Cow genome map


           Conread name:
           Thy1-THY010074B02
        

               Conread position:
               145-401
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               155-373
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 85
               

               Conread position:
               160-656
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 98
               

               Conread position:
               161-422
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 100
               

               Conread position:
               162-548
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 99
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               155, 27
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-418
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 19
               

               Conread position:
               164-284
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               164-394
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 88
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 94
               

               Conread position:
               164-405
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               164-422
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-637
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 38
               

               Conread position:
               165-293
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-296
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-389
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               119, 93
               

               Conread position:
               165-394
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 67
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 16
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 91
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               42, 94
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 16
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 76
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 16
               

               Conread position:
               165-405
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 94
               

               Conread position:
               165-410
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               153, 84
               

               Conread position:
               165-637
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 96
               

               Conread position:
               166-396
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 92
               

               Conread position:
               166-504
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               167-389
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               167-394
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 89
               

               Conread position:
               168-398
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               172-641
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 80
               

               Conread position:
               177-396
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               191-650
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 71
               

               Conread position:
               193-655
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 68
               

               Conread position:
               200-499
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 58
               

               Conread position:
               202-396
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               156
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               118, 59
               

               Conread position:
               202-505
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 38
               

               Conread position:
               206-396
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               112, 56
               

               Conread position:
               206-396
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               157
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               208-505
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 54
               
Show alignments to all cow chromosomes.