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Cow genome map

           
Conread name:
           
Thy1-THY010079D05
        

               
Conread position:
               
100-447
               

               
Cow position:
               
chr18:56190800-56191148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
104-548
               

               
Cow position:
               
chr18:38985874-38985413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
105-362
               

               
Cow position:
               
chr18:42953895-42954157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 46
               

               
Conread position:
               
110-299
               

               
Cow position:
               
chr18:35581876-35582066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 74
               

               
Conread position:
               
110-663
               

               
Cow position:
               
chr18:14586302-14586869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 219
               

               
Conread position:
               
110-663
               

               
Cow position:
               
chr18:39662960-39662384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 249
               

               
Conread position:
               
110-712
               

               
Cow position:
               
chr18:30359964-30360565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 223
               

               
Conread position:
               
111-718
               

               
Cow position:
               
chr18:43283580-43284199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 305
               

               
Conread position:
               
113-304
               

               
Cow position:
               
chr18:41703008-41702804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 168
               

               
Conread position:
               
113-327
               

               
Cow position:
               
chr18:49981284-49981495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
113-367
               

               
Cow position:
               
chr18:49015288-49015030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
113-368
               

               
Cow position:
               
chr18:22568893-22569164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 56
               

               
Conread position:
               
113-416
               

               
Cow position:
               
chr18:49038627-49038316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
113-434
               

               
Cow position:
               
chr18:25601151-25601481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 192
               

               
Conread position:
               
113-517
               

               
Cow position:
               
chr18:3017920-3018322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
113-575
               

               
Cow position:
               
chr18:1144018-1144499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
113-718
               

               
Cow position:
               
chr18:19646331-19645727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 98
               

               
Conread position:
               
114-367
               

               
Cow position:
               
chr18:32189344-32189607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 32
               

               
Conread position:
               
114-421
               

               
Cow position:
               
chr18:51594640-51594952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
9, 81
               

               
Conread position:
               
115-613
               

               
Cow position:
               
chr18:56181286-56181798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 298
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr18:15809640-15809865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 151
               

               
Conread position:
               
116-341
               

               
Cow position:
               
chr18:50359496-50359262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
116-347
               

               
Cow position:
               
chr18:6470263-6470026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 213
               

               
Conread position:
               
116-369
               

               
Cow position:
               
chr18:35367035-35367284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
116-451
               

               
Cow position:
               
chr18:28930470-28930810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
116-510
               

               
Cow position:
               
chr18:4495719-4496124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 50
               

               
Conread position:
               
116-541
               

               
Cow position:
               
chr18:29796276-29796692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 105
               

               
Conread position:
               
116-715
               

               
Cow position:
               
chr18:47183142-47183730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
117-276
               

               
Cow position:
               
chr18:9596347-9596178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr18:6258956-6258766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
117-369
               

               
Cow position:
               
chr18:35534981-35535248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
117-428
               

               
Cow position:
               
chr18:20462537-20462851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
117-696
               

               
Cow position:
               
chr18:6881186-6881755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 168
               

               
Conread position:
               
117-718
               

               
Cow position:
               
chr18:17005408-17004806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
117-718
               

               
Cow position:
               
chr18:22789920-22790515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 198
               

               
Conread position:
               
117-718
               

               
Cow position:
               
chr18:28657748-28658356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
118-298
               

               
Cow position:
               
chr18:11857065-11856874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
118-312
               

               
Cow position:
               
chr18:14225557-14225353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
118-347
               

               
Cow position:
               
chr18:24719479-24719236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
118-411
               

               
Cow position:
               
chr18:2146423-2146727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
118-421
               

               
Cow position:
               
chr18:5632434-5632115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chr18:1571069-1571388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
9, 180
               

               
Conread position:
               
118-422
               

               
Cow position:
               
chr18:51643200-51643517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 263
               

               
Conread position:
               
118-513
               

               
Cow position:
               
chr18:18592633-18592233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 218
               

               
Conread position:
               
