Cow genome map

Conread name: Thy1-THY010079D05

Conread position: 96-570
Cow position: chrX:4768974-4768509 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 331
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 96, 33

Conread position: 104-424
Cow position: chrX:20168800-20168464 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 46

Conread position: 110-645
Cow position: chrX:8925920-8925389 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 82

Conread position: 110-676
Cow position: chrX:31436708-31436133 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 240

Conread position: 113-426
Cow position: chrX:12095535-12095870 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 244

Conread position: 113-518
Cow position: chrX:3580181-3579759 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 34, 251

Conread position: 113-647
Cow position: chrX:5637941-5638486 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 110

Conread position: 113-699
Cow position: chrX:31250626-31250022 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 326

Conread position: 113-719
Cow position: chrX:34554960-34554345 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 227

Conread position: 114-314
Cow position: chrX:20583895-20583683 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 68, 32

Conread position: 114-336
Cow position: chrX:39290591-39290354 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 114-372
Cow position: chrX:4289669-4289398 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 31, 66

Conread position: 114-392
Cow position: chrX:20957475-20957186 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 226

Conread position: 114-407
Cow position: chrX:22115078-22115394 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 8, 246

Conread position: 115-299
Cow position: chrX:4942046-4942226 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 98

Conread position: 115-342
Cow position: chrX:27668728-27668969 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 32, 53

Conread position: 115-500
Cow position: chrX:4399352-4398959 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 115-548
Cow position: chrX:7722208-7721769 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 30

Conread position: 115-549
Cow position: chrX:20791605-20792034 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 291
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 12, 71

Conread position: 115-708
Cow position: chrX:45502369-45501769 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 31

Conread position: 115-710
Cow position: chrX:31489755-31489131 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 264

Conread position: 116-342
Cow position: chrX:17966557-17966329 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 30

Conread position: 116-371
Cow position: chrX:27306673-27306412 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 82

Conread position: 117-343
Cow position: chrX:16836062-16836298 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 162

Conread position: 117-395
Cow position: chrX:5134706-5134412 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 195

Conread position: 117-443
Cow position: chrX:33539383-33539052 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 39

Conread position: 117-526
Cow position: chrX:10251970-10252375 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 299
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 30, 169

Conread position: 117-561
Cow position: chrX:9201775-9201315 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 232

Conread position: 117-591
Cow position: chrX:27431692-27432180 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 29

Conread position: 117-708
Cow position: chrX:25035150-25035765 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 11

Conread position: 117-718
Cow position: chrX:20887417-20888033 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 33

Conread position: 117-718
Cow position: chrX:31729670-31729069 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 311

Conread position: 118-312
Cow position: chrX:5026482-5026275 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 118-333
Cow position: chrX:42480058-42479831 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 118-405
Cow position: chrX:19469283-19469575 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 214

Conread position: 118-447
Cow position: chrX:24332008-24331661 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 231

Conread position: 118-712
Cow position: chrX:13177253-13177846 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 32

Conread position: 118-714
Cow position: chrX:161631-161043 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 28

Conread position: 119-291
Cow position: chrX:24054891-24054717 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 107

Conread position: 119-312
Cow position: chrX:31744785-31744986 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 119-506
Cow position: chrX:35885502-35885903 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 267
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 255

Conread position: 119-690
Cow position: chrX:11072990-11073566 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 10

Conread position: 119-707
Cow position: chrX:33854996-33855618 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 26

Conread position: 119-718
Cow position: chrX:917169-917765 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 63

Conread position: 119-718
Cow position: chrX:34565515-34564911 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 151

Conread position: 120-318
Cow position: chrX:23089064-23088869 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 28

Conread position: 120-319
Cow position: chrX:29467553-29467766 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 120-422
Cow position: chrX:45649099-45648781 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 26, 277

Conread position: 120-425
Cow position: chrX:38560779-38560462 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 245

Conread position: 120-449
Cow position: chrX:4403547-4403195 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 234

Conread position: 120-460
Cow position: chrX:43115378-43115021 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 174

Conread position: 120-471
Cow position: chrX:11614904-11614558 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 253
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 69, 30

