Cow genome map

Conread name: Thy1-THY010079D05

Conread position: 106-690
Cow position: chr28:31649282-31648696 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 44

Conread position: 107-712
Cow position: chr28:3746415-3745800 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 244

Conread position: 109-454
Cow position: chr28:3741087-3740740 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 238

Conread position: 110-259
Cow position: chr28:24238268-24238427 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 110-518
Cow position: chr28:29416510-29416923 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 167

Conread position: 110-712
Cow position: chr28:9285162-9285767 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 161

Conread position: 111-515
Cow position: chr28:6091570-6091157 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 193

Conread position: 112-372
Cow position: chr28:133867-134133 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 34

Conread position: 113-355
Cow position: chr28:5236086-5235836 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 238

Conread position: 113-360
Cow position: chr28:11059703-11059452 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 168

Conread position: 113-390
Cow position: chr28:5138786-5139078 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 215
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 113-411
Cow position: chr28:17601681-17601977 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 109

Conread position: 113-438
Cow position: chr28:11346277-11346614 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 226
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 237

Conread position: 113-475
Cow position: chr28:29988895-29989279 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 277
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 9, 252

Conread position: 113-570
Cow position: chr28:4016737-4016273 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 35

Conread position: 113-656
Cow position: chr28:33884614-33884062 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 216

Conread position: 113-690
Cow position: chr28:3023704-3024289 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 273

Conread position: 113-712
Cow position: chr28:11426335-11426940 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 433

Conread position: 113-718
Cow position: chr28:21868670-21868041 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 113-719
Cow position: chr28:4282277-4282903 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 181

Conread position: 113-745
Cow position: chr28:23616617-23615962 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 242

Conread position: 114-313
Cow position: chr28:30902332-30902122 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 114-327
Cow position: chr28:11016615-11016389 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 127

Conread position: 114-336
Cow position: chr28:17948905-17949140 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 114-379
Cow position: chr28:17012093-17012362 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 33

Conread position: 114-406
Cow position: chr28:4361262-4361531 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 31, 92

Conread position: 114-446
Cow position: chr28:19262373-19262726 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 238
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 224

Conread position: 114-492
Cow position: chr28:2131731-2132102 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 36

Conread position: 114-545
Cow position: chr28:21502593-21502162 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 75

Conread position: 114-663
Cow position: chr28:13267980-13267426 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 114-677
Cow position: chr28:34134061-34133487 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 18

Conread position: 115-323
Cow position: chr28:29850612-29850829 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 0

Conread position: 115-345
Cow position: chr28:6975444-6975206 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 231

Conread position: 115-548
Cow position: chr28:9636247-9636693 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 228

Conread position: 116-317
Cow position: chr28:18797520-18797312 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 76

Conread position: 116-371
Cow position: chr28:3275677-3275429 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 8, 35

Conread position: 116-382
Cow position: chr28:3410780-3411066 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 117-346
Cow position: chr28:8396533-8396297 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 72, 24

Conread position: 117-663
Cow position: chr28:8347942-8347367 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 244

Conread position: 117-718
Cow position: chr28:11527051-11527671 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 161

Conread position: 118-309
Cow position: chr28:4876645-4876443 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 157

Conread position: 118-471
Cow position: chr28:7439446-7439083 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 29, 66

Conread position: 118-663
Cow position: chr28:9426144-9426697 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 296

Conread position: 118-718
Cow position: chr28:21845158-21844546 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 28

Conread position: 118-718
Cow position: chr28:30293379-30293997 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 183

Conread position: 119-399
Cow position: chr28:7927367-7927084 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 17

Conread position: 119-515
Cow position: chr28:4089855-4090248 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 27, 13

Conread position: 119-690
Cow position: chr28:18934641-18934088 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 98

Conread position: 119-718
Cow position: chr28:23531069-23530454 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 26

Conread position: 120-287
Cow position: chr28:3678564-3678384 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 120-327
Cow position: chr28:4101717-4101502 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 65

Conread position: 120-333
Cow position: chr28:12991340-12991111 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 120-369
Cow position: chr28:4013288-4013027 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 227

Conread position: 120-374
Cow position: chr28:10978043-10977778 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 38

Conread position: 120-376
Cow position: chr28:3445274-3445549 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 191
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 154

Conread position: 120-377
Cow position: chr28:777881-777605 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 264