118-712
               

               
Cow position:
               
chr18:19849602-19850187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
119-333
               

               
Cow position:
               
chr18:45558311-45558085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
119-434
               

               
Cow position:
               
chr18:19641142-19640816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 221
               

               
Conread position:
               
119-545
               

               
Cow position:
               
chr18:47525560-47525135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
119-547
               

               
Cow position:
               
chr18:50382418-50381984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
119-588
               

               
Cow position:
               
chr18:3132605-3133060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
119-591
               

               
Cow position:
               
chr18:4884351-4884836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 164
               

               
Conread position:
               
119-690
               

               
Cow position:
               
chr18:3209887-3209303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 310
               

               
Conread position:
               
119-712
               

               
Cow position:
               
chr18:50637324-50637904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 102
               

               
Conread position:
               
120-311
               

               
Cow position:
               
chr18:2793809-2794011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
120-325
               

               
Cow position:
               
chr18:9846251-9846464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
120-327
               

               
Cow position:
               
chr18:44917921-44917701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
120-333
               

               
Cow position:
               
chr18:47693221-47693004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
120-335
               

               
Cow position:
               
chr18:38937987-38937758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 201
               

               
Conread position:
               
120-382
               

               
Cow position:
               
chr18:43796792-43797065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 228
               

               
Conread position:
               
120-388
               

               
Cow position:
               
chr18:12584677-12584961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
120-398
               

               
Cow position:
               
chr18:23630448-23630727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
120-441
               

               
Cow position:
               
chr18:8170924-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 319
               

               
Conread position:
               
120-462
               

               
Cow position:
               
chr18:8300174-8299822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
120-483
               

               
Cow position:
               
chr18:1399185-1399564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
120-484
               

               
Cow position:
               
chr18:30341015-30341389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
27, 177
               

               
Conread position:
               
120-496
               

               
Cow position:
               
chr18:23714722-23715110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 329
               

               
Conread position:
               
120-538
               

               
Cow position:
               
chr18:11691239-11691676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 153
               

               
Conread position:
               
120-544
               

               
Cow position:
               
chr18:12059161-12058747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 155
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr18:5711509-5711942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 61
               

               
Conread position:
               
120-711
               

               
Cow position:
               
chr18:47512162-47511558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
120-711
               

               
Cow position:
               
chr18:55120034-55119433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 287
               

               
Conread position:
               
120-717
               

               
Cow position:
               
chr18:55782267-55782873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:3180577-3179972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 224
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:7965399-7964783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 254
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:9974163-9974773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 231
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:12117686-12118292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:19193205-19193793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:20641334-20641926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:26939139-26938539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:50082114-50082680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 58
               

               
Conread position:
               
120-718
               

               
Cow position:
               
chr18:51405750-51406339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
615
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
121-320
               

               
Cow position:
               
chr18:50632279-50632491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
121-333
               

               
Cow position:
               
chr18:38806733-38806524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
121-340
               

               
Cow position:
               
chr18:18844177-18843944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 150
               

               
Conread position:
               
121-400
               

               
Cow position:
               
chr18:31711411-31711695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
25, 70
               

               
Conread position:
               
121-417
               

               
Cow position:
               
chr18:54130176-54130480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
121-433
               

               
Cow position:
               
chr18:4555998-4556331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
121-459
               

               
Cow position:
               
chr18:4601879-4602198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 62
               

               
Conread position:
               
121-461
               

               
Cow position:
               
chr18:48713708-48713359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
121-510
               

               
Cow position:
               
chr18:42479414-42479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 363
               

               
Conread position:
               
121-516
               

               
Cow position:
               
chr18:17390824-17391216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 156
               

               
Conread position:
               
121-534
               

               
Cow position:
               
chr18:12023473-12023893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 199
               

               
Conread position:
               
121-568
               

               
Cow position:
               
chr18:46048891-46048467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
121-608
               

               
Cow position:
               
chr18:49100219-49100707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
121-659
               