Conread position: 120-478
Cow position: chrX:5118269-5118651 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 270

Conread position: 120-492
Cow position: chrX:45977153-45976755 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 38

Conread position: 120-512
Cow position: chrX:48043994-48044379 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 263
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 27, 61

Conread position: 120-535
Cow position: chrX:36356333-36355921 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 291
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 132

Conread position: 120-545
Cow position: chrX:10959187-10959615 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 101

Conread position: 120-545
Cow position: chrX:12979606-12980043 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 268

Conread position: 120-545
Cow position: chrX:27175229-27174782 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 316
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 26, 179

Conread position: 120-548
Cow position: chrX:1503536-1503124 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 102

Conread position: 120-548
Cow position: chrX:17662392-17662812 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 100

Conread position: 120-548
Cow position: chrX:29121250-29120843 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 69

Conread position: 120-583
Cow position: chrX:24365593-24366083 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 355

Conread position: 120-588
Cow position: chrX:17542170-17541705 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 106

Conread position: 120-591
Cow position: chrX:46072601-46073075 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 71

Conread position: 120-613
Cow position: chrX:30133095-30133608 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 351

Conread position: 120-710
Cow position: chrX:38094297-38094906 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 168

Conread position: 120-712
Cow position: chrX:45429802-45430402 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 13

Conread position: 120-714
Cow position: chrX:6414261-6413661 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 144

Conread position: 120-715
Cow position: chrX:9251934-9252558 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 244

Conread position: 120-718
Cow position: chrX:11656307-11655688 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 217

Conread position: 120-718
Cow position: chrX:12290947-12290348 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 218

Conread position: 120-718
Cow position: chrX:14883728-14884351 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 547

Conread position: 120-718
Cow position: chrX:34377168-34376565 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 211

Conread position: 120-718
Cow position: chrX:37072615-37072017 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 221

Conread position: 120-749
Cow position: chrX:12437054-12437656 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 130

Conread position: 121-274
Cow position: chrX:27666077-27666220 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 63

Conread position: 121-365
Cow position: chrX:28940472-28940212 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 213

Conread position: 121-369
Cow position: chrX:2523472-2523716 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 62

Conread position: 121-369
Cow position: chrX:11325881-11326138 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 8

Conread position: 121-372
Cow position: chrX:16984863-16984586 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 121-383
Cow position: chrX:35986043-35985765 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 29

Conread position: 121-407
Cow position: chrX:4152816-4153112 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 70

Conread position: 121-462
Cow position: chrX:5919715-5919364 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 25

Conread position: 121-474
Cow position: chrX:34314249-34313889 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 188

Conread position: 121-478
Cow position: chrX:34504825-34505196 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 279

Conread position: 121-481
Cow position: chrX:20584540-20584171 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 75

Conread position: 121-499
Cow position: chrX:32431827-32431461 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 259
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 30

Conread position: 121-500
Cow position: chrX:34792095-34792477 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 29

Conread position: 121-706
Cow position: chrX:8869176-8869762 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 314

Conread position: 121-712
Cow position: chrX:42087054-42086479 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 121-718
Cow position: chrX:27446911-27446302 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 216

Conread position: 121-718
Cow position: chrX:34532739-34532142 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 453
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 24

Conread position: 121-721
Cow position: chrX:38964325-38963721 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 317

Conread position: 122-307
Cow position: chrX:32867097-32866899 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 122-543
Cow position: chrX:39558156-39558557 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 34

Conread position: 122-548
Cow position: chrX:37575043-37574641 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 96

Conread position: 122-569
Cow position: chrX:11938726-11939164 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 84

Conread position: 122-730
Cow position: chrX:2301131-2300522 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 101

Conread position: 123-421
Cow position: chrX:29050468-29050156 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 39

Conread position: 123-426
Cow position: chrX:34836846-34837150 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 203

Conread position: 123-463
Cow position: chrX:41871283-41870938 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 269

Conread position: 123-548
Cow position: chrX:11633881-11633463 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 19

Conread position: 125-660
Cow position: chrX:7646460-7645926 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 101

