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Cow genome map

           
Conread name:
           
Thy1-THY010079D05
        

               
Conread position:
               
96-701
               

               
Cow position:
               
chr17:20022249-20022875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 401
               

               
Conread position:
               
99-268
               

               
Cow position:
               
chr17:24497402-24497229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 94
               

               
Conread position:
               
106-258
               

               
Cow position:
               
chr17:42675785-42675940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
110-545
               

               
Cow position:
               
chr17:24587874-24587420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
110-708
               

               
Cow position:
               
chr17:36330716-36331327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 155
               

               
Conread position:
               
112-636
               

               
Cow position:
               
chr17:13243805-13244313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 157
               

               
Conread position:
               
113-295
               

               
Cow position:
               
chr17:12963367-12963557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
113-314
               

               
Cow position:
               
chr17:12019311-12019514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 126
               

               
Conread position:
               
113-442
               

               
Cow position:
               
chr17:25513868-25514221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 226
               

               
Conread position:
               
113-481
               

               
Cow position:
               
chr17:32280918-32280532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
113-538
               

               
Cow position:
               
chr17:32471541-32471985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr17:32278654-32279108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 157
               

               
Conread position:
               
113-560
               

               
Cow position:
               
chr17:21243560-21244000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
113-608
               

               
Cow position:
               
chr17:26818223-26818717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
113-713
               

               
Cow position:
               
chr17:20032660-20033282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 248
               

               
Conread position:
               
113-718
               

               
Cow position:
               
chr17:18202009-18201402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 258
               

               
Conread position:
               
114-444
               

               
Cow position:
               
chr17:40250658-40250326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
114-468
               

               
Cow position:
               
chr17:24559540-24559168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
33, 253
               

               
Conread position:
               
114-478
               

               
Cow position:
               
chr17:30728755-30728387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
8, 236
               

               
Conread position:
               
114-518
               

               
Cow position:
               
chr17:10458687-10459107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 57
               

               
Conread position:
               
114-643
               

               
Cow position:
               
chr17:5224626-5224103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
115-432
               

               
Cow position:
               
chr17:25342494-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
32, 224
               

               
Conread position:
               
115-447
               

               
Cow position:
               
chr17:21325551-21325230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
115-712
               

               
Cow position:
               
chr17:5898278-5898895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 260
               

               
Conread position:
               
116-306
               

               
Cow position:
               
chr17:3182152-3182340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
116-389
               

               
Cow position:
               
chr17:33154912-33155200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 192
               

               
Conread position:
               
116-446
               

               
Cow position:
               
chr17:7802927-7803276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 289
               

               
Conread position:
               
116-667
               

               
Cow position:
               
chr17:27795900-27795324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 367
               

               
Conread position:
               
116-712
               

               
Cow position:
               
chr17:17222588-17221976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
117-277
               

               
Cow position:
               
chr17:33288247-33288411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
117-499
               

               
Cow position:
               
chr17:3467995-3467618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 214
               

               
Conread position:
               
117-509
               

               
Cow position:
               
chr17:1562547-1562936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
117-708
               

               
Cow position:
               
chr17:924094-923515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 29
               

               
Conread position:
               
117-717
               

               
Cow position:
               
chr17:21292794-21293424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 163
               

               
Conread position:
               
117-718
               

               
Cow position:
               
chr17:11618832-11618206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 184
               

               
Conread position:
               
118-393
               

               
Cow position:
               
chr17:25126587-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
29, 237
               

               
Conread position:
               
118-542
               

               
Cow position:
               
chr17:33275515-33275941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 171
               

               
Conread position:
               
118-647
               

               
Cow position:
               
chr17:40331983-40331465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
118-718
               

               
Cow position:
               
chr17:13940075-13940695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 233
               

               
Conread position:
               
119-423
               

               
Cow position:
               
chr17:9824909-9824590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 236
               

               
Conread position:
               
119-535
               

               
Cow position:
               
chr17:908981-908558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 208
               

               
Conread position:
               
119-542
               

               
Cow position:
               
chr17:20071861-20072270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
119-594
               

               
Cow position:
               
chr17:21003589-21004082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
119-711
               