               
Cow position:
               
chr18:18339796-18340342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
121-696
               

               
Cow position:
               
chr18:9010871-9010307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 200
               

               
Conread position:
               
121-718
               

               
Cow position:
               
chr18:45903730-45904345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 161
               

               
Conread position:
               
122-642
               

               
Cow position:
               
chr18:10576268-10575740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 280
               

               
Conread position:
               
122-710
               

               
Cow position:
               
chr18:44262789-44262175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 87
               

               
Conread position:
               
122-712
               

               
Cow position:
               
chr18:33300050-33299467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
123-461
               

               
Cow position:
               
chr18:52877512-52877189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
125-548
               

               
Cow position:
               
chr18:13360192-13359788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 22
               

               
Conread position:
               
125-548
               

               
Cow position:
               
chr18:31586232-31586638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
126-317
               

               
Cow position:
               
chr18:26458210-26458395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
126-424
               

               
Cow position:
               
chr18:50095248-50095547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
126-440
               

               
Cow position:
               
chr18:48633908-48633623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
126-442
               

               
Cow position:
               
chr18:9066861-9066527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 258
               

               
Conread position:
               
126-478
               

               
Cow position:
               
chr18:42431931-42432300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 344
               

               
Conread position:
               
126-499
               

               
Cow position:
               
chr18:42431453-42431829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
20, 259
               

               
Conread position:
               
126-500
               

               
Cow position:
               
chr18:10977054-10977436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
126-544
               

               
Cow position:
               
chr18:33159104-33158693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 184
               

               
Conread position:
               
126-546
               

               
Cow position:
               
chr18:46452722-46453151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
126-609
               

               
Cow position:
               
chr18:9366083-9365576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 499
               

               
Conread position:
               
126-629
               

               
Cow position:
               
chr18:10322957-10322461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
126-718
               

               
Cow position:
               
chr18:11867499-11866901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 254
               

               
Conread position:
               
127-441
               

               
Cow position:
               
chr18:30586076-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
127-570
               

               
Cow position:
               
chr18:5578455-5578004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 90
               

               
Conread position:
               
127-651
               

               
Cow position:
               
chr18:20173977-20174511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
130-663
               

               
Cow position:
               
chr18:55505560-55505011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
132-426
               

               
Cow position:
               
chr18:12273809-12273502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
132-475
               

               
Cow position:
               
chr18:7417064-7416731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
133-410
               

               
Cow position:
               
chr18:25006352-25006628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
134-433
               

               
Cow position:
               
chr18:3371034-3370736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
136-296
               

               
Cow position:
               
chr18:43125228-43125061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
11, 106
               

               
Conread position:
               
136-561
               

               
Cow position:
               
chr18:15613713-15614135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
137-576
               

               
Cow position:
               
chr18:11685107-11684686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 45
               

               
Conread position:
               
144-712
               

               
Cow position:
               
chr18:29356492-29357079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
146-676
               

               
Cow position:
               
chr18:10656556-10656041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
146-718
               

               
Cow position:
               
chr18:28101769-28101178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 104
               

               
Conread position:
               
148-512
               

               
Cow position:
               
chr18:24855725-24856083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
149-466
               

               
Cow position:
               
chr18:27109180-27109491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
198, 15
               

               
Conread position:
               
150-647
               

               
Cow position:
               
chr18:55692928-55692445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
153-433
               

               
Cow position:
               
chr18:24266297-24266575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 12
               

               
Conread position:
               
153-484
               

               
Cow position:
               
chr18:3211986-3211659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
153-718
               

               
Cow position:
               
chr18:5189584-5190127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
153-718
               

               
Cow position:
               
chr18:12242384-12241823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 11
               

               
Conread position:
               
153-718
               

               
Cow position:
               
chr18:51757200-51756651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
157-475
               

               
Cow position:
               
chr18:48452193-48451848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
157-596
               

               
Cow position:
               
chr18:29958045-29958472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 189
               

               
Conread position:
               
