Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 152-348 |
| Cow position: | chr29:1749192-1748996 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 159-421 |
| Cow position: | chr29:1548206-1547942 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 156, 24 |
| Conread position: | 160-396 |
| Cow position: | chr29:6147027-6147263 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 99 |
| Conread position: | 162-308 |
| Cow position: | chr29:28762-28904 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 163-655 |
| Cow position: | chr29:35767634-35767153 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 95 |
| Conread position: | 164-328 |
| Cow position: | chr29:32570414-32570249 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 96 |
| Conread position: | 164-363 |
| Cow position: | chr29:23476042-23475844 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr29:40312677-40312909 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-398 |
| Cow position: | chr29:29943741-29943974 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 165-382 |
| Cow position: | chr29:35764753-35764967 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 145, 72 |
| Conread position: | 165-395 |
| Cow position: | chr29:38372085-38372314 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:592800-593030 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:5099336-5099566 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:5928299-5928076 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 165-396 |
| Cow position: | chr29:11403458-11403232 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:17348714-17348485 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:20302172-20301942 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:22103456-22103226 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr29:31821728-31821953 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 165-396 |
| Cow position: | chr29:31859732-31859501 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 97 |
| Conread position: | 165-396 |
| Cow position: | chr29:39006445-39006672 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 91 |
| Conread position: | 165-396 |
| Cow position: | chr29:42987021-42986792 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 44 |
| Conread position: | 165-398 |
| Cow position: | chr29:13860126-13860350 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 154, 93 |
| Conread position: | 165-429 |
| Cow position: | chr29:24138028-24137765 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 165-655 |
| Cow position: | chr29:12168321-12168811 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 85 |
| Conread position: | 165-661 |
| Cow position: | chr29:5150419-5149912 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 165-662 |
| Cow position: | chr29:3348489-3347999 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 93 |
| Conread position: | 166-396 |
| Cow position: | chr29:23374931-23375160 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 92 |
| Conread position: | 168-317 |
| Cow position: | chr29:28693095-28692948 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 170-398 |
| Cow position: | chr29:34569032-34569261 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 92 |
| Conread position: | 183-309 |
| Cow position: | chr29:28988693-28988816 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 202-397 |
| Cow position: | chr29:10464325-10464133 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 203-396 |
| Cow position: | chr29:28846769-28846577 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 58 |
| Conread position: | 205-394 |
| Cow position: | chr29:1346524-1346335 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 56 |
| Conread position: | 219-654 |
| Cow position: | chr29:17450760-17450321 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 222-373 |
| Cow position: | chr29:3208351-3208500 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 242-396 |
| Cow position: | chr29:8430331-8430484 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 390-657 |
| Cow position: | chr29:35329440-35329712 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 6, 72 |
Show alignments to all cow chromosomes.