Conread position: 126-335
Cow position: chrX:4467174-4466963 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 65

Conread position: 126-336
Cow position: chrX:38722320-38722116 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 59

Conread position: 126-379
Cow position: chrX:22392765-22393035 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 126-402
Cow position: chrX:1087925-1088208 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 21, 158

Conread position: 126-429
Cow position: chrX:10516477-10516157 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 253

Conread position: 126-444
Cow position: chrX:42927607-42927933 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 126-446
Cow position: chrX:26881339-26881684 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 42

Conread position: 126-480
Cow position: chrX:21986078-21986443 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 172

Conread position: 126-481
Cow position: chrX:39415167-39415517 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 256
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 24, 96

Conread position: 126-501
Cow position: chrX:27145822-27145456 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 208

Conread position: 126-530
Cow position: chrX:33001121-33000706 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 84

Conread position: 126-534
Cow position: chrX:1499877-1499468 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 65

Conread position: 126-544
Cow position: chrX:29542005-29542430 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 356

Conread position: 126-548
Cow position: chrX:11856625-11856214 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 58

Conread position: 126-548
Cow position: chrX:22075018-22074585 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 41

Conread position: 126-548
Cow position: chrX:42011484-42011065 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 92

Conread position: 126-565
Cow position: chrX:30420744-30421175 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 308
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 65

Conread position: 126-568
Cow position: chrX:38642465-38642021 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 36

Conread position: 126-581
Cow position: chrX:23497474-23497915 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 162

Conread position: 126-627
Cow position: chrX:1175767-1176272 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 52

Conread position: 126-715
Cow position: chrX:30543085-30543674 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 126-718
Cow position: chrX:35224499-35223913 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 65

Conread position: 126-718
Cow position: chrX:35269079-35268504 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 165

Conread position: 127-422
Cow position: chrX:1466385-1466069 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 128-715
Cow position: chrX:17964325-17964903 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 79

Conread position: 128-719
Cow position: chrX:4043662-4044248 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 129-416
Cow position: chrX:20881741-20882023 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 196
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 86

Conread position: 129-456
Cow position: chrX:40692552-40692877 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 214
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 110

Conread position: 129-462
Cow position: chrX:40685109-40685463 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 130-712
Cow position: chrX:9650808-9651429 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 472

Conread position: 132-371
Cow position: chrX:47061603-47061354 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 12, 184

Conread position: 132-718
Cow position: chrX:14973540-14974124 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 151

Conread position: 133-412
Cow position: chrX:41192905-41192626 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 43

Conread position: 133-533
Cow position: chrX:43779649-43780053 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 77

Conread position: 133-718
Cow position: chrX:1615842-1616446 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 71

Conread position: 135-548
Cow position: chrX:37119789-37119384 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 49

Conread position: 137-379
Cow position: chrX:19943039-19943286 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 24

Conread position: 138-710
Cow position: chrX:5017240-5017787 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 18

Conread position: 138-745
Cow position: chrX:37489900-37489304 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 26

Conread position: 148-499
Cow position: chrX:14275549-14275901 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 238

Conread position: 151-386
Cow position: chrX:32977914-32978133 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 29

Conread position: 151-583
Cow position: chrX:28878004-28878416 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 222, 27

Conread position: 152-609
Cow position: chrX:8731263-8730799 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 152-718
Cow position: chrX:34238892-34238331 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 153-369
Cow position: chrX:6599615-6599822 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 181, 11

Conread position: 153-424
Cow position: chrX:47345498-47345240 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 13, 27

Conread position: 153-511
Cow position: chrX:31252576-31252239 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 153-548
Cow position: chrX:17231905-17231519 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 268
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 12, 26

Conread position: 153-548
Cow position: chrX:42380942-42381315 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 30

Conread position: 153-611
Cow position: chrX:31294401-31294822 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 321
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 12, 63

Conread position: 153-663
Cow position: chrX:38006603-38007102 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 12

Conread position: 153-710
Cow position: chrX:27705755-27705212 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 20

Conread position: 153-718
Cow position: chrX:20339725-20340278 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 26

