Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 157-318 |
| Cow position: | chr22:44053468-44053308 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 159-282 |
| Cow position: | chr22:5711532-5711410 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 162-636 |
| Cow position: | chr22:35969307-35968800 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 100 |
| Conread position: | 163-284 |
| Cow position: | chr22:30812797-30812919 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 97 |
| Conread position: | 163-396 |
| Cow position: | chr22:18718668-18718900 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 163-396 |
| Cow position: | chr22:43894125-43894356 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 83 |
| Conread position: | 163-398 |
| Cow position: | chr22:20082486-20082254 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 47 |
| Conread position: | 163-408 |
| Cow position: | chr22:26779284-26779044 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 23 |
| Conread position: | 163-427 |
| Cow position: | chr22:4616444-4616178 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 95 |
| Conread position: | 164-396 |
| Cow position: | chr22:10037030-10037261 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr22:10518565-10518337 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 154, 19 |
| Conread position: | 164-396 |
| Cow position: | chr22:15674200-15673968 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 164-396 |
| Cow position: | chr22:27427306-27427537 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 164-398 |
| Cow position: | chr22:3148337-3148570 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-422 |
| Cow position: | chr22:5453274-5453018 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 33 |
| Conread position: | 165-358 |
| Cow position: | chr22:33632608-33632797 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 165-390 |
| Cow position: | chr22:4331557-4331333 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 91 |
| Conread position: | 165-391 |
| Cow position: | chr22:14230533-14230762 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 165-393 |
| Cow position: | chr22:15698652-15698425 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 33 |
| Conread position: | 165-393 |
| Cow position: | chr22:29382570-29382343 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 91 |
| Conread position: | 165-394 |
| Cow position: | chr22:14243024-14242812 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 165-396 |
| Cow position: | chr22:4041016-4041244 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 154, 47 |
| Conread position: | 165-396 |
| Cow position: | chr22:7804902-7804672 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr22:12229603-12229833 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr22:12449648-12449878 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr22:20048699-20048471 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 165-396 |
| Cow position: | chr22:39718848-39718618 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-505 |
| Cow position: | chr22:23412252-23412606 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 165-654 |
| Cow position: | chr22:26720560-26720071 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 97 |
| Conread position: | 166-396 |
| Cow position: | chr22:41848372-41848601 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 92 |
| Conread position: | 168-398 |
| Cow position: | chr22:43703818-43703589 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 90 |
| Conread position: | 171-396 |
| Cow position: | chr22:5454269-5454044 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 190-408 |
| Cow position: | chr22:1684824-1684605 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 246-394 |
| Cow position: | chr22:26920842-26920695 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 15 |
| Conread position: | 258-422 |
| Cow position: | chr22:6704862-6705031 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 340-506 |
| Cow position: | chr22:9548875-9548707 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 97 |
| Conread position: | 341-505 |
| Cow position: | chr22:5711384-5711219 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 110, 90 |
| Conread position: | 422-650 |
| Cow position: | chr22:33632826-33633058 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 36, 13 |
Show alignments to all cow chromosomes.