Cow genome map

Conread name: Thy1-THY010079D05

Conread position: 80-548
Cow position: chr6:4383753-4383291 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 17

Conread position: 99-411
Cow position: chr6:9302463-9302784 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 28

Conread position: 107-407
Cow position: chr6:18117794-18118116 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 19, 185

Conread position: 112-367
Cow position: chr6:30024126-30023870 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 39

Conread position: 113-314
Cow position: chr6:51933786-51933584 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 64

Conread position: 113-327
Cow position: chr6:1866978-1866749 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 209

Conread position: 113-345
Cow position: chr6:57320351-57320584 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 121

Conread position: 113-369
Cow position: chr6:62056859-62056587 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 9, 0

Conread position: 113-371
Cow position: chr6:67451416-67451673 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 191
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 9, 92

Conread position: 113-381
Cow position: chr6:66570672-66570399 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 89, 37

Conread position: 113-411
Cow position: chr6:16287819-16288120 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 14, 76

Conread position: 113-455
Cow position: chr6:10039973-10039609 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 45

Conread position: 113-455
Cow position: chr6:36645621-36645276 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 229
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 171

Conread position: 113-465
Cow position: chr6:22850005-22850368 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 180

Conread position: 113-500
Cow position: chr6:77690-78065 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 251
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 259, 76

Conread position: 113-500
Cow position: chr6:31846997-31847373 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 115

Conread position: 113-518
Cow position: chr6:47575138-47574733 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 71

Conread position: 113-521
Cow position: chr6:60819762-60819340 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 292
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 141

Conread position: 113-696
Cow position: chr6:5609195-5609803 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 198

Conread position: 114-341
Cow position: chr6:21470185-21470426 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 114-394
Cow position: chr6:50504702-50504401 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 114-487
Cow position: chr6:28155927-28156286 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 151

Conread position: 114-718
Cow position: chr6:16700501-16699895 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 218

Conread position: 115-339
Cow position: chr6:29775863-29775628 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 32, 226

Conread position: 115-481
Cow position: chr6:53674087-53673729 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 48

Conread position: 115-500
Cow position: chr6:7128159-7128553 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 307

Conread position: 115-702
Cow position: chr6:10105738-10106360 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 35

Conread position: 115-717
Cow position: chr6:32866976-32867581 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 62

Conread position: 116-339
Cow position: chr6:61110026-61109792 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 141

Conread position: 116-545
Cow position: chr6:21231756-21231337 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 217

Conread position: 116-719
Cow position: chr6:45690375-45690986 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 117-388
Cow position: chr6:47305929-47306183 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 74

Conread position: 118-440
Cow position: chr6:13565328-13564987 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 15

Conread position: 118-445
Cow position: chr6:1429876-1429537 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 32, 234

Conread position: 118-517
Cow position: chr6:17313980-17313559 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 288
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 256

Conread position: 118-548
Cow position: chr6:50090887-50090438 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 289
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 29, 223

Conread position: 118-675
Cow position: chr6:35726332-35725757 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 73

Conread position: 118-718
Cow position: chr6:17414208-17414829 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 32

Conread position: 119-447
Cow position: chr6:60273770-60274110 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 20

Conread position: 119-496
Cow position: chr6:9219504-9219124 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 265
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 78

Conread position: 119-518
Cow position: chr6:1704036-1703642 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 281
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 28

Conread position: 119-667
Cow position: chr6:26728303-26728851 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 27

Conread position: 119-718
Cow position: chr6:63196940-63197550 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 103

Conread position: 119-719
Cow position: chr6:64432174-64431570 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 298

Conread position: 120-276
Cow position: chr6:43540022-43540182 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 71

Conread position: 120-315
Cow position: chr6:41226607-41226800 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 30

Conread position: 120-326
Cow position: chr6:5820020-5820229 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 51

Conread position: 120-333
Cow position: chr6:1475577-1475356 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 120-341
Cow position: chr6:42035010-42034775 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 154

Conread position: 120-355
Cow position: chr6:47884805-47885033 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 92