Conread position: 120-391
Cow position: chr28:4182207-4181921 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 224

Conread position: 120-446
Cow position: chr28:22571479-22571802 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 38, 31

Conread position: 120-460
Cow position: chr28:30746533-30746879 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 240
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 27, 48

Conread position: 120-475
Cow position: chr28:4643565-4643929 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 251
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 29, 242

Conread position: 120-481
Cow position: chr28:32366023-32365676 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 47

Conread position: 120-498
Cow position: chr28:11866463-11866855 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 279

Conread position: 120-500
Cow position: chr28:23724264-23724643 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 30, 71

Conread position: 120-501
Cow position: chr28:4834638-4835034 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 48

Conread position: 120-501
Cow position: chr28:30937478-30937855 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 30

Conread position: 120-516
Cow position: chr28:5074316-5074709 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 70

Conread position: 120-516
Cow position: chr28:5436881-5437296 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 120-543
Cow position: chr28:5144309-5144754 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 244

Conread position: 120-544
Cow position: chr28:26719535-26719128 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 120-545
Cow position: chr28:11884326-11884756 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 32

Conread position: 120-548
Cow position: chr28:11422614-11423040 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 120-548
Cow position: chr28:16369884-16370310 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 226

Conread position: 120-667
Cow position: chr28:16918969-16919520 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 149

Conread position: 120-676
Cow position: chr28:5827136-5826580 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 106

Conread position: 120-718
Cow position: chr28:8787744-8787150 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 143

Conread position: 120-718
Cow position: chr28:20124986-20124379 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 361

Conread position: 120-718
Cow position: chr28:25057161-25056560 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 120-744
Cow position: chr28:4071163-4070529 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 30

Conread position: 120-752
Cow position: chr28:30326896-30327527 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 151

Conread position: 121-308
Cow position: chr28:24996413-24996612 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 121-311
Cow position: chr28:26784052-26784243 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 72

Conread position: 121-327
Cow position: chr28:5255075-5254856 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 121-335
Cow position: chr28:5205455-5205245 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 50

Conread position: 121-348
Cow position: chr28:17740029-17739785 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 178

Conread position: 121-349
Cow position: chr28:11816480-11816707 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 177
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 91, 29

Conread position: 121-369
Cow position: chr28:4823805-4823547 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 94

Conread position: 121-378
Cow position: chr28:7618956-7619222 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 57

Conread position: 121-392
Cow position: chr28:7350854-7350574 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 68, 25

Conread position: 121-396
Cow position: chr28:7131887-7132162 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 160

Conread position: 121-422
Cow position: chr28:22813452-22813152 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 150

Conread position: 121-441
Cow position: chr28:8140688-8140350 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 222

Conread position: 121-499
Cow position: chr28:11828755-11829129 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 164

Conread position: 121-501
Cow position: chr28:32735268-32734904 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 253
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 65

Conread position: 121-509
Cow position: chr28:4809974-4809596 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 121-518
Cow position: chr28:4884049-4884473 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 289

Conread position: 121-530
Cow position: chr28:10053128-10053557 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 294
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 68, 29

Conread position: 121-568
Cow position: chr28:3492583-3493044 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 178

Conread position: 121-643
Cow position: chr28:5204389-5203870 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 121-644
Cow position: chr28:23676318-23675812 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 64

Conread position: 121-718
Cow position: chr28:5684904-5684294 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 204

Conread position: 121-718
Cow position: chr28:10588829-10589436 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 72

Conread position: 121-718
Cow position: chr28:11585005-11585617 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 354

Conread position: 121-718
Cow position: chr28:24966590-24965975 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 194

Conread position: 122-303
Cow position: chr28:9109414-9109222 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 122-548
Cow position: chr28:23793117-23793537 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 122-607
Cow position: chr28:23007539-23008027 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 69

Conread position: 123-286
Cow position: chr28:10203314-10203142 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 123-361
Cow position: chr28:2762374-2762142 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 24, 68

Conread position: 123-461
Cow position: chr28:616571-616232 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 24, 61

Conread position: 123-543
Cow position: chr28:3078494-3078909 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 49

Conread position: 123-545
Cow position: chr28:9740660-9740238 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 258

Conread position: 123-718
Cow position: chr28:7865507-7864921 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 62

