Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 137-396 |
| Cow position: | chr7:3664721-3664463 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 102 |
| Conread position: | 142-396 |
| Cow position: | chr7:8254408-8254154 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 118 |
| Conread position: | 152-396 |
| Cow position: | chr7:30949674-30949919 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 106 |
| Conread position: | 157-330 |
| Cow position: | chr7:7867303-7867473 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 161-318 |
| Cow position: | chr7:14387290-14387445 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 161-394 |
| Cow position: | chr7:50562726-50562492 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 97 |
| Conread position: | 162-395 |
| Cow position: | chr7:56929579-56929811 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 162-396 |
| Cow position: | chr7:32817003-32817236 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 96 |
| Conread position: | 163-396 |
| Cow position: | chr7:3872483-3872717 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 163-396 |
| Cow position: | chr7:14318939-14319171 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 163-503 |
| Cow position: | chr7:4598317-4597991 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 164-337 |
| Cow position: | chr7:37935902-37935732 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-395 |
| Cow position: | chr7:32895847-32896064 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr7:2411381-2411612 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr7:9438134-9437901 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 68 |
| Conread position: | 164-396 |
| Cow position: | chr7:18103605-18103371 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chr7:52897461-52897234 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 75 |
| Conread position: | 164-398 |
| Cow position: | chr7:16632658-16632426 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 85 |
| Conread position: | 164-398 |
| Cow position: | chr7:18109554-18109334 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-405 |
| Cow position: | chr7:21993297-21993063 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 93 |
| Conread position: | 164-652 |
| Cow position: | chr7:61215594-61215111 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 98 |
| Conread position: | 165-280 |
| Cow position: | chr7:22790744-22790857 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 165-323 |
| Cow position: | chr7:52433798-52433954 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 153, 16 |
| Conread position: | 165-373 |
| Cow position: | chr7:49095354-49095146 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 164 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 79, 94 |
| Conread position: | 165-394 |
| Cow position: | chr7:27259568-27259804 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 165-396 |
| Cow position: | chr7:1438730-1438959 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 165-396 |
| Cow position: | chr7:6375965-6376187 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr7:8333937-8333707 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 93 |
| Conread position: | 165-396 |
| Cow position: | chr7:10726732-10726506 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 165-396 |
| Cow position: | chr7:27265194-27265424 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr7:40498211-40497982 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 87 |
| Conread position: | 165-396 |
| Cow position: | chr7:41081233-41081003 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr7:43355398-43355166 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 165-396 |
| Cow position: | chr7:66941286-66941515 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chr7:19655245-19655477 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chr7:28434291-28434056 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 42 |
| Conread position: | 165-398 |
| Cow position: | chr7:41789766-41789535 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 96 |
| Conread position: | 165-399 |
| Cow position: | chr7:6010379-6010612 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 96 |
| Conread position: | 165-401 |
| Cow position: | chr7:1846997-1846762 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 165-407 |
| Cow position: | chr7:51496997-51496752 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 165-408 |
| Cow position: | chr7:37784050-37783811 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 165-505 |
| Cow position: | chr7:10479488-10479822 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 53 |
| Conread position: | 165-505 |
| Cow position: | chr7:10906239-10906577 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 96 |
| Conread position: | 165-641 |
| Cow position: | chr7:40523415-40522950 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-651 |
| Cow position: | chr7:14861147-14861652 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 93 |
| Conread position: | 165-655 |
| Cow position: | chr7:936038-935554 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 36 |
| Conread position: | 165-656 |
| Cow position: | chr7:65172585-65172112 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 60 |
| Conread position: | 165-661 |
| Cow position: | chr7:46244452-46243962 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 166-396 |
| Cow position: | chr7:16649232-16649459 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 166-555 |
| Cow position: | chr7:50806138-50805759 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 285 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 96 |
| Conread position: | 166-641 |
| Cow position: | chr7:63711602-63711137 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 90 |
| Conread position: | 167-373 |
| Cow position: | chr7:461262-461463 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 167-396 |
| Cow position: | chr7:5993254-5993480 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 148, 47 |
| Conread position: | 167-396 |
| Cow position: | chr7:13840572-13840793 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 167-396 |
| Cow position: | chr7:42905883-42906112 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 168-410 |
| Cow position: | chr7:2992962-2993203 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 68 |
| Conread position: | 177-396 |
| Cow position: | chr7:13419787-13420004 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 81 |
| Conread position: | 183-396 |
| Cow position: | chr7:7870808-7871018 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 191-398 |
| Cow position: | chr7:61968942-61969145 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 191-401 |
| Cow position: | chr7:21992262-21992054 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 129, 8 |
| Conread position: | 208-398 |
| Cow position: | chr7:40542467-40542277 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 110, 53 |
| Conread position: | 214-396 |
| Cow position: | chr7:19665297-19665477 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 105, 47 |
| Conread position: | 230-396 |
| Cow position: | chr7:3657571-3657405 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 259-398 |
| Cow position: | chr7:16631266-16631126 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 115 |
Show alignments to all cow chromosomes.