Cow genome map
| Conread name: | Thy1-THY010074B02 |
| Conread position: | 145-422 |
| Cow position: | chrX:43358024-43357753 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 150-396 |
| Cow position: | chrX:15764658-15764409 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 157-637 |
| Cow position: | chrX:32753616-32753146 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 105 |
| Conread position: | 160-410 |
| Cow position: | chrX:44682172-44681921 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 161-396 |
| Cow position: | chrX:9108541-9108308 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 42, 88 |
| Conread position: | 163-315 |
| Cow position: | chrX:36053573-36053723 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 164-375 |
| Cow position: | chrX:46750923-46750713 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 164-396 |
| Cow position: | chrX:42-272 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 94 |
| Conread position: | 164-396 |
| Cow position: | chrX:2982-2752 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 164-396 |
| Cow position: | chrX:9099900-9099670 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 74 |
| Conread position: | 164-396 |
| Cow position: | chrX:16902567-16902337 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 164-396 |
| Cow position: | chrX:38748956-38749186 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 164-396 |
| Cow position: | chrX:42402759-42402989 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 164-398 |
| Cow position: | chrX:833234-833002 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 95 |
| Conread position: | 164-408 |
| Cow position: | chrX:29428702-29428936 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 236, 74 |
| Conread position: | 164-643 |
| Cow position: | chrX:823938-823458 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 98 |
| Conread position: | 164-663 |
| Cow position: | chrX:27980742-27981234 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 94 |
| Conread position: | 165-316 |
| Cow position: | chrX:29126618-29126767 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 165-329 |
| Cow position: | chrX:47120995-47121160 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 57, 92 |
| Conread position: | 165-336 |
| Cow position: | chrX:28570-28400 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-392 |
| Cow position: | chrX:25266272-25266493 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 178 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 153, 76 |
| Conread position: | 165-394 |
| Cow position: | chrX:35933810-35933580 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 93 |
| Conread position: | 165-396 |
| Cow position: | chrX:835184-834953 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chrX:9313412-9313191 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 165-396 |
| Cow position: | chrX:10749366-10749136 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-396 |
| Cow position: | chrX:23430282-23430516 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 97 |
| Conread position: | 165-396 |
| Cow position: | chrX:28868442-28868673 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 165-396 |
| Cow position: | chrX:32647506-32647276 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chrX:16795655-16795419 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 79, 98 |
| Conread position: | 165-398 |
| Cow position: | chrX:18434899-18434674 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 44 |
| Conread position: | 165-398 |
| Cow position: | chrX:28874526-28874294 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chrX:39827516-39827747 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 153, 93 |
| Conread position: | 165-398 |
| Cow position: | chrX:48236459-48236224 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 165-422 |
| Cow position: | chrX:44615643-44615901 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 145, 99 |
| Conread position: | 165-436 |
| Cow position: | chrX:34443237-34442966 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 165-601 |
| Cow position: | chrX:29531426-29531009 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 18 |
| Conread position: | 165-637 |
| Cow position: | chrX:25272409-25272873 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 96 |
| Conread position: | 167-422 |
| Cow position: | chrX:13831121-13830854 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 210 |
| Conread position: | 167-428 |
| Cow position: | chrX:45419802-45420067 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 91 |
| Conread position: | 174-505 |
| Cow position: | chrX:32754446-32754116 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 88 |
| Conread position: | 177-354 |
| Cow position: | chrX:44657167-44657336 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 177-505 |
| Cow position: | chrX:25221032-25220705 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 180-447 |
| Cow position: | chrX:8448311-8448053 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 197, 78 |
| Conread position: | 181-398 |
| Cow position: | chrX:16891337-16891547 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 137, 38 |
| Conread position: | 203-641 |
| Cow position: | chrX:4849-5285 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 39 |
| Conread position: | 217-395 |
| Cow position: | chrX:25951347-25951170 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 103, 44 |
| Conread position: | 271-396 |
| Cow position: | chrX:4543228-4543102 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.