position: | 166-638 |
Cow position: | chr18:24145642-24146117 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 95 |
Conread position: | 167-394 |
Cow position: | chr18:43488237-43488011 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 173 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 151, 96 |
Conread position: | 167-396 |
Cow position: | chr18:8912453-8912225 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 89 |
Conread position: | 167-396 |
Cow position: | chr18:39936001-39936230 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 88 |
Conread position: | 167-422 |
Cow position: | chr18:33972269-33972530 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 99 |
Conread position: | 171-422 |
Cow position: | chr18:44005637-44005385 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 85 |
Conread position: | 175-396 |
Cow position: | chr18:17319706-17319485 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 83 |
Conread position: | 175-655 |
Cow position: | chr18:53534096-53534559 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 68 |
Conread position: | 185-655 |
Cow position: | chr18:42160952-42160480 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 76 |
Conread position: | 191-638 |
Cow position: | chr18:54120814-54120372 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 70 |
Conread position: | 194-571 |
Cow position: | chr18:22168239-22168621 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 7 |
Conread position: | 202-418 |
Cow position: | chr18:11919660-11919447 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 170 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 198, 59 |
Conread position: | 203-405 |
Cow position: | chr18:43797605-43797804 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 155 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 115, 19 |
Conread position: | 223-662 |
Cow position: | chr18:13702761-13702327 (view UCSC Genome Browser custom track) |
Alignm length: | 457 |
Alignm identity: | 308 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 16, 39 |
Conread position: | 259-398 |
Cow position: | chr18:7114784-7114645 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 55, 118 |
Show alignments to all cow chromosomes.