Conread position: 123-718
Cow position: chr28:24672470-24671861 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 281

Conread position: 126-332
Cow position: chr28:8304441-8304224 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 20, 158

Conread position: 126-419
Cow position: chr28:19564036-19564338 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 258

Conread position: 126-463
Cow position: chr28:24082469-24082116 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 280

Conread position: 126-542
Cow position: chr28:1099478-1099872 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 289
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 65

Conread position: 126-542
Cow position: chr28:12951615-12951202 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 21, 166

Conread position: 126-712
Cow position: chr28:7267750-7268343 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 146

Conread position: 126-715
Cow position: chr28:5931543-5930944 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 63

Conread position: 126-718
Cow position: chr28:13474498-13473902 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 210

Conread position: 126-721
Cow position: chr28:26615052-26614482 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 94

Conread position: 127-424
Cow position: chr28:25129082-25128768 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 52

Conread position: 129-621
Cow position: chr28:24343549-24343059 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 328
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 18, 98

Conread position: 130-548
Cow position: chr28:23410139-23410560 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 61

Conread position: 131-714
Cow position: chr28:14998258-14997658 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 318

Conread position: 132-721
Cow position: chr28:5818031-5817435 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 218

Conread position: 133-314
Cow position: chr28:16879760-16879568 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 133-538
Cow position: chr28:13866015-13865619 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 91

Conread position: 133-718
Cow position: chr28:3914897-3914300 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 51

Conread position: 133-718
Cow position: chr28:16346346-16346925 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 136

Conread position: 144-721
Cow position: chr28:30303029-30303600 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 89

Conread position: 145-352
Cow position: chr28:7497991-7498192 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 28

Conread position: 146-712
Cow position: chr28:21598093-21598657 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 23

Conread position: 147-718
Cow position: chr28:16085490-16084917 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 15

Conread position: 153-314
Cow position: chr28:25675355-25675510 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 65

Conread position: 153-697
Cow position: chr28:28765756-28766299 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 154-548
Cow position: chr28:22346168-22345783 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 18

Conread position: 154-574
Cow position: chr28:34230374-34229963 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 156-691
Cow position: chr28:6971200-6971722 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 63

Conread position: 156-718
Cow position: chr28:19222008-19222555 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 9

Conread position: 159-454
Cow position: chr28:10863652-10863927 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 209
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 178, 12

Conread position: 164-545
Cow position: chr28:2899126-2898762 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 178-496
Cow position: chr28:9684211-9684504 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 149, 37

Conread position: 179-430
Cow position: chr28:11079422-11079185 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 196
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 161, 10

Conread position: 179-512
Cow position: chr28:14512655-14512325 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 104, 37

Conread position: 180-387
Cow position: chr28:11348543-11348351 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 180-422
Cow position: chr28:5577651-5577412 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 7, 37

Conread position: 180-433
Cow position: chr28:32174750-32174507 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 108, 36

Conread position: 180-444
Cow position: chr28:3449433-3449164 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 180-453
Cow position: chr28:27161206-27161474 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 167, 36

Conread position: 180-499
Cow position: chr28:4881119-4881431 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 193, 36

Conread position: 180-543
Cow position: chr28:33052157-33051789 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 19

Conread position: 180-548
Cow position: chr28:19025884-19026239 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 35

Conread position: 180-548
Cow position: chr28:26220377-26220025 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 39

Conread position: 180-549
Cow position: chr28:29434307-29434662 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 36

Conread position: 180-590
Cow position: chr28:26743747-26743340 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 180-643
Cow position: chr28:7697861-7698312 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 180-645
Cow position: chr28:22371546-22372012 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 180-647
Cow position: chr28:2960709-2961157 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 36

Conread position: 180-695
Cow position: chr28:22332649-22332163 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 35

Conread position: 180-718
Cow position: chr28:662229-661701 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 34

Conread position: 180-718
Cow position: chr28:21355352-21354814 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 25

Conread position: 180-718
Cow position: chr28:25249475-25248957 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 36

Conread position: 180-718
Cow position: chr28:26922247-26922786 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 180-718
Cow position: chr28:29199851-29199318 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 37

Conread position: 181-411
Cow position: chr28:7372002-7372224 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 192, 35

Conread position: 181-518
Cow position: chr28:11817844-11818167 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 159, 38