               
Cow position:
               
chr17:29084409-29083837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
119-719
               

               
Cow position:
               
chr17:40772072-40771449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 173
               

               
Conread position:
               
120-320
               

               
Cow position:
               
chr17:12289015-12288820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 79
               

               
Conread position:
               
120-320
               

               
Cow position:
               
chr17:12342261-12342456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 100
               

               
Conread position:
               
120-327
               

               
Cow position:
               
chr17:42150629-42150409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
120-362
               

               
Cow position:
               
chr17:9932070-9932319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
120-366
               

               
Cow position:
               
chr17:21793632-21793874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
120-387
               

               
Cow position:
               
chr17:25800643-25800925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
120-407
               

               
Cow position:
               
chr17:34790824-34791129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 227
               

               
Conread position:
               
120-412
               

               
Cow position:
               
chr17:40639188-40638882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
69, 232
               

               
Conread position:
               
120-475
               

               
Cow position:
               
chr17:6318627-6318988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 203
               

               
Conread position:
               
120-526
               

               
Cow position:
               
chr17:8836710-8837128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr17:12325529-12325947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 220
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr17:24004614-24004193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 260
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr17:25128113-25128550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 225
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr17:33793393-33792981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
120-570
               

               
Cow position:
               
chr17:23246427-23245988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
24, 69
               

               
Conread position:
               
120-642
               

               
Cow position:
               
chr17:15664917-15664370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
120-643
               

               
Cow position:
               
chr17:24974184-24973650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 220
               

               
Conread position:
               
120-677
               

               
Cow position:
               
chr17:24883329-24883897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 213
               

               
Conread position:
               
120-683
               

               
Cow position:
               
chr17:35387779-35388353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 101
               

               
Conread position:
               
120-714
               

               
Cow position:
               
chr17:11215652-11216250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
120-714
               

               
Cow position:
               
chr17:30539058-30539620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 64
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr17:33288417-33289029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 269
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr17:33933507-33934121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 342
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr17:17035186-17034961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
121-341
               

               
Cow position:
               
chr17:12556790-12556576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
121-370
               

               
Cow position:
               
chr17:25473041-25473304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 261
               

               
Conread position:
               
121-371
               

               
Cow position:
               
chr17:40276976-40276703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
121-392
               

               
Cow position:
               
chr17:18934496-18934209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 159
               

               
Conread position:
               
121-392
               

               
Cow position:
               
chr17:21039796-21039516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 223
               

               
Conread position:
               
121-396
               

               
Cow position:
               
chr17:32332852-32333144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
121-406
               

               
Cow position:
               
chr17:39606662-39606367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
121-422
               

               
Cow position:
               
chr17:40406663-40406366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
121-463
               

               
Cow position:
               
chr17:27183702-27184059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
24, 46
               

               
Conread position:
               
121-465
               

               
Cow position:
               
chr17:38362773-38363105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
92, 68
               

               
Conread position:
               
121-501
               

               
Cow position:
               
chr17:4968324-4967957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
121-525
               

               
Cow position:
               
chr17:25612327-25611915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 250
               

               
Conread position:
               
121-548
               

               
Cow position:
               
chr17:12447162-12447599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
121-548
               

               
Cow position:
               
chr17:41289804-41290218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
121-567
               

               
Cow position:
               
chr17:6423994-6423535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 92
               

               
Conread position:
               
121-576
               

               
Cow position:
               
chr17:32418877-32419352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 231
               

               
Conread position:
               
121-657
               

               
Cow position:
               
chr17:14025696-14026229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
121-745
               

               
Cow position:
               
chr17:12289170-12289821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 301
               

               
Conread position:
               
121-749
               

               
Cow position:
               
chr17:4601322-4601948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 16
               

               
Conread position:
               
122-371
               

               
Cow position:
               
chr17:29995196-29995464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
122-405
               

               
Cow position:
               
chr17:1025595-1025881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
122-447
               

               
Cow position:
               
chr17:25616485-25616156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 160
               

               
Conread position:
               
122-499
               

               
Cow position:
               
chr17:12946120-12946516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
122-518
               

               
Cow position:
               
chr17:1634255-1634653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
122-636
               