Conread position: 120-369
Cow position: chr6:68685780-68685529 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 77

Conread position: 120-371
Cow position: chr6:19259118-19259372 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 27, 104

Conread position: 120-375
Cow position: chr6:54082774-54083022 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 181, 26

Conread position: 120-439
Cow position: chr6:19293038-19292702 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 231
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 27, 271

Conread position: 120-446
Cow position: chr6:26043975-26043649 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 221
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 163

Conread position: 120-449
Cow position: chr6:14913994-14914351 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 27, 49

Conread position: 120-451
Cow position: chr6:59602975-59603315 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 120-461
Cow position: chr6:45064795-45065132 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 102

Conread position: 120-463
Cow position: chr6:25614850-25615222 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 263
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 27, 348

Conread position: 120-472
Cow position: chr6:11192240-11192596 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 120-517
Cow position: chr6:27888583-27888179 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 279
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 72, 29

Conread position: 120-545
Cow position: chr6:15300600-15301016 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 154

Conread position: 120-545
Cow position: chr6:53024571-53024997 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 89

Conread position: 120-548
Cow position: chr6:8966328-8965888 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 195

Conread position: 120-568
Cow position: chr6:51581015-51581485 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 166

Conread position: 120-603
Cow position: chr6:49421556-49422043 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 333
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 37

Conread position: 120-690
Cow position: chr6:45596306-45596872 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 374
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 26, 353

Conread position: 120-690
Cow position: chr6:56850257-56849654 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 349

Conread position: 120-703
Cow position: chr6:28477389-28476817 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 386
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 27, 101

Conread position: 120-712
Cow position: chr6:10613070-10612487 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 109

Conread position: 120-712
Cow position: chr6:32122135-32121528 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 60

Conread position: 120-712
Cow position: chr6:65871271-65870656 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 136

Conread position: 120-715
Cow position: chr6:4864334-4864911 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 12

Conread position: 120-717
Cow position: chr6:36652639-36652049 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 93

Conread position: 120-718
Cow position: chr6:4469006-4468384 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 198

Conread position: 120-718
Cow position: chr6:13687577-13688193 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 15

Conread position: 120-718
Cow position: chr6:37635009-37634415 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 63

Conread position: 120-718
Cow position: chr6:40032419-40031817 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 120-718
Cow position: chr6:48567120-48567721 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 58

Conread position: 120-718
Cow position: chr6:61631368-61631989 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 26

Conread position: 120-721
Cow position: chr6:43345200-43345833 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 90

Conread position: 120-723
Cow position: chr6:8804303-8804925 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 71

Conread position: 120-749
Cow position: chr6:8562954-8562312 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 121-320
Cow position: chr6:16091136-16090927 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 121-327
Cow position: chr6:43651963-43651769 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 121-367
Cow position: chr6:26155384-26155128 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 14

Conread position: 121-370
Cow position: chr6:67451133-67451399 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 67, 20

Conread position: 121-376
Cow position: chr6:48097364-48097634 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 29

Conread position: 121-388
Cow position: chr6:2078577-2078865 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 26, 0

Conread position: 121-395
Cow position: chr6:60143960-60144251 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 26, 236

Conread position: 121-407
Cow position: chr6:60468470-60468173 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 61, 29

Conread position: 121-417
Cow position: chr6:17068416-17068723 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 121-419
Cow position: chr6:693906-694223 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 228

Conread position: 121-471
Cow position: chr6:62670110-62669746 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 26, 230

Conread position: 121-501
Cow position: chr6:120476-120085 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 121-510
Cow position: chr6:899082-899454 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 63

Conread position: 121-534
Cow position: chr6:50577754-50577332 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 121-548
Cow position: chr6:44194317-44194747 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 121-548
Cow position: chr6:55282053-55282491 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 219

Conread position: 121-565
Cow position: chr6:46859932-46860390 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 11

Conread position: 121-568
Cow position: chr6:24468160-24468618 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 208

Conread position: 121-647
Cow position: chr6:46558293-46557753 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 227