Conread position: 181-693
Cow position: chr28:19079725-19080256 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 362
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 19, 24

Conread position: 182-364
Cow position: chr28:4438831-4438655 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 155, 13

Conread position: 182-496
Cow position: chr28:2752375-2752684 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 165, 34

Conread position: 182-500
Cow position: chr28:26982619-26982934 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 141, 34

Conread position: 182-624
Cow position: chr28:6059351-6059784 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 34

Conread position: 183-411
Cow position: chr28:7388654-7388869 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 190, 33

Conread position: 183-548
Cow position: chr28:10172299-10172650 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 33

Conread position: 183-712
Cow position: chr28:11752021-11752551 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 33

Conread position: 183-712
Cow position: chr28:20313395-20312869 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 33

Conread position: 184-719
Cow position: chr28:18354210-18354715 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 33

Conread position: 191-511
Cow position: chr28:18186678-18186345 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 122

Conread position: 192-323
Cow position: chr28:3147598-3147468 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 76

Conread position: 193-718
Cow position: chr28:25806688-25806187 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 26

Conread position: 204-712
Cow position: chr28:4536564-4536077 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 144

Conread position: 210-751
Cow position: chr28:5792808-5792263 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 132

Conread position: 211-542
Cow position: chr28:8408834-8408509 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 135

Conread position: 221-548
Cow position: chr28:5236514-5236836 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 5, 117

Conread position: 221-596
Cow position: chr28:31109914-31110293 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 125

Conread position: 222-718
Cow position: chr28:10529403-10529875 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 108

Conread position: 223-518
Cow position: chr28:25283280-25282998 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 194, 42

Conread position: 223-712
Cow position: chr28:16211015-16211496 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 147

Conread position: 223-717
Cow position: chr28:21672879-21672404 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 56

Conread position: 223-718
Cow position: chr28:11786631-11787116 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 118

Conread position: 223-718
Cow position: chr28:20409473-20408973 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 27

Conread position: 223-718
Cow position: chr28:26103788-26103317 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 63

Conread position: 224-639
Cow position: chr28:15043777-15044184 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 40

Conread position: 225-548
Cow position: chr28:4841306-4841633 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 41, 149

Conread position: 226-367
Cow position: chr28:26531194-26531339 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 95, 120

Conread position: 226-390
Cow position: chr28:12070314-12070154 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 102, 61

Conread position: 226-467
Cow position: chr28:2873002-2872758 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 148

Conread position: 226-510
Cow position: chr28:4159038-4158753 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 145

Conread position: 226-526
Cow position: chr28:24018067-24017789 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 219
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 174, 51

Conread position: 226-542
Cow position: chr28:14649425-14649118 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 21

Conread position: 226-548
Cow position: chr28:25596711-25596396 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 39

Conread position: 226-567
Cow position: chr28:16204251-16204589 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 110

Conread position: 226-710
Cow position: chr28:8022020-8022513 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 29

Conread position: 226-710
Cow position: chr28:18591353-18590860 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 51

Conread position: 226-712
Cow position: chr28:12892354-12892807 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 57

Conread position: 227-548
Cow position: chr28:2862950-2862625 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 136

Conread position: 227-606
Cow position: chr28:31987696-31987306 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 131

Conread position: 227-627
Cow position: chr28:4307815-4308217 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 227-703
Cow position: chr28:21380963-21380484 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 305

Conread position: 230-488
Cow position: chr28:14720705-14720953 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 180
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 141, 82

Conread position: 230-498
Cow position: chr28:17235657-17235914 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 54

Conread position: 230-533
Cow position: chr28:18625313-18625001 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 217
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 90, 0

Conread position: 230-538
Cow position: chr28:27218401-27218094 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 22

Conread position: 230-677
Cow position: chr28:10745293-10744836 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 239

Conread position: 230-703
Cow position: chr28:12947028-12946549 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 139

Conread position: 230-712
Cow position: chr28:4138592-4139082 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 92

Conread position: 230-718
Cow position: chr28:10681746-10682231 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 28

Conread position: 230-718
Cow position: chr28:11686949-11687444 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 12

Conread position: 231-335
Cow position: chr28:17393855-17393750 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 231-463
Cow position: chr28:4440374-4440149 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 89

Conread position: 231-478
Cow position: chr28:3169111-3169361 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 68