157-718
               

               
Cow position:
               
chr18:3158491-3159047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
159-411
               

               
Cow position:
               
chr18:42751483-42751752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 89
               

               
Conread position:
               
167-690
               

               
Cow position:
               
chr18:51443332-51443848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
168-440
               

               
Cow position:
               
chr18:51850470-51850729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
175-541
               

               
Cow position:
               
chr18:6609763-6610124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
175-695
               

               
Cow position:
               
chr18:11377452-11376946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 41
               

               
Conread position:
               
178-376
               

               
Cow position:
               
chr18:34219830-34220027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
60, 49
               

               
Conread position:
               
178-411
               

               
Cow position:
               
chr18:49841361-49841138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
158, 10
               

               
Conread position:
               
178-548
               

               
Cow position:
               
chr18:25282469-25282829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 38
               

               
Conread position:
               
178-548
               

               
Cow position:
               
chr18:25647163-25647523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 36
               

               
Conread position:
               
178-567
               

               
Cow position:
               
chr18:22214574-22214189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
178-690
               

               
Cow position:
               
chr18:42747673-42747167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 37
               

               
Conread position:
               
179-423
               

               
Cow position:
               
chr18:22274739-22274988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
179-427
               

               
Cow position:
               
chr18:52855139-52854893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
179-443
               

               
Cow position:
               
chr18:50974209-50974468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
23, 27
               

               
Conread position:
               
179-613
               

               
Cow position:
               
chr18:56171930-56172363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
179-614
               

               
Cow position:
               
chr18:19620025-19619606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 20
               

               
Conread position:
               
179-712
               

               
Cow position:
               
chr18:3417243-3416732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
179-718
               

               
Cow position:
               
chr18:35012223-35012753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
179-721
               

               
Cow position:
               
chr18:51691378-51691919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 38
               

               
Conread position:
               
180-327
               

               
Cow position:
               
chr18:2773309-2773448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
180-327
               

               
Cow position:
               
chr18:2776812-2776951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
180-331
               

               
Cow position:
               
chr18:16379006-16378863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
180-335
               

               
Cow position:
               
chr18:47705318-47705171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
180-344
               

               
Cow position:
               
chr18:47547904-47548059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
180-355
               

               
Cow position:
               
chr18:52414050-52413879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
180-383
               

               
Cow position:
               
chr18:4534940-4535128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 37
               

               
Conread position:
               
180-407
               

               
Cow position:
               
chr18:4203847-4204057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
193, 36
               

               
Conread position:
               
180-411
               

               
Cow position:
               
chr18:48242275-48242049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 36
               

               
Conread position:
               
180-421
               

               
Cow position:
               
chr18:16997337-16997102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
165, 36
               

               
Conread position:
               
180-463
               

               
Cow position:
               
chr18:19896368-19896648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
142, 36
               

               
Conread position:
               
180-488
               

               
Cow position:
               
chr18:36746176-36746471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
189, 36
               

               
Conread position:
               
180-489
               

               
Cow position:
               
chr18:1954506-1954808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 36
               

               
Conread position:
               
180-500
               

               
Cow position:
               
chr18:51392560-51392871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
180-517
               

               
Cow position:
               
chr18:33008149-33007813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
180-519
               

               
Cow position:
               
chr18:47828901-47828584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
142, 35
               

               
Conread position:
               
180-530
               

               
Cow position:
               
chr18:22055788-22056110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
148, 36
               

               
Conread position:
               
180-535
               

               
Cow position:
               
chr18:56184018-56183676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 36
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr18:39875177-39875533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 36
               

               
Conread position:
               
180-595
               

               
Cow position:
               
chr18:19273013-19273424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 36
               

               
Conread position:
               
180-664
               

               
Cow position:
               
chr18:7359828-7359348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 38
               

               
Conread position:
               
180-690
               

               
Cow position:
               
chr18:36459014-36458514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 36
               

               
Conread position:
               
