Cow genome map

Conread name: Thy1-THY010074B02

Conread position: 123-349
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 136

Conread position: 146-324
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 45

Conread position: 150-396
Cow position:
Alignm length: 251
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 155-396
Cow position:
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 105

Conread position: 156-650
Cow position:
Alignm length: 505
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 40

Conread position: 156-652
Cow position:
Alignm length: 511
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 46

Conread position: 158-396
Cow position:
Alignm length: 240
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 100

Conread position: 159-284
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 7, 100

Conread position: 160-373
Cow position:
Alignm length: 216
Alignm identity: 167
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 7, 23

Conread position: 160-396
Cow position:
Alignm length: 238
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 98

Conread position: 160-480
Cow position:
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 97

Conread position: 161-396
Cow position:
Alignm length: 238
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 98

Conread position: 162-397
Cow position:
Alignm length: 237
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 34

Conread position: 162-398
Cow position:
Alignm length: 238
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 82

Conread position: 162-422
Cow position:
Alignm length: 265
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 97

Conread position: 163-391
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 155, 18

Conread position: 163-396
Cow position:
Alignm length: 235
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 95

Conread position: 163-396
Cow position:
Alignm length: 235
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 95

Conread position: 163-396
Cow position:
Alignm length: 235
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 54

Conread position: 163-398
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 93

Conread position: 164-318
Cow position:
Alignm length: 159
Alignm identity: 129
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 128, 94

Conread position: 164-328
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 154, 94

Conread position: 164-375
Cow position:
Alignm length: 213
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 73

Conread position: 164-394
Cow position:
Alignm length: 232
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 17

Conread position: 164-396
Cow position:
Alignm length: 234
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 74

Conread position: 164-396
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 164-396
Cow position:
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 74

Conread position: 164-396
Cow position:
Alignm length: 234
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-396
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-396
Cow position:
Alignm length: 234
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 97

Conread position: 164-399
Cow position:
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 95

Conread position: 164-410
Cow position:
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-650
Cow position:
Alignm length: 497
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 19

Conread position: 165-289
Cow position:
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 165-314
Cow position:
Alignm length: 150
Alignm identity: 125
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 165-385
Cow position:
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 35

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 94

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 22, 94

Conread position: 165-396
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 93

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 96

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position:
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position:
Alignm length: 232
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position:
Alignm length: 236
Alignm identity: 180
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 19, 98

Conread position: 165-396
Cow position:
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-398
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 153, 93

Conread position: 165-398
Cow position:
Alignm length: 235
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 16

Conread position: 165-398
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 153, 93

Conread position: 165-399
Cow position:
Alignm length: 236
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 16

Conread position: 165-401
Cow position:
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 93

Conread position: 165-401
Cow position:
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-405
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 94

Conread position: 165-405
Cow position:
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 165-408
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 91

Conread position: 165-422
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 67

Conread position: 165-430
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 91

Conread position: 165-637
Cow position:
Alignm length: 486
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 96

Conread position: 165-652
Cow position:
Alignm length: 502
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 59

Conread position: 165-655
Cow position:
Alignm length: 507
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 97

Conread position: 165-667
Cow position:
Alignm length: 516
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 90

Conread position: 166-396
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 39, 17

Conread position: 166-396
Cow position:
Alignm length: 232
Alignm identity: 179
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 154, 92

Conread position: 166-396
Cow position:
Alignm length: 232
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 92

Conread position: 166-410
Cow position:
Alignm length: 248
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 32

Conread position: 167-396
Cow position:
Alignm length: 231
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 91

Conread position: 167-651
Cow position:
Alignm length: 506
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 95

Conread position: 168-422
Cow position:
Alignm length: 258
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 94

Conread position: 171-447
Cow position:
Alignm length: 278
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 88

Conread position: 172-389
Cow position:
Alignm length: 219
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 86

Conread position: 172-657
Cow position:
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 28

Conread position: 174-396
Cow position:
Alignm length: 224
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 84

Conread position: 175-296
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 177-494
Cow position:
Alignm length: 323
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 52

Conread position: 177-641
Cow position:
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 84

Conread position: 180-485
Cow position:
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 73

Conread position: 186-396
Cow position:
Alignm length: 212
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 72

Conread position: 188-661
Cow position:
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 203-447
Cow position:
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 58

Conread position: 203-656
Cow position:
Alignm length: 471
Alignm identity: 310
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 115, 58

Conread position: 246-394
Cow position:
Alignm length: 150
Alignm identity: 122
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 72, 15

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 268-655
Cow position:
Alignm length: 396
Alignm identity: 272
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 50, 26

Show alignments to all cow chromosomes.