Conread position: 121-707
Cow position: chr6:23696233-23695633 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 29

Conread position: 121-713
Cow position: chr6:32287870-32287248 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 91

Conread position: 121-717
Cow position: chr6:8637506-8636901 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 36

Conread position: 121-718
Cow position: chr6:143139-143735 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 181

Conread position: 121-718
Cow position: chr6:21004919-21004280 (view UCSC Genome Browser custom track)
Alignm length: 644
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 223

Conread position: 121-718
Cow position: chr6:29210716-29210126 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 69

Conread position: 122-332
Cow position: chr6:60850937-60850712 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 122-548
Cow position: chr6:54490508-54490942 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 296
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 24, 140

Conread position: 123-717
Cow position: chr6:38771508-38770930 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 147

Conread position: 123-719
Cow position: chr6:46466055-46465451 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 219

Conread position: 124-718
Cow position: chr6:29485319-29484736 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 229

Conread position: 125-718
Cow position: chr6:49398394-49398993 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 193

Conread position: 126-369
Cow position: chr6:49437565-49437307 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 20

Conread position: 126-389
Cow position: chr6:3351262-3350973 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 126-420
Cow position: chr6:22985628-22985935 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 0

Conread position: 126-429
Cow position: chr6:37463239-37462936 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 21, 97

Conread position: 126-453
Cow position: chr6:58370981-58370643 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 141

Conread position: 126-463
Cow position: chr6:23401761-23402109 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 150

Conread position: 126-501
Cow position: chr6:19264267-19264654 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 24

Conread position: 126-509
Cow position: chr6:26450533-26450154 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 71

Conread position: 126-525
Cow position: chr6:52901451-52901062 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 21, 93

Conread position: 126-536
Cow position: chr6:65903392-65903807 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 278
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 229

Conread position: 126-542
Cow position: chr6:12652414-12652010 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 267
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 234, 25

Conread position: 126-545
Cow position: chr6:36203055-36202629 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 158

Conread position: 126-546
Cow position: chr6:57404902-57405324 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 293
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 21, 88

Conread position: 126-548
Cow position: chr6:17997083-17997517 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 172

Conread position: 126-548
Cow position: chr6:35436221-35435801 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 289
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 283

Conread position: 126-624
Cow position: chr6:61514964-61515481 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 126-627
Cow position: chr6:38218875-38218379 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 37

Conread position: 126-634
Cow position: chr6:47520288-47519759 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 299

Conread position: 126-654
Cow position: chr6:15937618-15938175 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 237

Conread position: 126-686
Cow position: chr6:36196436-36195869 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 30

Conread position: 126-690
Cow position: chr6:55475471-55474902 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 96

Conread position: 126-704
Cow position: chr6:31535339-31535920 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 290

Conread position: 126-718
Cow position: chr6:13367516-13366923 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 196

Conread position: 126-718
Cow position: chr6:24031597-24030999 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 67

Conread position: 126-718
Cow position: chr6:32268653-32269231 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 406
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 19, 169

Conread position: 127-459
Cow position: chr6:21061658-21062008 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 149

Conread position: 127-546
Cow position: chr6:7189898-7190319 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 192

Conread position: 127-656
Cow position: chr6:12338223-12337671 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 360

Conread position: 127-716
Cow position: chr6:18988424-18987846 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 127-732
Cow position: chr6:39358110-39358726 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 178

Conread position: 128-481
Cow position: chr6:60118374-60118012 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 246
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 209

Conread position: 130-711
Cow position: chr6:39093975-39093394 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 132-534
Cow position: chr6:47799507-47799110 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 33

Conread position: 133-590
Cow position: chr6:54133038-54132571 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 43

Conread position: 133-731
Cow position: chr6:63047803-63047194 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 91

Conread position: 135-393
Cow position: chr6:37466302-37466052 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 10, 71

Conread position: 136-479
Cow position: chr6:28999733-29000058 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 11, 55

Conread position: 137-378
Cow position: chr6:34119140-34119390 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 8, 141

