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Cow genome map

           
Conread name:
           
Thy1-THY010079D05
        

               
Conread position:
               
95-371
               

               
Cow position:
               
chr27:6981676-6981943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
97-548
               

               
Cow position:
               
chr27:18031337-18030861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
47, 166
               

               
Conread position:
               
100-580
               

               
Cow position:
               
chr27:26643435-26643907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
101-586
               

               
Cow position:
               
chr27:29494161-29493677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
104-588
               

               
Cow position:
               
chr27:10979600-10980106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
106-309
               

               
Cow position:
               
chr27:20770774-20770567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
106-702
               

               
Cow position:
               
chr27:299632-299028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 177
               

               
Conread position:
               
112-518
               

               
Cow position:
               
chr27:6159741-6160150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
113-363
               

               
Cow position:
               
chr27:19508761-19509030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
113-364
               

               
Cow position:
               
chr27:26617164-26617416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 173
               

               
Conread position:
               
113-439
               

               
Cow position:
               
chr27:18646400-18646053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 269
               

               
Conread position:
               
113-446
               

               
Cow position:
               
chr27:4858870-4858547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
113-463
               

               
Cow position:
               
chr27:7615320-7614972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
113-509
               

               
Cow position:
               
chr27:11480889-11480470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 286
               

               
Conread position:
               
113-548
               

               
Cow position:
               
chr27:20553509-20553915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
113-603
               

               
Cow position:
               
chr27:26509407-26508904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 144
               

               
Conread position:
               
113-613
               

               
Cow position:
               
chr27:28932053-28931523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 497
               

               
Conread position:
               
114-304
               

               
Cow position:
               
chr27:13204214-13204415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
114-481
               

               
Cow position:
               
chr27:16103560-16103934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
114-588
               

               
Cow position:
               
chr27:22220298-22220796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 325
               

               
Conread position:
               
114-718
               

               
Cow position:
               
chr27:1637176-1636578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 287
               

               
Conread position:
               
115-298
               

               
Cow position:
               
chr27:2949565-2949377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 141
               

               
Conread position:
               
115-541
               

               
Cow position:
               
chr27:27554928-27554495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
115-548
               

               
Cow position:
               
chr27:30764783-30765230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
16, 359
               

               
Conread position:
               
115-568
               

               
Cow position:
               
chr27:28002052-28001601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 336
               

               
Conread position:
               
115-613
               

               
Cow position:
               
chr27:31373221-31372713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 124
               

               
Conread position:
               
115-718
               

               
Cow position:
               
chr27:31231329-31230723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
116-327
               

               
Cow position:
               
chr27:27055048-27055265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 158
               

               
Conread position:
               
116-471
               

               
Cow position:
               
chr27:20749250-20748886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 168
               

               
Conread position:
               
116-646
               

               
Cow position:
               
chr27:18543740-18544298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 359
               

               
Conread position:
               
117-548
               

               
Cow position:
               
chr27:16478569-16478150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
118-387
               

               
Cow position:
               
chr27:4720336-4720072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
118-567
               

               
Cow position:
               
chr27:4390503-4390033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 226
               

               
Conread position:
               
118-586
               

               
Cow position:
               
chr27:6541388-6541865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 240
               

               
Conread position:
               
118-718
               

               
Cow position:
               
chr27:15867146-15867759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 180
               

               
Conread position:
               
119-495
               

               
Cow position:
               
chr27:426725-427117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
119-548
               

               
Cow position:
               
chr27:29039166-29038742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
119-690
               

               
Cow position:
               
chr27:8062597-8062023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 216
               

               
Conread position:
               
119-718
               

               
Cow position:
               
chr27:14670625-14670009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 224
               

               
Conread position:
               
120-311
               

               
Cow position:
               
chr27:20888491-20888683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
120-349
               

               
Cow position:
               
chr27:31556850-31557078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
69, 111
               

               
Conread position:
               
120-382
               

               
Cow position:
               
chr27:23560273-23559995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
120-385
               

               
Cow position:
               
chr27:14303512-14303772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
120-396
               

               
Cow position:
               
chr27:2847629-2847901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
120-407
               

               
Cow position:
               
chr27:20812680-20812965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
120-416
               

               
Cow position:
               
chr27:22225813-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
27, 70
               

               
Conread position:
               
120-512
               

               
Cow position:
               
chr27:30872301-30871897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 189
               

               
Conread position:
               
120-516
               

               
Cow position:
               
chr27:26425979-26426375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 154
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr27:15669018-15668569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 260
               