               
Cow position:
               
chr17:19891841-19891325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 31
               

               
Conread position:
               
122-714
               

               
Cow position:
               
chr17:22775609-22775019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 242
               

               
Conread position:
               
125-459
               

               
Cow position:
               
chr17:23563576-23563904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
24, 66
               

               
Conread position:
               
125-532
               

               
Cow position:
               
chr17:3577763-3577353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
126-412
               

               
Cow position:
               
chr17:22051356-22051661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 221
               

               
Conread position:
               
126-418
               

               
Cow position:
               
chr17:12510750-12511049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
126-443
               

               
Cow position:
               
chr17:11912270-11912596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
21, 242
               

               
Conread position:
               
126-461
               

               
Cow position:
               
chr17:1040963-1040629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
126-462
               

               
Cow position:
               
chr17:31856907-31856545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
126-501
               

               
Cow position:
               
chr17:31037142-31037533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 357
               

               
Conread position:
               
126-506
               

               
Cow position:
               
chr17:28468359-28467977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
21, 158
               

               
Conread position:
               
126-604
               

               
Cow position:
               
chr17:21114720-21115206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 244
               

               
Conread position:
               
126-612
               

               
Cow position:
               
chr17:11296874-11296369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 137
               

               
Conread position:
               
126-663
               

               
Cow position:
               
chr17:18490768-18490216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 342
               

               
Conread position:
               
126-712
               

               
Cow position:
               
chr17:11101583-11102158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 104
               

               
Conread position:
               
126-712
               

               
Cow position:
               
chr17:29714979-29715555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
126-717
               

               
Cow position:
               
chr17:5768129-5767527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
126-718
               

               
Cow position:
               
chr17:32989708-32989118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
126-718
               

               
Cow position:
               
chr17:32993392-32993988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 25
               

               
Conread position:
               
127-371
               

               
Cow position:
               
chr17:8815421-8815164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
127-400
               

               
Cow position:
               
chr17:5372298-5372585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
127-471
               

               
Cow position:
               
chr17:4299708-4300045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 57
               

               
Conread position:
               
127-509
               

               
Cow position:
               
chr17:7143091-7142702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 226
               

               
Conread position:
               
127-718
               

               
Cow position:
               
chr17:5000367-5000952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
128-371
               

               
Cow position:
               
chr17:40412812-40412560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 196
               

               
Conread position:
               
128-647
               

               
Cow position:
               
chr17:40312932-40312428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 134
               

               
Conread position:
               
129-382
               

               
Cow position:
               
chr17:17044103-17044371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
129-440
               

               
Cow position:
               
chr17:36864855-36864535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
18, 233
               

               
Conread position:
               
129-694
               

               
Cow position:
               
chr17:43717108-43717660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
132-514
               

               
Cow position:
               
chr17:12306171-12306563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 241
               

               
Conread position:
               
132-639
               

               
Cow position:
               
chr17:28284807-28285315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
132-710
               

               
Cow position:
               
chr17:18860515-18861085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 7
               

               
Conread position:
               
132-711
               

               
Cow position:
               
chr17:30529318-30529897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 223
               

               
Conread position:
               
133-540
               

               
Cow position:
               
chr17:24773904-24773490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 229
               

               
Conread position:
               
134-537
               

               
Cow position:
               
chr17:12536247-12536658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 340
               

               
Conread position:
               
134-548
               

               
Cow position:
               
chr17:11156281-11156694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
134-567
               

               
Cow position:
               
chr17:5422851-5423295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 247
               

               
Conread position:
               
135-427
               

               
Cow position:
               
chr17:23883067-23883339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
136-366
               

               
Cow position:
               
chr17:45296631-45296394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
136-369
               

               
Cow position:
               
chr17:12959327-12959081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
144-718
               

               
Cow position:
               
chr17:21972937-21973506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
146-451
               

               
Cow position:
               
chr17:40852181-40851876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
8, 148
               

               
Conread position:
               
146-505
               

               
Cow position:
               
chr17:6329325-6328951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
146-613
               

               
Cow position:
               
chr17:18473376-18472917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 144
               

               
Conread position:
               