Conread position: 138-400
Cow position: chr6:60517020-60516771 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 254, 26

Conread position: 144-747
Cow position: chr6:9008412-9009005 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 47

Conread position: 146-378
Cow position: chr6:36920763-36921009 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 147

Conread position: 148-541
Cow position: chr6:63720402-63720004 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 327

Conread position: 149-382
Cow position: chr6:55535566-55535788 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 173, 15

Conread position: 149-415
Cow position: chr6:29248667-29248419 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 70

Conread position: 153-459
Cow position: chr6:21514426-21514735 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 27

Conread position: 153-712
Cow position: chr6:6060391-6060927 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 11

Conread position: 153-718
Cow position: chr6:5095360-5095926 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 27

Conread position: 154-573
Cow position: chr6:34475380-34475774 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 280
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 218, 17

Conread position: 156-443
Cow position: chr6:61269513-61269209 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 217
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 157-549
Cow position: chr6:528089-528479 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 181

Conread position: 160-427
Cow position: chr6:20929331-20929600 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 29

Conread position: 164-489
Cow position: chr6:38610147-38609826 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 219
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 62, 40

Conread position: 164-627
Cow position: chr6:54867687-54867227 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 15

Conread position: 164-701
Cow position: chr6:2547428-2546885 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 165-509
Cow position: chr6:15243426-15243088 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 51

Conread position: 172-530
Cow position: chr6:25008891-25008530 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 31, 59

Conread position: 175-393
Cow position: chr6:68652190-68652403 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 42

Conread position: 175-449
Cow position: chr6:17794603-17794862 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 198, 41

Conread position: 175-548
Cow position: chr6:49002573-49002926 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 257
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 147, 29

Conread position: 178-446
Cow position: chr6:60667568-60667315 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 193, 38

Conread position: 178-501
Cow position: chr6:58590431-58590120 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 143, 38

Conread position: 178-515
Cow position: chr6:35993739-35993408 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 10

Conread position: 178-519
Cow position: chr6:47355979-47355651 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 244
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 167, 14

Conread position: 178-583
Cow position: chr6:26915486-26915089 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 37

Conread position: 178-712
Cow position: chr6:52478253-52478812 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 38

Conread position: 178-722
Cow position: chr6:51675065-51674530 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 29

Conread position: 179-500
Cow position: chr6:60740171-60739862 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 194, 37

Conread position: 179-624
Cow position: chr6:6264810-6264364 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 306
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 37

Conread position: 179-718
Cow position: chr6:42565844-42565309 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 25

Conread position: 180-365
Cow position: chr6:53090164-53089986 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 160, 19

Conread position: 180-410
Cow position: chr6:37395244-37395475 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 38

Conread position: 180-421
Cow position: chr6:67282050-67281819 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 160, 37

Conread position: 180-443
Cow position: chr6:61524049-61524301 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 161, 36

Conread position: 180-444
Cow position: chr6:3592553-3592300 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 129, 36

Conread position: 180-461
Cow position: chr6:582117-582389 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 190, 36

Conread position: 180-463
Cow position: chr6:377287-377011 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 194
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 11

Conread position: 180-476
Cow position: chr6:53841350-53841632 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 164, 36

Conread position: 180-480
Cow position: chr6:38640389-38640094 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 36

Conread position: 180-483
Cow position: chr6:21235199-21234904 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 211
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 97, 36

Conread position: 180-494
Cow position: chr6:57571635-57571326 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 37

Conread position: 180-495
Cow position: chr6:46282848-46283146 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 136, 35

Conread position: 180-500
Cow position: chr6:57546073-57546369 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 225
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 193, 36

Conread position: 180-516
Cow position: chr6:8125482-8125162 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 232
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 142, 22

Conread position: 180-516
Cow position: chr6:15447042-15447378 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 37

Conread position: 180-538
Cow position: chr6:9452614-9452965 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 9

Conread position: 180-542
Cow position: chr6:16423866-16423503 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 180-542
Cow position: chr6:28976884-28977225 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 36