Conread position: 153-718
Cow position: chrX:42247013-42247564 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 11

Conread position: 153-718
Cow position: chrX:46532322-46532909 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 68

Conread position: 154-474
Cow position: chrX:29723918-29723597 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 10

Conread position: 156-517
Cow position: chrX:36068185-36067835 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 157-702
Cow position: chrX:34503085-34502550 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 7

Conread position: 158-371
Cow position: chrX:24749252-24749047 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 55

Conread position: 164-473
Cow position: chrX:7710381-7710685 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 209, 12

Conread position: 164-548
Cow position: chrX:35543046-35542676 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 52

Conread position: 164-712
Cow position: chrX:17795142-17794612 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 54

Conread position: 164-718
Cow position: chrX:38218875-38218329 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 7

Conread position: 165-627
Cow position: chrX:35273527-35273046 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 43

Conread position: 166-463
Cow position: chrX:48014592-48014308 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 174, 50

Conread position: 175-497
Cow position: chrX:41068873-41068564 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 153, 38

Conread position: 175-718
Cow position: chrX:7695896-7695375 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 24

Conread position: 177-530
Cow position: chrX:37780963-37781315 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 37

Conread position: 178-421
Cow position: chrX:23113430-23113186 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 143, 38

Conread position: 178-432
Cow position: chrX:16348427-16348672 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 150, 23

Conread position: 178-458
Cow position: chrX:34315666-34315396 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 38

Conread position: 178-573
Cow position: chrX:45174996-45174600 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 30

Conread position: 178-647
Cow position: chrX:33640120-33639650 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 39

Conread position: 178-672
Cow position: chrX:31442684-31443163 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 38

Conread position: 178-712
Cow position: chrX:28865861-28866370 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 39

Conread position: 178-721
Cow position: chrX:3654753-3654217 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 24

Conread position: 179-500
Cow position: chrX:22387106-22387414 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 37

Conread position: 179-515
Cow position: chrX:32821172-32820847 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 39

Conread position: 180-371
Cow position: chrX:40531900-40532084 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 155, 38

Conread position: 180-388
Cow position: chrX:22914899-22915094 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 193, 37

Conread position: 180-412
Cow position: chrX:5135377-5135607 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 152, 15

Conread position: 180-416
Cow position: chrX:40680757-40680525 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 142, 36

Conread position: 180-436
Cow position: chrX:169403-169646 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 243, 37

Conread position: 180-442
Cow position: chrX:23562775-23562523 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 180-464
Cow position: chrX:27228270-27227989 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 193, 22

Conread position: 180-492
Cow position: chrX:42855601-42855290 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 36

Conread position: 180-518
Cow position: chrX:31312172-31311840 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 36

Conread position: 180-533
Cow position: chrX:4515834-4515467 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 37

Conread position: 180-538
Cow position: chrX:46587965-46587612 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 25

Conread position: 180-541
Cow position: chrX:6278355-6278714 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 36

Conread position: 180-541
Cow position: chrX:34411989-34411631 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 36

Conread position: 180-541
Cow position: chrX:34543927-34543579 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 38

Conread position: 180-542
Cow position: chrX:29601685-29602040 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 36

Conread position: 180-545
Cow position: chrX:38549590-38549236 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 37

Conread position: 180-547
Cow position: chrX:17888280-17888620 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 145, 37

Conread position: 180-548
Cow position: chrX:9416541-9416908 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 180-548
Cow position: chrX:15815234-15814882 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 144, 53

Conread position: 180-548
Cow position: chrX:23092016-23091666 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 180-567
Cow position: chrX:40035297-40035687 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 37

Conread position: 180-568
Cow position: chrX:27393883-27394253 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 36

Conread position: 180-643
Cow position: chrX:41238212-41238674 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 36

Conread position: 180-671
Cow position: chrX:40557536-40558018 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 37

Conread position: 180-703
Cow position: chrX:11717640-11718152 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 36

Conread position: 180-712
Cow position: chrX:878237-878753 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 36

Conread position: 180-712
Cow position: chrX:13647642-13648167 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 36

Conread position: 180-718
Cow position: chrX:5872460-5871924 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 38