Conread position: 231-511
Cow position: chr28:27313654-27313948 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 87, 140

Conread position: 231-548
Cow position: chr28:13607976-13607649 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 43, 126

Conread position: 231-548
Cow position: chr28:31841269-31841576 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 212, 17

Conread position: 231-618
Cow position: chr28:10669662-10669264 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 276
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 33, 28

Conread position: 231-633
Cow position: chr28:12619653-12619240 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 360

Conread position: 231-675
Cow position: chr28:34442680-34443130 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 304
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 78

Conread position: 231-712
Cow position: chr28:21103750-21104248 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 232-548
Cow position: chr28:34430346-34430663 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 140, 109

Conread position: 233-720
Cow position: chr28:10533859-10534346 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 68

Conread position: 234-667
Cow position: chr28:5128654-5129071 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 139

Conread position: 235-416
Cow position: chr28:12363083-12363268 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 238-643
Cow position: chr28:14934029-14933627 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 84

Conread position: 240-462
Cow position: chr28:10057518-10057745 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 67

Conread position: 240-545
Cow position: chr28:33036404-33036699 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 205
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 88, 34

Conread position: 240-646
Cow position: chr28:7548989-7549400 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 187

Conread position: 243-692
Cow position: chr28:4588163-4587712 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 245-548
Cow position: chr28:4914027-4914338 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 245-548
Cow position: chr28:22485317-22485012 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 75, 134

Conread position: 247-718
Cow position: chr28:7751239-7751697 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 26

Conread position: 248-498
Cow position: chr28:18759985-18760228 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 98

Conread position: 248-530
Cow position: chr28:2737745-2738030 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 249-714
Cow position: chr28:3256858-3256396 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 77

Conread position: 252-548
Cow position: chr28:4058039-4057750 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 17, 22

Conread position: 267-693
Cow position: chr28:5904774-5904350 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 79

Conread position: 272-493
Cow position: chr28:28903626-28903847 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 182

Conread position: 278-462
Cow position: chr28:7607945-7608133 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 284-567
Cow position: chr28:16252831-16253114 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 169

Conread position: 284-700
Cow position: chr28:8681814-8682241 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 44

Conread position: 287-549
Cow position: chr28:24646561-24646303 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 89

Conread position: 287-633
Cow position: chr28:19222580-19222919 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 35

Conread position: 290-478
Cow position: chr28:14983272-14983083 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 159

Conread position: 291-501
Cow position: chr28:118032-118244 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 147

Conread position: 291-526
Cow position: chr28:7980399-7980633 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 39, 82

Conread position: 291-544
Cow position: chr28:10212699-10212930 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 291-634
Cow position: chr28:4880246-4880590 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 85

Conread position: 293-548
Cow position: chr28:32747936-32747703 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 36

Conread position: 294-474
Cow position: chr28:657436-657613 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 33, 78

Conread position: 298-760
Cow position: chr28:22170698-22171184 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 175

Conread position: 299-596
Cow position: chr28:29455644-29455940 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 167

Conread position: 301-676
Cow position: chr28:16363957-16364339 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 156

Conread position: 306-488
Cow position: chr28:26264812-26264628 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 160

Conread position: 307-548
Cow position: chr28:27428749-27428516 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 181
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 122

Conread position: 321-568
Cow position: chr28:16243766-16244019 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 11, 82

Conread position: 327-497
Cow position: chr28:13290150-13290319 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 146, 0

Conread position: 331-748
Cow position: chr28:11827467-11827057 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 92, 45

Conread position: 332-625
Cow position: chr28:15008141-15007845 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 208
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 105

Conread position: 333-548
Cow position: chr28:8348675-8348889 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 167
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 168, 27

Conread position: 333-694
Cow position: chr28:19295381-19295749 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 115

Conread position: 335-718
Cow position: chr28:11451489-11451884 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 27

Conread position: 338-557
Cow position: chr28:28076438-28076653 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 111

Conread position: 340-667
Cow position: chr28:17738105-17738437 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 11

Conread position: 373-716
Cow position: chr28:20759984-20760331 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 153

Conread position: 374-647
Cow position: chr28:16441318-16441051 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 207
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 43, 91

Conread position: 386-658
Cow position: chr28:5054099-5054376 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 238

Conread position: 535-718
Cow position: chr28:7980930-7981113 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.