Cow genome map

Conread name: Thy1-THY010074B02

Conread position: 145-401
Cow position: chr19:11241601-11241346 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 9

Conread position: 155-373
Cow position: chr19:37277185-37276968 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 85

Conread position: 160-656
Cow position: chr19:52332420-52332919 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 98

Conread position: 161-422
Cow position: chr19:11111757-11112019 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 100

Conread position: 162-548
Cow position: chr19:21125655-21125279 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 99

Conread position: 163-396
Cow position: chr19:3930381-3930159 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 155, 27

Conread position: 163-396
Cow position: chr19:28446656-28446427 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 155, 95

Conread position: 163-396
Cow position: chr19:28608913-28608682 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 99

Conread position: 163-396
Cow position: chr19:50658043-50657813 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 95

Conread position: 163-418
Cow position: chr19:50550533-50550280 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 19

Conread position: 164-284
Cow position: chr19:27838477-27838595 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 46, 69

Conread position: 164-394
Cow position: chr19:47874784-47874555 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-396
Cow position: chr19:19008243-19008010 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 88

Conread position: 164-396
Cow position: chr19:30242591-30242361 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 86

Conread position: 164-396
Cow position: chr19:33257679-33257910 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-398
Cow position: chr19:35641266-35641033 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 94

Conread position: 164-405
Cow position: chr19:6476713-6476940 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 164-422
Cow position: chr19:45585386-45585645 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-637
Cow position: chr19:28469167-28469629 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 38

Conread position: 165-293
Cow position: chr19:13221367-13221493 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 109
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 93, 0

Conread position: 165-296
Cow position: chr19:7647784-7647913 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 165-389
Cow position: chr19:6471771-6471997 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 93

Conread position: 165-394
Cow position: chr19:27828292-27828518 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 67

Conread position: 165-396
Cow position: chr19:7700349-7700580 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 16

Conread position: 165-396
Cow position: chr19:7715128-7714898 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 93

Conread position: 165-396
Cow position: chr19:8550961-8551191 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr19:14380377-14380147 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 93

Conread position: 165-396
Cow position: chr19:27823674-27823903 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 91

Conread position: 165-396
Cow position: chr19:28436889-28437118 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 94

Conread position: 165-396
Cow position: chr19:28945054-28944829 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 93

Conread position: 165-396
Cow position: chr19:30251597-30251366 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 13, 87

Conread position: 165-396
Cow position: chr19:34066334-34066105 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 16

Conread position: 165-396
Cow position: chr19:43435185-43434957 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 76

Conread position: 165-396
Cow position: chr19:50677448-50677676 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-401
Cow position: chr19:39753585-39753351 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 16

Conread position: 165-405
Cow position: chr19:42246049-42246287 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-408
Cow position: chr19:43751084-43750840 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 94

Conread position: 165-410
Cow position: chr19:2939378-2939612 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 153, 84

Conread position: 165-637
Cow position: chr19:38055192-38055653 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 96

Conread position: 166-396
Cow position: chr19:13227505-13227734 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 92

Conread position: 166-504
Cow position: chr19:30263423-30263756 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 253
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 81, 20

Conread position: 167-389
Cow position: chr19:35616559-35616341 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 151, 91

Conread position: 167-394
Cow position: chr19:6486068-6485853 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 176
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 0

Conread position: 167-396
Cow position: chr19:42155898-42155670 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 89

Conread position: 168-398
Cow position: chr19:53640313-53640090 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 155, 29

Conread position: 172-641
Cow position: chr19:11209683-11210142 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 80

Conread position: 177-396
Cow position: chr19:14480156-14480374 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 81

Conread position: 191-650
Cow position: chr19:11978668-11979118 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 71

Conread position: 193-655
Cow position: chr19:53533806-53533349 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 68

Conread position: 200-499
Cow position: chr19:8824201-8823907 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 58

Conread position: 202-396
Cow position: chr19:33082157-33082350 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 118, 59

Conread position: 202-505
Cow position: chr19:24985878-24986174 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 38

Conread position: 206-396
Cow position: chr19:12053751-12053562 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 112, 56

Conread position: 206-396
Cow position: chr19:12066841-12067030 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 157
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 32, 38

Conread position: 208-505
Cow position: chr19:2011755-2011468 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 54

Show alignments to all cow chromosomes.