Conread position: 180-718
Cow position: chrX:34402149-34401609 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 36

Conread position: 180-721
Cow position: chrX:8797392-8796859 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 37

Conread position: 180-722
Cow position: chrX:7718975-7718459 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 21

Conread position: 180-760
Cow position: chrX:41878791-41879362 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 36

Conread position: 181-719
Cow position: chrX:14599674-14599146 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 23

Conread position: 182-370
Cow position: chrX:29553426-29553246 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 165, 34

Conread position: 182-548
Cow position: chrX:13382466-13382109 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 35

Conread position: 182-717
Cow position: chrX:43730083-43730578 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 34

Conread position: 183-390
Cow position: chrX:46429679-46429881 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 155, 35

Conread position: 183-441
Cow position: chrX:43568064-43567811 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 190, 25

Conread position: 183-446
Cow position: chrX:46291284-46291023 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 21

Conread position: 183-463
Cow position: chrX:37986365-37986100 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 158, 34

Conread position: 183-465
Cow position: chrX:9365536-9365811 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 195
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 190, 33

Conread position: 185-548
Cow position: chrX:6690122-6690463 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 188, 31

Conread position: 186-685
Cow position: chrX:10411847-10412344 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 26

Conread position: 188-599
Cow position: chrX:17726123-17725708 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 271

Conread position: 189-429
Cow position: chrX:31515308-31515070 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 82, 27

Conread position: 190-383
Cow position: chrX:25328472-25328659 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 110

Conread position: 190-712
Cow position: chrX:7278044-7277547 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 26

Conread position: 191-518
Cow position: chrX:42235381-42235719 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 11, 261

Conread position: 191-719
Cow position: chrX:10831344-10831902 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 191-745
Cow position: chrX:37232539-37231995 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 24

Conread position: 208-510
Cow position: chrX:47186202-47186498 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 192, 19

Conread position: 210-411
Cow position: chrX:18272935-18273139 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 14, 55

Conread position: 210-461
Cow position: chrX:19273584-19273854 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 210-469
Cow position: chrX:616136-616401 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 213-673
Cow position: chrX:47481916-47481456 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 65

Conread position: 218-677
Cow position: chrX:47967722-47967252 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 239

Conread position: 220-718
Cow position: chrX:12309273-12309775 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 139

Conread position: 221-500
Cow position: chrX:46433603-46433316 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 198
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 5, 120

Conread position: 221-518
Cow position: chrX:47302765-47303065 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 5, 127

Conread position: 221-530
Cow position: chrX:47300791-47301101 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 127

Conread position: 221-586
Cow position: chrX:48652609-48652988 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 252
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 5, 119

Conread position: 221-627
Cow position: chrX:44834684-44835114 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 285
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 152

Conread position: 221-702
Cow position: chrX:20697497-20697977 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 110

Conread position: 223-443
Cow position: chrX:29230107-29229896 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 172
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 150, 77

Conread position: 223-541
Cow position: chrX:38853305-38852988 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 44

Conread position: 223-545
Cow position: chrX:1514311-1514613 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 150, 42

Conread position: 223-548
Cow position: chrX:9041136-9041444 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 41, 36

Conread position: 223-679
Cow position: chrX:46770854-46771322 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 107

Conread position: 223-718
Cow position: chrX:42469833-42470326 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 153

Conread position: 224-410
Cow position: chrX:39220186-39220000 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 118

Conread position: 224-471
Cow position: chrX:21566514-21566261 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 102, 92

Conread position: 224-481
Cow position: chrX:29680154-29680407 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 149, 112

Conread position: 224-518
Cow position: chrX:23785753-23785468 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 199, 21

Conread position: 224-542
Cow position: chrX:21004791-21004474 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 222
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 227

Conread position: 224-545
Cow position: chrX:37910552-37910240 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 101, 143

Conread position: 224-548
Cow position: chrX:23513910-23514233 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 56

Conread position: 224-567
Cow position: chrX:42492416-42492748 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 98

Conread position: 224-686
Cow position: chrX:19690322-19689858 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 108