               
Conread position:
               
120-548
               

               
Cow position:
               
chr27:20354356-20354778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
120-596
               

               
Cow position:
               
chr27:23929734-23930214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 71
               

               
Conread position:
               
120-609
               

               
Cow position:
               
chr27:7412149-7412646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 216
               

               
Conread position:
               
120-613
               

               
Cow position:
               
chr27:21669351-21668858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
120-643
               

               
Cow position:
               
chr27:28206560-28207095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 172
               

               
Conread position:
               
120-648
               

               
Cow position:
               
chr27:20283400-20283925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 76
               

               
Conread position:
               
120-690
               

               
Cow position:
               
chr27:8962485-8961926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
120-712
               

               
Cow position:
               
chr27:26434057-26433448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 233
               

               
Conread position:
               
121-294
               

               
Cow position:
               
chr27:24358097-24358279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
121-305
               

               
Cow position:
               
chr27:19741634-19741451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
121-339
               

               
Cow position:
               
chr27:6319679-6319910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
121-416
               

               
Cow position:
               
chr27:25721163-25720872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
121-442
               

               
Cow position:
               
chr27:20093056-20092743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
121-450
               

               
Cow position:
               
chr27:23594076-23594419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
121-513
               

               
Cow position:
               
chr27:4944749-4944365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
121-588
               

               
Cow position:
               
chr27:27389270-27388786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 304
               

               
Conread position:
               
121-588
               

               
Cow position:
               
chr27:30890058-30890528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
121-694
               

               
Cow position:
               
chr27:26999666-26999077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 291
               

               
Conread position:
               
121-711
               

               
Cow position:
               
chr27:27856096-27856707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 216
               

               
Conread position:
               
121-712
               

               
Cow position:
               
chr27:8353252-8353830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 71
               

               
Conread position:
               
121-712
               

               
Cow position:
               
chr27:15453970-15454577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 159
               

               
Conread position:
               
121-714
               

               
Cow position:
               
chr27:22035614-22035011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
121-715
               

               
Cow position:
               
chr27:22171059-22171667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
121-716
               

               
Cow position:
               
chr27:23452220-23452850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
121-718
               

               
Cow position:
               
chr27:17397694-17397082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 430
               

               
Conread position:
               
121-718
               

               
Cow position:
               
chr27:25783402-25783956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
122-386
               

               
Cow position:
               
chr27:17646396-17646128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
122-459
               

               
Cow position:
               
chr27:26226530-26226178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
25, 197
               

               
Conread position:
               
122-692
               

               
Cow position:
               
chr27:19387779-19388363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 169
               

               
Conread position:
               
123-387
               

               
Cow position:
               
chr27:12459047-12459321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
123-546
               

               
Cow position:
               
chr27:19660714-19661139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
126-437
               

               
Cow position:
               
chr27:15865372-15865696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
16, 288
               

               
Conread position:
               
126-443
               

               
Cow position:
               
chr27:23735731-23736058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
126-588
               

               
Cow position:
               
chr27:16284251-16284715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
126-610
               

               
Cow position:
               
chr27:2957179-2957668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 151
               

               
Conread position:
               
126-712
               

               
Cow position:
               
chr27:26807786-26807194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
126-718
               

               
Cow position:
               
chr27:10992136-10992739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 98
               

               
Conread position:
               
127-392
               

               
Cow position:
               
chr27:23484979-23485258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 150
               

               
Conread position:
               
127-511
               

               
Cow position:
               
chr27:29431239-29431622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
127-548
               

               
Cow position:
               
chr27:19544138-19543711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 87
               

               
Conread position:
               
127-694
               

               
Cow position:
               
chr27:13411605-13411012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 360
               

               
Conread position:
               
129-518
               

               
Cow position:
               
chr27:15409260-15408875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
129-542
               

               
Cow position:
               
chr27:16705018-16705439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
18, 207
               

               
Conread position:
               
131-607
               

               
Cow position:
               
chr27:23483017-23483486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
132-463
               

               
Cow position:
               
chr27:27442392-27442054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
13, 102
               

               
Conread position:
               
132-717
               

               
Cow position:
               
chr27:21393725-21393136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 52
               

               
Conread position:
               
133-646
               

               
Cow position:
               
chr27:26424807-26424289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
133-692
               

               
Cow position:
               
chr27:435001-435588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 201
               

               
Conread position:
               
138-537
               

               
Cow position:
               
chr27:22454979-22454593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 66
               

               
Conread position:
               