180-709
               

               
Cow position:
               
chr18:30794509-30794016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr18:11322679-11322141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
180-719
               

               
Cow position:
               
chr18:37023467-37024005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 36
               

               
Conread position:
               
181-487
               

               
Cow position:
               
chr18:45637334-45637608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
181-645
               

               
Cow position:
               
chr18:2849185-2849636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
181-660
               

               
Cow position:
               
chr18:23446979-23447468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 37
               

               
Conread position:
               
182-369
               

               
Cow position:
               
chr18:17660479-17660655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 34
               

               
Conread position:
               
182-496
               

               
Cow position:
               
chr18:39434905-39434602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
182-682
               

               
Cow position:
               
chr18:12270582-12270080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 36
               

               
Conread position:
               
183-501
               

               
Cow position:
               
chr18:33896338-33896649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
100, 33
               

               
Conread position:
               
183-513
               

               
Cow position:
               
chr18:247615-247923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
190, 33
               

               
Conread position:
               
184-472
               

               
Cow position:
               
chr18:5766492-5766213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
186-371
               

               
Cow position:
               
chr18:53038910-53038727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
158, 32
               

               
Conread position:
               
187-611
               

               
Cow position:
               
chr18:44801813-44802224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 29
               

               
Conread position:
               
188-484
               

               
Cow position:
               
chr18:36230640-36230931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
191-568
               

               
Cow position:
               
chr18:33157899-33157523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
191-712
               

               
Cow position:
               
chr18:11184024-11183497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
191-712
               

               
Cow position:
               
chr18:37002716-37002193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 154
               

               
Conread position:
               
192-718
               

               
Cow position:
               
chr18:38687163-38686654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
193-622
               

               
Cow position:
               
chr18:56166051-56165631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
196-647
               

               
Cow position:
               
chr18:15880772-15881231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 17
               

               
Conread position:
               
205-437
               

               
Cow position:
               
chr18:39022323-39022095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
205-718
               

               
Cow position:
               
chr18:40759275-40758764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
207-701
               

               
Cow position:
               
chr18:23766343-23766851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 305
               

               
Conread position:
               
208-477
               

               
Cow position:
               
chr18:18369296-18369569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
208-508
               

               
Cow position:
               
chr18:896092-895793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 22
               

               
Conread position:
               
214-543
               

               
Cow position:
               
chr18:7945703-7945365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
220-705
               

               
Cow position:
               
chr18:7951168-7950678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 145
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr18:39623852-39623594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 110
               

               
Conread position:
               
221-548
               

               
Cow position:
               
chr18:32773930-32773605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
221-712
               

               
Cow position:
               
chr18:4182136-4182642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 129
               

               
Conread position:
               
221-718
               

               
Cow position:
               
chr18:22120833-22121328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 109
               

               
Conread position:
               
222-509
               

               
Cow position:
               
chr18:25984522-25984808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
223-438
               

               
Cow position:
               
chr18:31125180-31125388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 53
               

               
Conread position:
               
223-542
               

               
Cow position:
               
chr18:46727637-46727328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 150
               

               
Conread position:
               
223-549
               

               
Cow position:
               
chr18:47517156-47517483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
223-565
               

               
Cow position:
               
chr18:23476639-23476965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
278, 144
               

               
Conread position:
               
224-389
               

               
Cow position:
               
chr18:52406739-52406583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
224-450
               

               
Cow position:
               
chr18:43555477-43555704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
224-454
               

               
Cow position:
               
chr18:21102729-21102957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
224-498
               

               
Cow position:
               
chr18:2863943-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 249
               

               
Conread position:
               
224-548
               

               
Cow position:
               
chr18:51655995-51656327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
224-583
               

               
Cow position:
               
chr18:15025719-15025364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
224-595
               

               
Cow position:
               
chr18:55000695-55001061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
226-337
               

               
Cow position:
               
chr18:52649302-52649413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
226-422
               

               
Cow position:
               
chr18:46135786-46135591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
147, 137
               

               
Conread position:
               