Conread position: 224-712
Cow position: chrX:45968255-45967778 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 91

Conread position: 224-718
Cow position: chrX:11082515-11083003 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 125

Conread position: 224-718
Cow position: chrX:26625564-26626078 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 167

Conread position: 225-718
Cow position: chrX:18694825-18695315 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 40

Conread position: 226-357
Cow position: chrX:4615905-4616035 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 112

Conread position: 226-396
Cow position: chrX:12082219-12082391 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 47

Conread position: 226-548
Cow position: chrX:41884307-41884633 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 0

Conread position: 226-570
Cow position: chrX:27680503-27680162 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 163

Conread position: 226-718
Cow position: chrX:7572010-7571514 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 196

Conread position: 227-369
Cow position: chrX:29585223-29585082 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 227-549
Cow position: chrX:22822150-22821831 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 145, 95

Conread position: 227-583
Cow position: chrX:25815797-25816150 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 94, 155

Conread position: 227-703
Cow position: chrX:11844137-11844612 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 164

Conread position: 227-721
Cow position: chrX:1055277-1055785 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 185

Conread position: 227-761
Cow position: chrX:13868806-13868270 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 77

Conread position: 229-696
Cow position: chrX:47344398-47343925 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 172

Conread position: 229-719
Cow position: chrX:22813164-22812672 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 61

Conread position: 230-417
Cow position: chrX:11317867-11318054 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 115

Conread position: 230-421
Cow position: chrX:4296724-4296910 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 141, 92

Conread position: 230-449
Cow position: chrX:45670323-45670109 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 99

Conread position: 230-454
Cow position: chrX:27945953-27946183 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 230-483
Cow position: chrX:18204362-18204615 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 96

Conread position: 230-509
Cow position: chrX:47165785-47166061 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 140, 94

Conread position: 230-518
Cow position: chrX:47484163-47484457 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 230-538
Cow position: chrX:48010705-48010389 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 90, 0

Conread position: 230-542
Cow position: chrX:45846202-45845886 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 64

Conread position: 230-545
Cow position: chrX:3130673-3130369 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 202
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 272, 99

Conread position: 230-548
Cow position: chrX:21642381-21642693 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 141, 90

Conread position: 230-548
Cow position: chrX:21672661-21672336 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 107

Conread position: 230-613
Cow position: chrX:22482590-22482973 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 37

Conread position: 230-613
Cow position: chrX:45414203-45414584 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 99

Conread position: 230-616
Cow position: chrX:46722633-46723028 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 114

Conread position: 230-647
Cow position: chrX:47873235-47873659 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 278
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 90, 116

Conread position: 230-655
Cow position: chrX:26493107-26492676 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 100

Conread position: 230-679
Cow position: chrX:45089547-45089086 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 294
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 143, 99

Conread position: 230-710
Cow position: chrX:24424300-24424773 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 91

Conread position: 230-718
Cow position: chrX:23414268-23414776 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 337
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 10

Conread position: 230-718
Cow position: chrX:23563690-23564186 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 108

Conread position: 230-718
Cow position: chrX:29289679-29289187 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 111

Conread position: 230-718
Cow position: chrX:40269593-40269087 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 230-718
Cow position: chrX:44054903-44054415 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 100

Conread position: 230-721
Cow position: chrX:31948834-31949322 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 158

Conread position: 231-449
Cow position: chrX:40320506-40320286 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 140, 116

Conread position: 231-463
Cow position: chrX:22453998-22454225 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 42

Conread position: 231-500
Cow position: chrX:8917494-8917226 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 142, 110

Conread position: 231-500
Cow position: chrX:22921421-22921147 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 257

Conread position: 231-511
Cow position: chrX:36061260-36060973 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 105, 0

Conread position: 231-552
Cow position: chrX:29544777-29545101 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 234
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 108

Conread position: 231-612
Cow position: chrX:2467984-2467597 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 74

Conread position: 231-718
Cow position: chrX:40826651-40827134 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 107

Conread position: 232-500
Cow position: chrX:4279019-4279281 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 190, 111

Conread position: 232-718
Cow position: chrX:23583660-23583169 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 42