Conread position: 180-548
Cow position: chr6:38441328-38440980 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 36

Conread position: 180-548
Cow position: chr6:40774176-40774550 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 254
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 36

Conread position: 180-548
Cow position: chr6:53652196-53651838 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 27

Conread position: 180-564
Cow position: chr6:38207336-38207717 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 15

Conread position: 180-568
Cow position: chr6:37149345-37148973 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 180-585
Cow position: chr6:54990845-54991235 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 36

Conread position: 180-590
Cow position: chr6:15242992-15242588 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 36

Conread position: 180-674
Cow position: chr6:10176146-10176630 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 36

Conread position: 180-690
Cow position: chr6:35990078-35990574 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 36

Conread position: 180-693
Cow position: chr6:35842813-35842310 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 25

Conread position: 180-694
Cow position: chr6:24781404-24781916 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 180-711
Cow position: chr6:8209449-8209952 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 180-712
Cow position: chr6:6067545-6068058 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 24

Conread position: 180-712
Cow position: chr6:9750901-9751421 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 36

Conread position: 181-459
Cow position: chr6:58597350-58597620 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 36

Conread position: 181-545
Cow position: chr6:67456873-67456504 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 199, 21

Conread position: 181-718
Cow position: chr6:12551427-12550892 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 37

Conread position: 182-545
Cow position: chr6:67951103-67950760 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 36

Conread position: 182-548
Cow position: chr6:66131458-66131106 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 262
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 175, 13

Conread position: 183-411
Cow position: chr6:33929394-33929618 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 139, 34

Conread position: 183-422
Cow position: chr6:2623926-2623703 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 190, 31

Conread position: 183-546
Cow position: chr6:63298878-63299223 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 157, 34

Conread position: 183-548
Cow position: chr6:38641645-38641296 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 183-717
Cow position: chr6:67214902-67214367 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 25

Conread position: 183-736
Cow position: chr6:16707165-16706615 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 33

Conread position: 184-712
Cow position: chr6:18048869-18049395 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 17

Conread position: 184-718
Cow position: chr6:6343582-6343046 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 32

Conread position: 184-718
Cow position: chr6:35103176-35103698 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 185-542
Cow position: chr6:5113903-5114242 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 10

Conread position: 186-545
Cow position: chr6:8787887-8788236 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 254
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 158, 31

Conread position: 188-439
Cow position: chr6:68376163-68376417 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 82

Conread position: 188-568
Cow position: chr6:21869489-21869871 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 190

Conread position: 188-645
Cow position: chr6:31526199-31525749 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 38

Conread position: 189-473
Cow position: chr6:61168912-61168645 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 202
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 141

Conread position: 189-567
Cow position: chr6:16103039-16103427 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 266
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 23, 91

Conread position: 191-369
Cow position: chr6:60266038-60266207 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 149, 27

Conread position: 191-541
Cow position: chr6:21456528-21456885 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 191-613
Cow position: chr6:54365175-54365594 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 116

Conread position: 191-638
Cow position: chr6:60057502-60057961 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 155

Conread position: 195-446
Cow position: chr6:59718937-59718693 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 123, 21

Conread position: 206-718
Cow position: chr6:56843295-56842784 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 63

Conread position: 209-538
Cow position: chr6:28318533-28318217 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 66

Conread position: 211-548
Cow position: chr6:38614947-38614622 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 56

Conread position: 220-481
Cow position: chr6:45388450-45388192 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 173
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 6, 30

Conread position: 220-518
Cow position: chr6:30974166-30973869 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 153, 51

Conread position: 221-499
Cow position: chr6:4691851-4692136 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 109

Conread position: 221-500
Cow position: chr6:50984347-50984071 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 5, 103

Conread position: 221-506
Cow position: chr6:55763978-55763694 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 5, 78

Conread position: 223-332
Cow position: chr6:1871077-1871186 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 223-391
Cow position: chr6:31078747-31078920 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 122

Conread position: 223-513
Cow position: chr6:47640311-47640604 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 243