226-459
               

               
Cow position:
               
chr18:16686290-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
226-548
               

               
Cow position:
               
chr18:28923802-28924106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 95
               

               
Conread position:
               
226-548
               

               
Cow position:
               
chr18:55788951-55789266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
276, 47
               

               
Conread position:
               
226-583
               

               
Cow position:
               
chr18:44483728-44484071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 115
               

               
Conread position:
               
226-718
               

               
Cow position:
               
chr18:4539837-4540320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 60
               

               
Conread position:
               
227-361
               

               
Cow position:
               
chr18:9176943-9176811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
227-718
               

               
Cow position:
               
chr18:14815304-14815789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 39
               

               
Conread position:
               
227-718
               

               
Cow position:
               
chr18:51212227-51211719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 25
               

               
Conread position:
               
230-378
               

               
Cow position:
               
chr18:7076996-7076849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
143, 106
               

               
Conread position:
               
230-426
               

               
Cow position:
               
chr18:19688065-19687864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
230-446
               

               
Cow position:
               
chr18:4331002-4330779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 136
               

               
Conread position:
               
230-449
               

               
Cow position:
               
chr18:36201588-36201804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
92, 62
               

               
Conread position:
               
230-457
               

               
Cow position:
               
chr18:51190558-51190777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
230-471
               

               
Cow position:
               
chr18:55806592-55806832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 91
               

               
Conread position:
               
230-474
               

               
Cow position:
               
chr18:3193746-3193501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
230-508
               

               
Cow position:
               
chr18:18961794-18962074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
104, 264
               

               
Conread position:
               
230-511
               

               
Cow position:
               
chr18:4629083-4628795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 240
               

               
Conread position:
               
230-548
               

               
Cow position:
               
chr18:42454981-42455294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
230-589
               

               
Cow position:
               
chr18:4381335-4380976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 237
               

               
Conread position:
               
230-643
               

               
Cow position:
               
chr18:5487283-5486878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
230-647
               

               
Cow position:
               
chr18:12775743-12776150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 117
               

               
Conread position:
               
230-693
               

               
Cow position:
               
chr18:34527054-34527530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
230-712
               

               
Cow position:
               
chr18:7952244-7951773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 57
               

               
Conread position:
               
230-712
               

               
Cow position:
               
chr18:45571054-45570586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr18:20865025-20864538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
231-407
               

               
Cow position:
               
chr18:23623593-23623769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr18:52703806-52704045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 175
               

               
Conread position:
               
231-543
               

               
Cow position:
               
chr18:20270974-20271289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
231-548
               

               
Cow position:
               
chr18:5995510-5995198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
231-548
               

               
Cow position:
               
chr18:25206148-25206466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
231-567
               

               
Cow position:
               
chr18:3115493-3115163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
231-595
               

               
Cow position:
               
chr18:52637489-52637859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
231-645
               

               
Cow position:
               
chr18:1585073-1585478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 213
               

               
Conread position:
               
231-715
               

               
Cow position:
               
chr18:11779693-11779221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 89
               

               
Conread position:
               
231-718
               

               
Cow position:
               
chr18:52635030-52635529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 248
               

               
Conread position:
               
231-718
               

               
Cow position:
               
chr18:55553007-55552517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 76
               

               
Conread position:
               
231-719
               

               
Cow position:
               
chr18:4927109-4926629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
231-719
               

               
Cow position:
               
chr18:55015408-55014942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
28, 43
               

               
Conread position:
               
233-693
               

               
Cow position:
               
chr18:30248101-30248551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
235-679
               

               
Cow position:
               
chr18:45961235-45961668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 81
               

               
Conread position:
               
236-690
               

               
Cow position:
               
chr18:55461671-55462128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 230
               

               
Conread position:
               
238-549
               

               
Cow position:
               
chr18:39115085-39115419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
57, 305
               

               
Conread position:
               
238-613
               

               
Cow position:
               
chr18:48513308-48513676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
238-672
               