141-661
               

               
Cow position:
               
chr27:27039039-27038525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 78
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr27:5553284-5553515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
153-673
               

               
Cow position:
               
chr27:30868934-30868413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
154-548
               

               
Cow position:
               
chr27:30374764-30374372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
158-583
               

               
Cow position:
               
chr27:18593089-18593503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
164-410
               

               
Cow position:
               
chr27:31018001-31017771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
164-548
               

               
Cow position:
               
chr27:19685889-19685516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 50
               

               
Conread position:
               
166-538
               

               
Cow position:
               
chr27:20037295-20036940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 12
               

               
Conread position:
               
168-716
               

               
Cow position:
               
chr27:23472076-23472623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
177-642
               

               
Cow position:
               
chr27:26581600-26581147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
178-535
               

               
Cow position:
               
chr27:13251854-13252195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
178-613
               

               
Cow position:
               
chr27:20068136-20067720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 38
               

               
Conread position:
               
178-718
               

               
Cow position:
               
chr27:22418928-22418395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 38
               

               
Conread position:
               
179-394
               

               
Cow position:
               
chr27:23108063-23107854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
180-335
               

               
Cow position:
               
chr27:30489570-30489423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
180-360
               

               
Cow position:
               
chr27:28478420-28478594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
158, 36
               

               
Conread position:
               
180-379
               

               
Cow position:
               
chr27:22348330-22348521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
99, 36
               

               
Conread position:
               
180-421
               

               
Cow position:
               
chr27:15215067-15215307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
142, 28
               

               
Conread position:
               
180-429
               

               
Cow position:
               
chr27:15378632-15378396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
136, 9
               

               
Conread position:
               
180-442
               

               
Cow position:
               
chr27:8263498-8263239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
142, 22
               

               
Conread position:
               
180-456
               

               
Cow position:
               
chr27:29380695-29380967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
180-464
               

               
Cow position:
               
chr27:20901401-20901679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
42, 36
               

               
Conread position:
               
180-536
               

               
Cow position:
               
chr27:30988638-30988985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 38
               

               
Conread position:
               
180-538
               

               
Cow position:
               
chr27:12596617-12596947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr27:27641170-27640794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
180-548
               

               
Cow position:
               
chr27:30359247-30359593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
160, 36
               

               
Conread position:
               
180-638
               

               
Cow position:
               
chr27:4386221-4385772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
180-694
               

               
Cow position:
               
chr27:31219105-31219583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 36
               

               
Conread position:
               
180-695
               

               
Cow position:
               
chr27:22603026-22603512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
232, 37
               

               
Conread position:
               
180-696
               

               
Cow position:
               
chr27:19717755-19718269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 36
               

               
Conread position:
               
180-699
               

               
Cow position:
               
chr27:24227959-24227440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
180-711
               

               
Cow position:
               
chr27:1353423-1353960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 37
               

               
Conread position:
               
180-711
               

               
Cow position:
               
chr27:26959775-26959259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr27:1768783-1768262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 37
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr27:4672852-4673387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr27:21978298-21977765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 24
               

               
Conread position:
               
180-718
               

               
Cow position:
               
chr27:25809675-25809151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 36
               

               
Conread position:
               
181-421
               

               
Cow position:
               
chr27:16088646-16088883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
181-475
               

               
Cow position:
               
chr27:8168589-8168301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
148, 47
               

               
Conread position:
               
181-501
               

               
Cow position:
               
chr27:26490067-26489751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
181-593
               

               
Cow position:
               
chr27:28518137-28518532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 47
               

               
Conread position:
               
182-389
               

               
Cow position:
               
chr27:17918471-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
183-370
               

               
Cow position:
               
chr27:237114-237293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
154, 33
               

               
Conread position:
               
183-548
               

               
Cow position:
               
chr27:19648099-19647746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 33
               

               
Conread position:
               
183-658
               

               
Cow position:
               
chr27:24477260-24477712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
183-689
               

               
Cow position:
               
chr27:12246497-12246988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 34
               

               
Conread position:
               
183-718
               

               
Cow position:
               
chr27:28018169-28018707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 176
               

               
Conread position:
               
184-441
               

               
Cow position:
               
chr27:23510828-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
55, 7
               

               
Conread position:
               
184-545
               

               
Cow position:
               
chr27:25276987-25277331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
184-557
               

               
Cow position:
               
chr27:19546667-19546296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
185-461
               

