Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 67-396 |
| Cow position: | chr21:22204970-22205301 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 70 |
| Conread position: | 147-398 |
| Cow position: | chr21:17928362-17928618 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 156-308 |
| Cow position: | chr21:36772323-36772474 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 160-398 |
| Cow position: | chr21:26194152-26193915 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 33, 68 |
| Conread position: | 162-398 |
| Cow position: | chr21:3477669-3477433 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 162-418 |
| Cow position: | chr21:36011103-36010847 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 162-641 |
| Cow position: | chr21:36215339-36215812 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 163-396 |
| Cow position: | chr21:11730727-11730947 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 122, 84 |
| Conread position: | 163-396 |
| Cow position: | chr21:40223595-40223364 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 83 |
| Conread position: | 164-408 |
| Cow position: | chr21:18599751-18599507 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 94 |
| Conread position: | 164-637 |
| Cow position: | chr21:3625444-3624991 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 164-662 |
| Cow position: | chr21:47956798-47956307 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 38 |
| Conread position: | 165-277 |
| Cow position: | chr21:21033877-21033767 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 165-381 |
| Cow position: | chr21:12632825-12633039 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-394 |
| Cow position: | chr21:38255886-38255675 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 153, 45 |
| Conread position: | 165-395 |
| Cow position: | chr21:8163199-8162985 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 165-396 |
| Cow position: | chr21:14749152-14748922 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr21:24815950-24816180 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr21:31483852-31483622 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr21:32448817-32448587 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-399 |
| Cow position: | chr21:1268737-1268508 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 65 |
| Conread position: | 165-405 |
| Cow position: | chr21:47964425-47964186 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 93 |
| Conread position: | 165-423 |
| Cow position: | chr21:12193921-12193662 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-481 |
| Cow position: | chr21:395188-394878 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 33 |
| Conread position: | 165-500 |
| Cow position: | chr21:2944152-2944489 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 93 |
| Conread position: | 165-656 |
| Cow position: | chr21:22117381-22117872 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 167-382 |
| Cow position: | chr21:32418857-32418643 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 167-641 |
| Cow position: | chr21:6392673-6392218 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 91 |
| Conread position: | 172-396 |
| Cow position: | chr21:31768454-31768232 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 78 |
| Conread position: | 174-395 |
| Cow position: | chr21:7172499-7172281 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 126, 63 |
| Conread position: | 175-650 |
| Cow position: | chr21:20591757-20591264 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 341 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 140, 70 |
| Conread position: | 180-444 |
| Cow position: | chr21:11161291-11161027 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 10 |
| Conread position: | 183-440 |
| Cow position: | chr21:21739235-21738982 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 135, 78 |
| Conread position: | 207-370 |
| Cow position: | chr21:11670521-11670370 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 211-396 |
| Cow position: | chr21:41562623-41562439 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 151 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 107, 50 |
Show alignments to all cow chromosomes.