147-718
               

               
Cow position:
               
chr17:26231141-26230564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 17
               

               
Conread position:
               
153-436
               

               
Cow position:
               
chr17:21489445-21489716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
220, 12
               

               
Conread position:
               
153-581
               

               
Cow position:
               
chr17:11664397-11664826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
153-703
               

               
Cow position:
               
chr17:15102709-15103237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
153-707
               

               
Cow position:
               
chr17:25189470-25188919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
153-718
               

               
Cow position:
               
chr17:30665452-30664900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
153-720
               

               
Cow position:
               
chr17:20780710-20780142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
155-500
               

               
Cow position:
               
chr17:4786310-4786648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
175-548
               

               
Cow position:
               
chr17:21738712-21739085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
176-647
               

               
Cow position:
               
chr17:25901361-25900895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
176-676
               

               
Cow position:
               
chr17:24077562-24077073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 40
               

               
Conread position:
               
178-378
               

               
Cow position:
               
chr17:28814334-28814533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
178-433
               

               
Cow position:
               
chr17:21922475-21922711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
243, 38
               

               
Conread position:
               
178-443
               

               
Cow position:
               
chr17:34751247-34751504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
178-463
               

               
Cow position:
               
chr17:32349226-32348955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
178-545
               

               
Cow position:
               
chr17:2662583-2662211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
186, 38
               

               
Conread position:
               
179-538
               

               
Cow position:
               
chr17:11831957-11832330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 38
               

               
Conread position:
               
180-357
               

               
Cow position:
               
chr17:37340873-37341053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 37
               

               
Conread position:
               
180-364
               

               
Cow position:
               
chr17:24163193-24163018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
158, 38
               

               
Conread position:
               
180-388
               

               
Cow position:
               
chr17:35051771-35051563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
180-421
               

               
Cow position:
               
chr17:22056871-22057099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
180-444
               

               
Cow position:
               
chr17:35573909-35573663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
180-461
               

               
Cow position:
               
chr17:17410450-17410172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
167, 36
               

               
Conread position:
               
180-464
               

               
Cow position:
               
chr17:7137144-7136862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
51, 24
               

               
Conread position:
               
180-518
               

               
Cow position:
               
chr17:20990033-20990365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
180-518
               

               
Cow position:
               
chr17:32273530-32273855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 37
               

               
Conread position:
               
180-538
               

               
Cow position:
               
chr17:9746669-9746327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 37
               

               
Conread position:
               
180-544
               

               
Cow position:
               
chr17:9911914-9911566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr17:11280943-11281308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
108, 37
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr17:12219782-12220139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr17:17406292-17405937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
180-622
               

               
Cow position:
               
chr17:8079469-8079038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 36
               

               
Conread position:
               
180-660
               

               
Cow position:
               
chr17:1060888-1061375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 35
               

               
Conread position:
               
180-690
               

               
Cow position:
               
chr17:9854132-9853639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 11
               

               
Conread position:
               
180-691
               

               
Cow position:
               
chr17:43141552-43142065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
180-694
               

               
Cow position:
               
chr17:5900526-5900034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 38
               

               
Conread position:
               
180-712
               

               
Cow position:
               
chr17:20848679-20848167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 36
               

               
Conread position:
               
180-712
               

               
Cow position:
               
chr17:32366450-32365917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 59
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr17:1492992-1493531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 36
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr17:29157573-29157057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 35
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr17:38833200-38832679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
180-760
               

               
Cow position:
               
chr17:21495528-21494963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 36
               

               
Conread position:
               
181-320
               

               
Cow position:
               
chr17:37129365-37129224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
181-430
               

               
Cow position:
               
chr17:21757985-21758224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
192, 35
               

               
Conread position:
               
181-542
               

               
Cow position:
               
chr17:1035441-1035796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
191, 35
               

               
Conread position:
               
181-690
               

               
Cow position:
               
chr17:8690296-8690799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
182-415
               

               
Cow position:
               
chr17:3153420-3153642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
182-545
               

               
Cow position:
               
chr17:25032327-25032670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 34
               

               
Conread position:
               
182-706
               

               
Cow position:
               
chr17:32027297-32027825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
182-719
               

