Cow genome map


           Conread name:
           Thy1-THY010074B02
        

               Conread position:
               137-396
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               142-396
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 118
               

               Conread position:
               152-396
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 106
               

               Conread position:
               157-330
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 82
               

               Conread position:
               161-318
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               161-394
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 97
               

               Conread position:
               162-395
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 96
               

               Conread position:
               162-396
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 96
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 101
               

               Conread position:
               163-396
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               163-503
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 95
               

               Conread position:
               164-337
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-395
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 68
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 75
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               164-398
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 94
               

               Conread position:
               164-405
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 93
               

               Conread position:
               164-652
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 98
               

               Conread position:
               165-280
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-323
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               153, 16
               

               Conread position:
               165-373
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               79, 94
               

               Conread position:
               165-394
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 87
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               18, 89
               

               Conread position:
               165-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               165-398
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 96
               

               Conread position:
               165-399
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 96
               

               Conread position:
               165-401
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 93
               

               Conread position:
               165-407
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               165-408
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               38, 57
               

               Conread position:
               165-505
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 53
               

               Conread position:
               165-505
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 96
               

               Conread position:
               165-641
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               165-651
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 93
               

               Conread position:
               165-655
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 36
               

               Conread position:
               165-656
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 60
               

               Conread position:
               165-661
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 93
               

               Conread position:
               166-396
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               166-555
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               56, 96
               

               Conread position:
               166-641
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 90
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               175
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               148, 47
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               167-396
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 91
               

               Conread position:
               168-410
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               177-396
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 81
               

               Conread position:
               183-396
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               191-398
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               191-401
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               129, 8
               

               Conread position:
               208-398
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               110, 53
               

               Conread position:
               214-396
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               105, 47
               

               Conread position:
               230-396
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               259-398
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               63, 115
               
Show alignments to all cow chromosomes.