               
Cow position:
               
chr27:28245648-28245915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
185-718
               

               
Cow position:
               
chr27:12278416-12277905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
191-335
               

               
Cow position:
               
chr27:788957-788809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
191-367
               

               
Cow position:
               
chr27:12710090-12710261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 13
               

               
Conread position:
               
191-383
               

               
Cow position:
               
chr27:20517503-20517695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
153, 23
               

               
Conread position:
               
191-492
               

               
Cow position:
               
chr27:17331342-17331644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 75
               

               
Conread position:
               
191-612
               

               
Cow position:
               
chr27:6550303-6550717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 90
               

               
Conread position:
               
191-701
               

               
Cow position:
               
chr27:23632451-23632950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 26
               

               
Conread position:
               
192-463
               

               
Cow position:
               
chr27:8405975-8405720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
181, 12
               

               
Conread position:
               
192-545
               

               
Cow position:
               
chr27:26238868-26239219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 140
               

               
Conread position:
               
192-699
               

               
Cow position:
               
chr27:7212868-7212368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 32
               

               
Conread position:
               
196-509
               

               
Cow position:
               
chr27:16780714-16781024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chr27:590904-590687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 167
               

               
Conread position:
               
208-458
               

               
Cow position:
               
chr27:31148619-31148871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
18, 106
               

               
Conread position:
               
211-712
               

               
Cow position:
               
chr27:20641472-20640977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 158
               

               
Conread position:
               
217-545
               

               
Cow position:
               
chr27:4835737-4835412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 156
               

               
Conread position:
               
221-718
               

               
Cow position:
               
chr27:11435449-11434959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 229
               

               
Conread position:
               
223-452
               

               
Cow position:
               
chr27:20497081-20497319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
223-571
               

               
Cow position:
               
chr27:24321065-24321413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 19
               

               
Conread position:
               
223-710
               

               
Cow position:
               
chr27:6073807-6074279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
224-407
               

               
Cow position:
               
chr27:21975929-21976109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
224-449
               

               
Cow position:
               
chr27:26135023-26135239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
92, 49
               

               
Conread position:
               
224-500
               

               
Cow position:
               
chr27:7731381-7731099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 250
               

               
Conread position:
               
224-712
               

               
Cow position:
               
chr27:26413378-26412908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 230
               

               
Conread position:
               
225-718
               

               
Cow position:
               
chr27:8942812-8942320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 205
               

               
Conread position:
               
226-500
               

               
Cow position:
               
chr27:23890816-23891087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
95, 114
               

               
Conread position:
               
226-516
               

               
Cow position:
               
chr27:28496492-28496208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
226-545
               

               
Cow position:
               
chr27:4813005-4812682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 317
               

               
Conread position:
               
226-597
               

               
Cow position:
               
chr27:27844124-27843741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 128
               

               
Conread position:
               
226-616
               

               
Cow position:
               
chr27:30407159-30406761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
226-659
               

               
Cow position:
               
chr27:27136642-27136222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 105
               

               
Conread position:
               
226-675
               

               
Cow position:
               
chr27:4806023-4805581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 53
               

               
Conread position:
               
226-718
               

               
Cow position:
               
chr27:1122910-1123394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 51
               

               
Conread position:
               
226-718
               

               
Cow position:
               
chr27:20549833-20549318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 158
               

               
Conread position:
               
227-510
               

               
Cow position:
               
chr27:27270663-27270377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
72, 86
               

               
Conread position:
               
227-544
               

               
Cow position:
               
chr27:1498195-1498508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
227-583
               

               
Cow position:
               
chr27:6499940-6500302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 116
               

               
Conread position:
               
227-609
               

               
Cow position:
               
chr27:24014860-24014478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 138
               

               
Conread position:
               
227-612
               

               
Cow position:
               
chr27:29399705-29400082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
227-682
               

               
Cow position:
               
chr27:4819833-4819375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
227-712
               

               
Cow position:
               
chr27:20628948-20629394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 88
               

               
Conread position:
               
227-718
               

               
Cow position:
               
chr27:29831818-29831328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 232
               

               
Conread position:
               
229-647
               

               
Cow position:
               
chr27:29798836-29799243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
230-382
               

               
Cow position:
               
chr27:21130188-21130344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
97, 129
               

               
Conread position:
               
230-412
               

               
Cow position:
               
chr27:26407277-26407100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
230-445
               

               
Cow position:
               
chr27:20078750-20078965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 35
               

               
Conread position:
               