               
Cow position:
               
chr17:14003980-14003454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
183-421
               

               
Cow position:
               
chr17:2275624-2275398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
172, 33
               

               
Conread position:
               
183-425
               

               
Cow position:
               
chr17:36275487-36275259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
190, 33
               

               
Conread position:
               
183-443
               

               
Cow position:
               
chr17:15340598-15340851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
183-463
               

               
Cow position:
               
chr17:6848948-6848686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
190, 33
               

               
Conread position:
               
183-509
               

               
Cow position:
               
chr17:27058403-27058715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
143, 33
               

               
Conread position:
               
183-511
               

               
Cow position:
               
chr17:4105840-4106150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 33
               

               
Conread position:
               
183-511
               

               
Cow position:
               
chr17:4121576-4121886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 33
               

               
Conread position:
               
183-524
               

               
Cow position:
               
chr17:12591328-12590986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
183-545
               

               
Cow position:
               
chr17:15684664-15684307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
183-548
               

               
Cow position:
               
chr17:7810601-7810940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 34
               

               
Conread position:
               
183-652
               

               
Cow position:
               
chr17:30718264-30718725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 34
               

               
Conread position:
               
183-712
               

               
Cow position:
               
chr17:26765189-26764644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 185
               

               
Conread position:
               
184-433
               

               
Cow position:
               
chr17:27202895-27203133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
189, 8
               

               
Conread position:
               
184-468
               

               
Cow position:
               
chr17:20874549-20874264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
184-619
               

               
Cow position:
               
chr17:41891909-41892331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
129, 19
               

               
Conread position:
               
184-709
               

               
Cow position:
               
chr17:21335539-21336063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 18
               

               
Conread position:
               
184-715
               

               
Cow position:
               
chr17:32138271-32138769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 32
               

               
Conread position:
               
185-400
               

               
Cow position:
               
chr17:16158643-16158435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
144, 31
               

               
Conread position:
               
185-426
               

               
Cow position:
               
chr17:38263338-38263568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
156, 32
               

               
Conread position:
               
185-712
               

               
Cow position:
               
chr17:20992890-20993411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 31
               

               
Conread position:
               
191-433
               

               
Cow position:
               
chr17:23516785-23517031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
191-461
               

               
Cow position:
               
chr17:39857543-39857276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
131, 12
               

               
Conread position:
               
191-710
               

               
Cow position:
               
chr17:3683515-3684024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 93
               

               
Conread position:
               
192-323
               

               
Cow position:
               
chr17:11478924-11478791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
193-410
               

               
Cow position:
               
chr17:24751067-24750851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
194-400
               

               
Cow position:
               
chr17:22246138-22245936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
179, 23
               

               
Conread position:
               
205-589
               

               
Cow position:
               
chr17:552828-553210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
21, 110
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr17:33657932-33658185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 140
               

               
Conread position:
               
211-390
               

               
Cow position:
               
chr17:37816059-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 111
               

               
Conread position:
               
211-459
               

               
Cow position:
               
chr17:25502246-25501995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
211-548
               

               
Cow position:
               
chr17:11172480-11172816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
211-609
               

               
Cow position:
               
chr17:3503717-3503312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
213-567
               

               
Cow position:
               
chr17:7698179-7697832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 39
               

               
Conread position:
               
221-719
               

               
Cow position:
               
chr17:16446311-16446807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
223-365
               

               
Cow position:
               
chr17:7851209-7851067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
99, 121
               

               
Conread position:
               
223-548
               

               
Cow position:
               
chr17:33052973-33052662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
150, 73
               

               
Conread position:
               
223-590
               

               
Cow position:
               
chr17:18495398-18495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
223-613
               

               
Cow position:
               
chr17:20126719-20126351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 38
               

               
Conread position:
               
223-619
               

               
Cow position:
               
chr17:8544428-8544032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
223-693
               

               
Cow position:
               
chr17:40288878-40289350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 113
               

               
Conread position:
               
223-715
               

               
Cow position:
               
chr17:32651737-32651244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
223-719
               

               
Cow position:
               
chr17:1410116-1410620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 468
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr17:22048667-22048844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
98, 146
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr17:20884644-20884406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
224-465
               