Conread position: 223-548
Cow position: chr6:31261115-31260785 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 96, 113

Conread position: 223-633
Cow position: chr6:7130759-7131162 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 155

Conread position: 223-674
Cow position: chr6:35613296-35613759 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 128

Conread position: 224-370
Cow position: chr6:63065949-63065798 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 224-371
Cow position: chr6:32853307-32853159 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 117, 49

Conread position: 224-412
Cow position: chr6:67643571-67643760 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 149, 0

Conread position: 224-493
Cow position: chr6:16316437-16316160 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 5, 160

Conread position: 224-535
Cow position: chr6:6401071-6400759 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 42

Conread position: 224-544
Cow position: chr6:12091873-12092182 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 117, 124

Conread position: 224-583
Cow position: chr6:9736537-9736880 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 49

Conread position: 224-601
Cow position: chr6:27110717-27110328 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 114, 65

Conread position: 224-627
Cow position: chr6:57164549-57164142 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 243

Conread position: 225-518
Cow position: chr6:1499760-1499466 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 5

Conread position: 226-382
Cow position: chr6:32516991-32517139 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 147, 40

Conread position: 226-400
Cow position: chr6:59770342-59770170 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 96, 23

Conread position: 226-439
Cow position: chr6:66375215-66375426 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 147, 99

Conread position: 226-499
Cow position: chr6:48112314-48112052 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 147, 52

Conread position: 226-501
Cow position: chr6:61608630-61608353 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 0

Conread position: 226-548
Cow position: chr6:23247848-23248165 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 45

Conread position: 226-567
Cow position: chr6:60350174-60350524 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 226-568
Cow position: chr6:66874469-66874136 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 76

Conread position: 226-718
Cow position: chr6:14958222-14958718 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 107

Conread position: 227-371
Cow position: chr6:12197297-12197150 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 227-487
Cow position: chr6:15022430-15022701 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 221

Conread position: 227-548
Cow position: chr6:7989298-7989615 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 96

Conread position: 227-691
Cow position: chr6:15305685-15305240 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 38

Conread position: 227-701
Cow position: chr6:445440-444968 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 315

Conread position: 229-656
Cow position: chr6:60859186-60859617 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 97

Conread position: 230-413
Cow position: chr6:5845057-5845241 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 115

Conread position: 230-443
Cow position: chr6:27239892-27240106 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 143, 0

Conread position: 230-446
Cow position: chr6:54208021-54208242 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 204

Conread position: 230-458
Cow position: chr6:55209671-55209441 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 99, 43

Conread position: 230-463
Cow position: chr6:16261892-16261666 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 90, 65

Conread position: 230-463
Cow position: chr6:50976162-50975938 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 141, 0

Conread position: 230-478
Cow position: chr6:1371112-1371362 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 90, 113

Conread position: 230-481
Cow position: chr6:21399642-21399891 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 129

Conread position: 230-500
Cow position: chr6:67323423-67323163 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 93, 112

Conread position: 230-518
Cow position: chr6:17333939-17334229 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 121

Conread position: 230-518
Cow position: chr6:54936693-54936405 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 142, 113

Conread position: 230-535
Cow position: chr6:52412973-52412665 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 73

Conread position: 230-538
Cow position: chr6:20157447-20157132 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 90, 0

Conread position: 230-571
Cow position: chr6:130049-130393 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 54

Conread position: 230-579
Cow position: chr6:54600462-54600131 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 170

Conread position: 230-581
Cow position: chr6:20097845-20098203 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 248

Conread position: 230-583
Cow position: chr6:61113881-61113509 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 76

Conread position: 230-718
Cow position: chr6:1770084-1770570 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 114

Conread position: 231-495
Cow position: chr6:54036030-54036283 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 89, 73

Conread position: 231-496
Cow position: chr6:48988543-48988284 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 85

Conread position: 231-508
Cow position: chr6:12542817-12543095 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 231-510
Cow position: chr6:3595904-3595633 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 132

Conread position: 231-510
Cow position: chr6:60783983-60783706 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 184

