Cow genome map

Conread name: Thy1-THY010074B02

Conread position: 152-651
Cow position: chr6:32521834-32522335 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 108

Conread position: 161-314
Cow position: chr6:4816951-4817100 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 161-389
Cow position: chr6:5075013-5074786 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 162-505
Cow position: chr6:4149973-4149628 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 94

Conread position: 163-257
Cow position: chr6:38653549-38653643 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 163-396
Cow position: chr6:7870697-7870929 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 95

Conread position: 163-396
Cow position: chr6:22875346-22875575 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 95

Conread position: 163-396
Cow position: chr6:44691757-44691525 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 95

Conread position: 163-396
Cow position: chr6:50350281-50350514 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 91

Conread position: 163-422
Cow position: chr6:67428924-67428668 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 18

Conread position: 164-396
Cow position: chr6:19261212-19261447 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 17

Conread position: 164-396
Cow position: chr6:20532913-20532693 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 156, 94

Conread position: 164-396
Cow position: chr6:23898163-23898394 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-396
Cow position: chr6:23904339-23904570 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-396
Cow position: chr6:48724608-48724377 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-396
Cow position: chr6:60865844-60866075 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-494
Cow position: chr6:22816833-22817146 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 19

Conread position: 164-637
Cow position: chr6:2597803-2597345 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 94

Conread position: 164-644
Cow position: chr6:57793702-57794172 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 97

Conread position: 164-648
Cow position: chr6:26939886-26939412 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 88

Conread position: 165-394
Cow position: chr6:54538596-54538823 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 153, 96

Conread position: 165-396
Cow position: chr6:104187-104417 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:2981599-2981824 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 29

Conread position: 165-396
Cow position: chr6:2982582-2982351 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 97

Conread position: 165-396
Cow position: chr6:7527858-7528095 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 9, 85

Conread position: 165-396
Cow position: chr6:36675191-36674961 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:36923103-36923333 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:36924374-36924144 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:44459917-44460146 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:48025326-48025556 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:49756894-49756665 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:52418918-52418688 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 93

Conread position: 165-396
Cow position: chr6:52961887-52962111 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 25

Conread position: 165-396
Cow position: chr6:65680292-65680063 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 96

Conread position: 165-398
Cow position: chr6:42768526-42768746 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 153, 94

Conread position: 165-398
Cow position: chr6:61409111-61409343 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 97

Conread position: 165-401
Cow position: chr6:23212983-23212750 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 72

Conread position: 165-405
Cow position: chr6:59689445-59689206 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 91

Conread position: 165-408
Cow position: chr6:19041870-19042114 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 165-571
Cow position: chr6:15034859-15035261 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 165-637
Cow position: chr6:66256286-66255816 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 67

Conread position: 165-641
Cow position: chr6:3661416-3660950 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 93

Conread position: 165-655
Cow position: chr6:39448763-39449245 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 155, 58

Conread position: 167-363
Cow position: chr6:15236356-15236540 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 151, 65

Conread position: 167-398
Cow position: chr6:53430603-53430832 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 94

Conread position: 167-664
Cow position: chr6:61434722-61435219 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 55

Conread position: 171-655
Cow position: chr6:26246054-26245551 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 40

Conread position: 193-396
Cow position: chr6:46533364-46533163 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 68

Conread position: 197-422
Cow position: chr6:55522521-55522295 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 121, 65

Conread position: 202-398
Cow position: chr6:2159312-2159117 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 116, 59

Conread position: 223-396
Cow position: chr6:16554862-16554690 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 97, 38

Conread position: 237-650
Cow position: chr6:49411757-49412172 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 288
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 68, 24

Conread position: 252-641
Cow position: chr6:55844079-55843701 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 162

Conread position: 369-500
Cow position: chr6:69359865-69360001 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 67

Show alignments to all cow chromosomes.