               
Cow position:
               
chr17:32017771-32018002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 55
               

               
Conread position:
               
224-474
               

               
Cow position:
               
chr17:36500924-36500675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
224-518
               

               
Cow position:
               
chr17:24821982-24821695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
224-549
               

               
Cow position:
               
chr17:25097576-25097261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
224-658
               

               
Cow position:
               
chr17:34078990-34079413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 98
               

               
Conread position:
               
224-712
               

               
Cow position:
               
chr17:6566602-6566110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 173
               

               
Conread position:
               
224-718
               

               
Cow position:
               
chr17:979046-979509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 52
               

               
Conread position:
               
224-718
               

               
Cow position:
               
chr17:24554117-24553630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 101
               

               
Conread position:
               
226-426
               

               
Cow position:
               
chr17:11368731-11368932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
226-429
               

               
Cow position:
               
chr17:5850229-5850431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
49, 99
               

               
Conread position:
               
226-552
               

               
Cow position:
               
chr17:38647180-38646859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 149
               

               
Conread position:
               
226-628
               

               
Cow position:
               
chr17:22032576-22032968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 99
               

               
Conread position:
               
226-661
               

               
Cow position:
               
chr17:40421790-40421351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 151
               

               
Conread position:
               
226-706
               

               
Cow position:
               
chr17:18592561-18592074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 159
               

               
Conread position:
               
226-718
               

               
Cow position:
               
chr17:39736293-39735806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
227-526
               

               
Cow position:
               
chr17:265789-265477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
110, 63
               

               
Conread position:
               
227-542
               

               
Cow position:
               
chr17:26000235-25999921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
227-589
               

               
Cow position:
               
chr17:16371374-16371004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 238
               

               
Conread position:
               
230-317
               

               
Cow position:
               
chr17:13236225-13236312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
230-367
               

               
Cow position:
               
chr17:18848043-18848183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
230-412
               

               
Cow position:
               
chr17:27730658-27730472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
230-417
               

               
Cow position:
               
chr17:21478807-21478995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
230-440
               

               
Cow position:
               
chr17:21744046-21743842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 44
               

               
Conread position:
               
230-481
               

               
Cow position:
               
chr17:26233715-26233963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
141, 106
               

               
Conread position:
               
230-489
               

               
Cow position:
               
chr17:24928590-24928338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 101
               

               
Conread position:
               
230-512
               

               
Cow position:
               
chr17:34650575-34650278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
230-538
               

               
Cow position:
               
chr17:37479887-37480184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 51
               

               
Conread position:
               
230-548
               

               
Cow position:
               
chr17:1275638-1275318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
230-564
               

               
Cow position:
               
chr17:1256385-1256721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 158
               

               
Conread position:
               
230-611
               

               
Cow position:
               
chr17:18108972-18109354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
230-643
               

               
Cow position:
               
chr17:38615075-38614660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
230-676
               

               
Cow position:
               
chr17:12929416-12929876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
230-705
               

               
Cow position:
               
chr17:14033527-14034009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr17:6156146-6155659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 86
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr17:24824357-24823890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 106
               

               
Conread position:
               
230-719
               

               
Cow position:
               
chr17:17060567-17061046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 107
               

               
Conread position:
               
231-445
               

               
Cow position:
               
chr17:14652666-14652881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
231-458
               

               
Cow position:
               
chr17:23798395-23798168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 206
               

               
Conread position:
               
231-464
               

               
Cow position:
               
chr17:25594577-25594823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 221
               

               
Conread position:
               
231-496
               

               
Cow position:
               
chr17:25117998-25117742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 100
               

               
Conread position:
               
231-515
               

               
Cow position:
               
chr17:21917759-21918042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
231-518
               

               
Cow position:
               
chr17:24149298-24149006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
231-545
               

               
Cow position:
               
chr17:21599569-21599880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
231-611
               

               
Cow position:
               
chr17:25796223-25796608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 98
               

               
Conread position:
               
231-712
               

               
Cow position:
               
chr17:34596054-34595569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
231-718
               

               
Cow position:
               
chr17:10528614-10529119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
231-718
               

