Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 153-396 |
| Cow position: | chr24:7036374-7036610 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 165, 64 |
| Conread position: | 158-343 |
| Cow position: | chr24:37289016-37288832 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 101 |
| Conread position: | 158-658 |
| Cow position: | chr24:39408355-39408857 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 46 |
| Conread position: | 160-396 |
| Cow position: | chr24:2129538-2129772 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 82 |
| Conread position: | 161-399 |
| Cow position: | chr24:37853410-37853173 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 90 |
| Conread position: | 161-421 |
| Cow position: | chr24:41236696-41236437 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 97 |
| Conread position: | 162-396 |
| Cow position: | chr24:12030962-12030729 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 162-398 |
| Cow position: | chr24:11650588-11650354 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 163-396 |
| Cow position: | chr24:16572168-16571940 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 164-259 |
| Cow position: | chr24:31037562-31037657 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-394 |
| Cow position: | chr24:43937005-43936778 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 71 |
| Conread position: | 164-396 |
| Cow position: | chr24:13307295-13307526 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-408 |
| Cow position: | chr24:42654530-42654286 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-422 |
| Cow position: | chr24:31491210-31490954 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 56 |
| Conread position: | 164-641 |
| Cow position: | chr24:5922070-5922537 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 165-392 |
| Cow position: | chr24:26660910-26661135 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 62 |
| Conread position: | 165-396 |
| Cow position: | chr24:5545336-5545113 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:5909561-5909791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:5911002-5911232 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:5915611-5915841 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:9281676-9281449 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 165-396 |
| Cow position: | chr24:14077740-14077970 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:16979037-16979267 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:30564637-30564400 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 103 |
| Conread position: | 165-396 |
| Cow position: | chr24:38661487-38661256 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr24:42977036-42977264 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 48 |
| Conread position: | 165-398 |
| Cow position: | chr24:45164418-45164193 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 155, 35 |
| Conread position: | 165-399 |
| Cow position: | chr24:6198517-6198284 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-442 |
| Cow position: | chr24:18565964-18566235 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 93 |
| Conread position: | 165-641 |
| Cow position: | chr24:33074607-33074122 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 37 |
| Conread position: | 166-399 |
| Cow position: | chr24:39199112-39199343 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 36 |
| Conread position: | 167-394 |
| Cow position: | chr24:8672567-8672794 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 167-396 |
| Cow position: | chr24:25914745-25914973 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 168-369 |
| Cow position: | chr24:35050714-35050913 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 150, 44 |
| Conread position: | 168-395 |
| Cow position: | chr24:33115964-33115738 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 90 |
| Conread position: | 174-286 |
| Cow position: | chr24:23789097-23788989 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 180-449 |
| Cow position: | chr24:10796975-10797235 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 140, 46 |
| Conread position: | 191-396 |
| Cow position: | chr24:8350283-8350485 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 57 |
| Conread position: | 202-422 |
| Cow position: | chr24:20029506-20029721 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 198, 20 |
| Conread position: | 203-396 |
| Cow position: | chr24:22615956-22615765 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 115, 53 |
| Conread position: | 210-394 |
| Cow position: | chr24:10480950-10481115 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 48 |
| Conread position: | 239-425 |
| Cow position: | chr24:26694838-26695023 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 22 |
| Conread position: | 260-649 |
| Cow position: | chr24:31669544-31669169 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 262-506 |
| Cow position: | chr24:7778852-7778611 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 70 |
Show alignments to all cow chromosomes.