               
Cow position:
               
chr18:51827314-51826888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
133, 84
               

               
Conread position:
               
238-712
               

               
Cow position:
               
chr18:28768399-28767925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 216
               

               
Conread position:
               
238-718
               

               
Cow position:
               
chr18:13172499-13172974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 81
               

               
Conread position:
               
245-596
               

               
Cow position:
               
chr18:43065556-43065186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
246-610
               

               
Cow position:
               
chr18:8104914-8105283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 226
               

               
Conread position:
               
247-519
               

               
Cow position:
               
chr18:12809879-12809614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
248-647
               

               
Cow position:
               
chr18:11832143-11831766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 68
               

               
Conread position:
               
248-652
               

               
Cow position:
               
chr18:33407640-33407240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 296
               

               
Conread position:
               
252-696
               

               
Cow position:
               
chr18:4796991-4796545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
252-719
               

               
Cow position:
               
chr18:14048728-14048273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
256-393
               

               
Cow position:
               
chr18:52402952-52403094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
256-432
               

               
Cow position:
               
chr18:29991495-29991680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
258-712
               

               
Cow position:
               
chr18:3184171-3183709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 107
               

               
Conread position:
               
266-518
               

               
Cow position:
               
chr18:20481877-20482118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
236, 56
               

               
Conread position:
               
266-689
               

               
Cow position:
               
chr18:38607234-38606817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 186
               

               
Conread position:
               
266-718
               

               
Cow position:
               
chr18:7487255-7486804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 58
               

               
Conread position:
               
267-463
               

               
Cow position:
               
chr18:19887577-19887766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
267-591
               

               
Cow position:
               
chr18:44548908-44549225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
268-711
               

               
Cow position:
               
chr18:55787930-55787490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
281-546
               

               
Cow position:
               
chr18:48453678-48453421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
281-718
               

               
Cow position:
               
chr18:33606621-33606183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 65
               

               
Conread position:
               
281-718
               

               
Cow position:
               
chr18:35636356-35636795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 174
               

               
Conread position:
               
281-718
               

               
Cow position:
               
chr18:42966854-42966390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
284-459
               

               
Cow position:
               
chr18:15340457-15340636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
284-718
               

               
Cow position:
               
chr18:6290770-6290331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
291-548
               

               
Cow position:
               
chr18:35827432-35827689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
297-718
               

               
Cow position:
               
chr18:35076367-35075943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 175
               

               
Conread position:
               
298-548
               

               
Cow position:
               
chr18:11680697-11680446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 42
               

               
Conread position:
               
298-566
               

               
Cow position:
               
chr18:48290466-48290734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 76
               

               
Conread position:
               
298-647
               

               
Cow position:
               
chr18:55397283-55396940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
301-718
               

               
Cow position:
               
chr18:43564196-43563775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
318-536
               

               
Cow position:
               
chr18:52864359-52864578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
324-513
               

               
Cow position:
               
chr18:28823023-28823208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 6
               

               
Conread position:
               
338-745
               

               
Cow position:
               
chr18:29388153-29387762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
339-710
               

               
Cow position:
               
chr18:13293444-13293069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
340-492
               

               
Cow position:
               
chr18:54056491-54056341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
350-685
               

               
Cow position:
               
chr18:4624509-4624845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
351-596
               

               
Cow position:
               
chr18:11233354-11233105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
360-636
               

               
Cow position:
               
chr18:48407703-48407424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 14
               

               
Conread position:
               
372-721
               

               
Cow position:
               
chr18:21721378-21721731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 95
               

               
Conread position:
               
373-647
               

               
Cow position:
               
chr18:54646377-54646114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
128, 43
               

               
Conread position:
               
376-518
               

               
Cow position:
               
chr18:2354795-2354650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
378-568
               

               
Cow position:
               
chr18:3422614-3422422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
385-545
               

               
Cow position:
               
chr18:56163473-56163316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
116, 75
               
Show alignments to all cow chromosomes.