               
Cow position:
               
chr17:28540142-28539665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
232-548
               

               
Cow position:
               
chr17:4225387-4225692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 34
               

               
Conread position:
               
233-708
               

               
Cow position:
               
chr17:25541705-25542177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 155
               

               
Conread position:
               
234-407
               

               
Cow position:
               
chr17:39715271-39715095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
237-369
               

               
Cow position:
               
chr17:35140989-35141122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
237-712
               

               
Cow position:
               
chr17:14248902-14249403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
238-491
               

               
Cow position:
               
chr17:1113995-1113738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
134, 84
               

               
Conread position:
               
238-579
               

               
Cow position:
               
chr17:25335286-25335620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 208
               

               
Conread position:
               
238-613
               

               
Cow position:
               
chr17:17951338-17950973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
118, 73
               

               
Conread position:
               
238-647
               

               
Cow position:
               
chr17:17121778-17121372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
243-548
               

               
Cow position:
               
chr17:1020459-1020768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
129, 248
               

               
Conread position:
               
244-392
               

               
Cow position:
               
chr17:22016983-22017135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
244-568
               

               
Cow position:
               
chr17:35126811-35126489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 220
               

               
Conread position:
               
252-710
               

               
Cow position:
               
chr17:2034622-2034178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
76, 92
               

               
Conread position:
               
253-570
               

               
Cow position:
               
chr17:20870006-20870320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
259-712
               

               
Cow position:
               
chr17:12059007-12059461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 27
               

               
Conread position:
               
259-718
               

               
Cow position:
               
chr17:15333624-15334096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 188
               

               
Conread position:
               
267-446
               

               
Cow position:
               
chr17:32009362-32009539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
267-545
               

               
Cow position:
               
chr17:6624334-6624060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
273-549
               

               
Cow position:
               
chr17:9778315-9778049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
274-513
               

               
Cow position:
               
chr17:10510586-10510828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 191
               

               
Conread position:
               
281-498
               

               
Cow position:
               
chr17:42259246-42259050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
281-608
               

               
Cow position:
               
chr17:42347160-42347486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
283-537
               

               
Cow position:
               
chr17:33926063-33926316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
284-463
               

               
Cow position:
               
chr17:267522-267707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 80
               

               
Conread position:
               
284-542
               

               
Cow position:
               
chr17:21207080-21207330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 45
               

               
Conread position:
               
284-712
               

               
Cow position:
               
chr17:13143627-13144051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 182
               

               
Conread position:
               
290-718
               

               
Cow position:
               
chr17:27306215-27305790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
291-660
               

               
Cow position:
               
chr17:242692-242322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 175
               

               
Conread position:
               
298-568
               

               
Cow position:
               
chr17:21312762-21313026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
308-538
               

               
Cow position:
               
chr17:4436194-4436422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
316-641
               

               
Cow position:
               
chr17:12216046-12216369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
317-696
               

               
Cow position:
               
chr17:44561051-44561426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
325-693
               

               
Cow position:
               
chr17:39412478-39412847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 96
               

               
Conread position:
               
332-696
               

               
Cow position:
               
chr17:41393699-41394062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
339-458
               

               
Cow position:
               
chr17:12768774-12768894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
346-656
               

               
Cow position:
               
chr17:4606956-4606659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
352-548
               

               
Cow position:
               
chr17:30999760-30999575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
116, 22
               

               
Conread position:
               
353-549
               

               
Cow position:
               
chr17:20835589-20835391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
361-718
               

               
Cow position:
               
chr17:3498679-3499045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
362-549
               

               
Cow position:
               
chr17:3182601-3182786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
362-701
               

               
Cow position:
               
chr17:3518269-3518597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
366-548
               

               
Cow position:
               
chr17:1358822-1358998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
136, 79
               

               
Conread position:
               
372-526
               

               
Cow position:
               
chr17:3442696-3442847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
128, 91
               

               
Conread position:
               
380-747
               

               
Cow position:
               
chr17:21039243-21038879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 137
               

               
Conread position:
               
384-567
               

               
Cow position:
               
chr17:36533617-36533437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 78
               
Show alignments to all cow chromosomes.