Conread position: 231-544
Cow position: chr6:22502798-22503120 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 85

Conread position: 231-611
Cow position: chr6:35471397-35471795 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 26

Conread position: 231-690
Cow position: chr6:47305453-47304980 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 232-634
Cow position: chr6:54368792-54369188 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 118

Conread position: 232-712
Cow position: chr6:60673677-60673178 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 47

Conread position: 233-463
Cow position: chr6:20206386-20206156 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 41

Conread position: 235-690
Cow position: chr6:58074157-58073695 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 236-496
Cow position: chr6:6965290-6965534 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 99, 54

Conread position: 238-453
Cow position: chr6:16266830-16266609 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 238-548
Cow position: chr6:54430936-54430617 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 67

Conread position: 238-613
Cow position: chr6:48282098-48281724 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 122

Conread position: 239-716
Cow position: chr6:52248025-52248496 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 107

Conread position: 241-590
Cow position: chr6:20330111-20329773 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 96

Conread position: 242-747
Cow position: chr6:48170040-48169542 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 80

Conread position: 243-463
Cow position: chr6:4559204-4559423 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 130, 38

Conread position: 245-392
Cow position: chr6:21347194-21347343 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 96, 140

Conread position: 245-693
Cow position: chr6:67968511-67968982 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 159

Conread position: 246-407
Cow position: chr6:67615332-67615495 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 247-718
Cow position: chr6:62924899-62925376 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 83

Conread position: 252-712
Cow position: chr6:24962237-24961797 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 121

Conread position: 253-475
Cow position: chr6:12829134-12829354 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 84, 107

Conread position: 253-549
Cow position: chr6:58732220-58732517 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 20

Conread position: 257-469
Cow position: chr6:37376427-37376643 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 258-718
Cow position: chr6:18961431-18961896 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 263-548
Cow position: chr6:68049512-68049234 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 160, 83

Conread position: 273-718
Cow position: chr6:49410626-49411055 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 79

Conread position: 281-517
Cow position: chr6:47989235-47989014 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 220, 63

Conread position: 281-528
Cow position: chr6:9839235-9838980 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 194

Conread position: 281-538
Cow position: chr6:6460605-6460347 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 48

Conread position: 281-663
Cow position: chr6:5445686-5445327 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 59, 94

Conread position: 281-674
Cow position: chr6:28148898-28148512 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 92, 133

Conread position: 284-500
Cow position: chr6:40834408-40834626 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 89

Conread position: 284-540
Cow position: chr6:44984390-44984135 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 86, 178

Conread position: 284-553
Cow position: chr6:50271045-50271302 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 112, 40

Conread position: 284-718
Cow position: chr6:16411251-16410822 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 162

Conread position: 285-718
Cow position: chr6:3978606-3979037 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 5

Conread position: 286-542
Cow position: chr6:53731582-53731325 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 42, 182

Conread position: 298-548
Cow position: chr6:48425278-48425523 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 21

Conread position: 303-666
Cow position: chr6:3936593-3936223 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 142

Conread position: 304-718
Cow position: chr6:58076270-58075846 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 305-461
Cow position: chr6:54288111-54287954 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 24

Conread position: 306-514
Cow position: chr6:58363970-58364180 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 158

Conread position: 323-627
Cow position: chr6:69500347-69500045 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 326-690
Cow position: chr6:20230812-20231168 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 17

Conread position: 327-545
Cow position: chr6:33277060-33276840 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 174

Conread position: 330-548
Cow position: chr6:22969097-22968875 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 342-549
Cow position: chr6:53138919-53139132 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 31, 0

Conread position: 345-710
Cow position: chr6:2013018-2012654 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 120

Conread position: 357-718
Cow position: chr6:1783790-1784141 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 90

Conread position: 358-517
Cow position: chr6:18904355-18904514 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 88

Conread position: 372-545
Cow position: chr6:46245346-46245522 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 48, 97

Conread position: 378-623
Cow position: chr6:34235471-34235715 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 7

Show alignments to all cow chromosomes.