Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 153-396 |
| Cow position: | chr9:40280110-40279872 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 160-396 |
| Cow position: | chr9:18985605-18985368 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 99 |
| Conread position: | 160-659 |
| Cow position: | chr9:7533009-7532517 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 99 |
| Conread position: | 161-317 |
| Cow position: | chr9:19261536-19261690 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 162-392 |
| Cow position: | chr9:21861200-21860971 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 96 |
| Conread position: | 163-396 |
| Cow position: | chr9:7958123-7957894 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 50 |
| Conread position: | 164-395 |
| Cow position: | chr9:4618782-4619012 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 92 |
| Conread position: | 164-396 |
| Cow position: | chr9:13539740-13539972 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 164-396 |
| Cow position: | chr9:23526458-23526228 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-398 |
| Cow position: | chr9:1892652-1892885 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-398 |
| Cow position: | chr9:6668719-6668499 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 155, 37 |
| Conread position: | 164-418 |
| Cow position: | chr9:49295940-49295692 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 165-313 |
| Cow position: | chr9:8563350-8563496 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 165-387 |
| Cow position: | chr9:14340699-14340482 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 48 |
| Conread position: | 165-394 |
| Cow position: | chr9:64598921-64599144 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 37 |
| Conread position: | 165-396 |
| Cow position: | chr9:4855822-4856049 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 155, 16 |
| Conread position: | 165-396 |
| Cow position: | chr9:6601390-6601620 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr9:7661443-7661213 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 93 |
| Conread position: | 165-396 |
| Cow position: | chr9:15529048-15529278 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr9:15817082-15816851 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 165-396 |
| Cow position: | chr9:23521185-23520956 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 35 |
| Conread position: | 165-396 |
| Cow position: | chr9:28537475-28537245 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chr9:56833114-56832892 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chr9:7841074-7841302 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 165-398 |
| Cow position: | chr9:36467301-36467534 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 165-405 |
| Cow position: | chr9:64438278-64438042 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 25 |
| Conread position: | 165-408 |
| Cow position: | chr9:15816300-15816543 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 143, 93 |
| Conread position: | 165-422 |
| Cow position: | chr9:8487050-8486792 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 165-505 |
| Cow position: | chr9:54203160-54202827 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-638 |
| Cow position: | chr9:60489746-60489272 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 91 |
| Conread position: | 167-358 |
| Cow position: | chr9:54534232-54534420 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 151, 55 |
| Conread position: | 167-405 |
| Cow position: | chr9:21516574-21516811 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 167-422 |
| Cow position: | chr9:48548529-48548275 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 65 |
| Conread position: | 174-420 |
| Cow position: | chr9:36710232-36710478 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 53 |
| Conread position: | 174-500 |
| Cow position: | chr9:10572792-10573110 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 75 |
| Conread position: | 174-651 |
| Cow position: | chr9:61331759-61332250 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 88 |
| Conread position: | 175-429 |
| Cow position: | chr9:60030527-60030270 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 8 |
| Conread position: | 183-399 |
| Cow position: | chr9:30655055-30654838 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 191-396 |
| Cow position: | chr9:19100297-19100106 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 127, 70 |
| Conread position: | 204-399 |
| Cow position: | chr9:53048466-53048660 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 116, 57 |
| Conread position: | 239-398 |
| Cow position: | chr9:10675341-10675184 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 44, 7 |
| Conread position: | 302-655 |
| Cow position: | chr9:30698368-30697997 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 130 |
Show alignments to all cow chromosomes.