230-461
               

               
Cow position:
               
chr27:16625782-16626010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
98, 35
               

               
Conread position:
               
230-478
               

               
Cow position:
               
chr27:30672676-30672430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
143, 92
               

               
Conread position:
               
230-488
               

               
Cow position:
               
chr27:20918773-20919030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 75
               

               
Conread position:
               
230-542
               

               
Cow position:
               
chr27:18739259-18739581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
90, 242
               

               
Conread position:
               
230-544
               

               
Cow position:
               
chr27:11296152-11296452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
230-548
               

               
Cow position:
               
chr27:10307415-10307097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
214, 36
               

               
Conread position:
               
230-600
               

               
Cow position:
               
chr27:30354462-30354094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
115, 92
               

               
Conread position:
               
230-603
               

               
Cow position:
               
chr27:18507532-18507889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
230-717
               

               
Cow position:
               
chr27:15871043-15871532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 110
               

               
Conread position:
               
230-718
               

               
Cow position:
               
chr27:22426950-22426457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 121
               

               
Conread position:
               
230-724
               

               
Cow position:
               
chr27:21408681-21408173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 412
               

               
Conread position:
               
231-464
               

               
Cow position:
               
chr27:22569667-22569889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
231-496
               

               
Cow position:
               
chr27:20247921-20247658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
231-499
               

               
Cow position:
               
chr27:715384-715652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
231-500
               

               
Cow position:
               
chr27:22513794-22513525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
231-533
               

               
Cow position:
               
chr27:6787839-6788142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
141, 108
               

               
Conread position:
               
231-644
               

               
Cow position:
               
chr27:29977134-29977553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 154
               

               
Conread position:
               
231-712
               

               
Cow position:
               
chr27:10582256-10582729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 118
               

               
Conread position:
               
234-458
               

               
Cow position:
               
chr27:11151555-11151787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
234-500
               

               
Cow position:
               
chr27:28271264-28270997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 40
               

               
Conread position:
               
235-529
               

               
Cow position:
               
chr27:3784-4067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
87, 62
               

               
Conread position:
               
235-596
               

               
Cow position:
               
chr27:15204342-15203981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
99, 121
               

               
Conread position:
               
236-690
               

               
Cow position:
               
chr27:9090902-9090457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 41
               

               
Conread position:
               
238-566
               

               
Cow position:
               
chr27:26218592-26218915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
238-701
               

               
Cow position:
               
chr27:26428242-26427773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 98
               

               
Conread position:
               
238-718
               

               
Cow position:
               
chr27:13410272-13409794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 83
               

               
Conread position:
               
239-455
               

               
Cow position:
               
chr27:13274267-13274046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
243-463
               

               
Cow position:
               
chr27:20789484-20789261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
258-543
               

               
Cow position:
               
chr27:2683235-2682950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
280-501
               

               
Cow position:
               
chr27:154295-154519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
280-540
               

               
Cow position:
               
chr27:29283476-29283218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
280-548
               

               
Cow position:
               
chr27:27259546-27259806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
281-631
               

               
Cow position:
               
chr27:30362179-30362528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 55
               

               
Conread position:
               
284-585
               

               
Cow position:
               
chr27:14902717-14902410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 154
               

               
Conread position:
               
288-461
               

               
Cow position:
               
chr27:4011619-4011793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 59
               

               
Conread position:
               
294-481
               

               
Cow position:
               
chr27:9697722-9697911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
295-492
               

               
Cow position:
               
chr27:20786341-20786539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 51
               

               
Conread position:
               
297-470
               

               
Cow position:
               
chr27:10395310-10395138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 153
               

               
Conread position:
               
305-548
               

               
Cow position:
               
chr27:29250837-29251078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
196, 24
               

               
Conread position:
               
306-603
               

               
Cow position:
               
chr27:16263300-16263590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
308-693
               

               
Cow position:
               
chr27:30856424-30856055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
331-526
               

               
Cow position:
               
chr27:27550759-27550571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
42, 84
               

               
Conread position:
               
348-545
               

               
Cow position:
               
chr27:22498557-22498748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 115
               

               
Conread position:
               
364-500
               

               
Cow position:
               
chr27:13376013-13375882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
366-718
               

               
Cow position:
               
chr27:22179776-22179416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 44
               

               
Conread position:
               
371-516
               

               
Cow position:
               
chr27:18434452-18434304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
373-718
               

               
Cow position:
               
chr27:28009035-28008705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 90
               
Show alignments to all cow chromosomes.