Cow genome map
Conread name: | Thy1-THY010074B02 |
Conread position: | 145-401 |
Cow position: | chr19:11241601-11241346 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 9 |
Conread position: | 155-373 |
Cow position: | chr19:37277185-37276968 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 85 |
Conread position: | 160-656 |
Cow position: | chr19:52332420-52332919 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 98 |
Conread position: | 161-422 |
Cow position: | chr19:11111757-11112019 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 157, 100 |
Conread position: | 162-548 |
Cow position: | chr19:21125655-21125279 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 158, 99 |
Conread position: | 163-396 |
Cow position: | chr19:3930381-3930159 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 155, 27 |
Conread position: | 163-396 |
Cow position: | chr19:28446656-28446427 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 179 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 155, 95 |
Conread position: | 163-396 |
Cow position: | chr19:28608913-28608682 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 99 |
Conread position: | 163-396 |
Cow position: | chr19:50658043-50657813 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 95 |
Conread position: | 163-418 |
Cow position: | chr19:50550533-50550280 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 19 |
Conread position: | 164-284 |
Cow position: | chr19:27838477-27838595 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 46, 69 |
Conread position: | 164-394 |
Cow position: | chr19:47874784-47874555 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 94 |
Conread position: | 164-396 |
Cow position: | chr19:19008243-19008010 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 183 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 20, 88 |
Conread position: | 164-396 |
Cow position: | chr19:30242591-30242361 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 182 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 20, 86 |
Conread position: | 164-396 |
Cow position: | chr19:33257679-33257910 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 94 |
Conread position: | 164-398 |
Cow position: | chr19:35641266-35641033 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 94 |
Conread position: | 164-405 |
Cow position: | chr19:6476713-6476940 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 164-422 |
Cow position: | chr19:45585386-45585645 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 94 |
Conread position: | 164-637 |
Cow position: | chr19:28469167-28469629 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 38 |
Conread position: | 165-293 |
Cow position: | chr19:13221367-13221493 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 109 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 165-296 |
Cow position: | chr19:7647784-7647913 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 109 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 93, 0 |
Conread position: | 165-389 |
Cow position: | chr19:6471771-6471997 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 166 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 119, 93 |
Conread position: | 165-394 |
Cow position: | chr19:27828292-27828518 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 67 |
Conread position: | 165-396 |
Cow position: | chr19:7700349-7700580 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 16 |
Conread position: | 165-396 |
Cow position: | chr19:7715128-7714898 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 93 |
Conread position: | 165-396 |
Cow position: | chr19:8550961-8551191 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-396 |
Cow position: | chr19:14380377-14380147 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 93 |
Conread position: | 165-396 |
Cow position: | chr19:27823674-27823903 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 91 |
Conread position: | 165-396 |
Cow position: | chr19:28436889-28437118 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 179 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 42, 94 |
Conread position: | 165-396 |
Cow position: | chr19:28945054-28944829 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 93 |
Conread position: | 165-396 |
Cow position: | chr19:30251597-30251366 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 183 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 13, 87 |
Conread position: | 165-396 |
Cow position: | chr19:34066334-34066105 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 16 |
Conread position: | 165-396 |
Cow position: | chr19:43435185-43434957 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 155, 76 |
Conread position: | 165-396 |
Cow position: | chr19:50677448-50677676 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-401 |
Cow position: | chr19:39753585-39753351 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 16 |
Conread position: | 165-405 |
Cow position: | chr19:42246049-42246287 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 93 |
Conread position: | 165-408 |
Cow position: | chr19:43751084-43750840 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 94 |
Conread position: | 165-410 |
Cow position: | chr19:2939378-2939612 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 190 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 153, 84 |
Conread position: | 165-637 |
Cow position: | chr19:38055192-38055653 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 96 |
Conread position: | 166-396 |
Cow position: | chr19:13227505-13227734 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 92 |
Conread position: | 166-504 |
Cow position: | chr19:30263423-30263756 (view UCSC Genome Browser custom track) |
Alignm length: | 350 |
Alignm identity: | 253 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 81, 20 |
Conread position: | 167-389 |
Cow position: | chr19:35616559-35616341 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 169 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 151, 91 |
Conread position: | 167-394 |
Cow position: | chr19:6486068-6485853 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 176 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 167-396 |
Cow position: | chr19:42155898-42155670 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 89 |
Conread position: | 168-398 |
Cow position: | chr19:53640313-53640090 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 172 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 155, 29 |
Conread position: | 172-641 |
Cow position: | chr19:11209683-11210142 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 80 |
Conread position: | 177-396 |
Cow position: | chr19:14480156-14480374 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 81 |
Conread position: | 191-650 |
Cow position: | chr19:11978668-11979118 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 71 |
Conread position: | 193-655 |
Cow position: | chr19:53533806-53533349 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 209, 68 |
Conread position: | 200-499 |
Cow position: | chr19:8824201-8823907 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 211, 58 |
Conread position: | 202-396 |
Cow position: | chr19:33082157-33082350 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 156 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 118, 59 |
Conread position: | 202-505 |
Cow position: | chr19:24985878-24986174 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 38 |
Conread position: | 206-396 |
Cow position: | chr19:12053751-12053562 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 154 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 112, 56 |
Conread position: | 206-396 |
Cow position: | chr19:12066841-12067030 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 157 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 32, 38 |
Conread position: | 208-505 |
Cow position: | chr19:2011755-2011468 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 54 |
Show alignments to all cow chromosomes.