Conread position: 233-718
Cow position: chrX:26440687-26441169 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 47

Conread position: 235-371
Cow position: chrX:44095356-44095218 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 238-441
Cow position: chrX:17949400-17949601 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 65

Conread position: 238-442
Cow position: chrX:27119790-27119587 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 104

Conread position: 238-465
Cow position: chrX:45875485-45875256 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 117

Conread position: 238-517
Cow position: chrX:40809786-40809502 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 57, 67

Conread position: 238-538
Cow position: chrX:842250-841953 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 214
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 104

Conread position: 238-595
Cow position: chrX:488597-488224 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 255
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 172

Conread position: 238-596
Cow position: chrX:45403732-45404101 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 67

Conread position: 238-718
Cow position: chrX:42171201-42171688 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 346

Conread position: 239-568
Cow position: chrX:34662754-34663078 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 225
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 213

Conread position: 241-481
Cow position: chrX:12405291-12405538 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 246-712
Cow position: chrX:42507563-42508026 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 76

Conread position: 248-541
Cow position: chrX:16416592-16416300 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 64

Conread position: 249-548
Cow position: chrX:618920-619223 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 252-456
Cow position: chrX:19003372-19003174 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 121, 21

Conread position: 257-718
Cow position: chrX:13785286-13785767 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 261-568
Cow position: chrX:26875811-26876120 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 206

Conread position: 276-684
Cow position: chrX:10306732-10306315 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 67

Conread position: 278-718
Cow position: chrX:35681395-35680955 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 192

Conread position: 280-718
Cow position: chrX:8900078-8899636 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 64

Conread position: 281-481
Cow position: chrX:32215250-32215045 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 95

Conread position: 281-596
Cow position: chrX:12018342-12018008 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 92, 216

Conread position: 281-628
Cow position: chrX:19015487-19015143 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 92

Conread position: 281-645
Cow position: chrX:28845883-28845528 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 65

Conread position: 281-718
Cow position: chrX:15139497-15139938 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 59

Conread position: 281-718
Cow position: chrX:42461694-42462137 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 164

Conread position: 283-718
Cow position: chrX:17498133-17497707 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 86

Conread position: 284-543
Cow position: chrX:36961688-36961427 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 89, 59

Conread position: 290-595
Cow position: chrX:40648027-40647712 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 39

Conread position: 291-718
Cow position: chrX:27516570-27516145 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 59

Conread position: 295-548
Cow position: chrX:29509404-29509659 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 47, 8

Conread position: 298-536
Cow position: chrX:17908255-17908487 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 75, 71

Conread position: 298-568
Cow position: chrX:30832819-30833077 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 21, 33

Conread position: 298-707
Cow position: chrX:41743947-41743535 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 164

Conread position: 298-712
Cow position: chrX:38439514-38439093 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 346

Conread position: 308-642
Cow position: chrX:14925024-14924687 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 159

Conread position: 309-718
Cow position: chrX:20583044-20582641 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 66

Conread position: 324-568
Cow position: chrX:42282436-42282197 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 87

Conread position: 325-548
Cow position: chrX:42338943-42339151 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 176, 19

Conread position: 327-718
Cow position: chrX:35609993-35609597 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 139

Conread position: 332-690
Cow position: chrX:11562156-11561781 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 263
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 26, 198

Conread position: 333-727
Cow position: chrX:12116044-12115642 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 155

Conread position: 335-554
Cow position: chrX:37541120-37540906 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 83, 129

Conread position: 338-518
Cow position: chrX:31256859-31256682 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 35, 113

Conread position: 342-749
Cow position: chrX:40452220-40452641 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 347-548
Cow position: chrX:2383473-2383274 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 121

Conread position: 351-568
Cow position: chrX:25411821-25411601 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 83

Conread position: 353-596
Cow position: chrX:16734539-16734290 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 176

Conread position: 359-523
Cow position: chrX:24149613-24149449 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 16, 115

Conread position: 359-609
Cow position: chrX:9997363-9997611 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 118

Conread position: 364-712
Cow position: chrX:48287482-48287814 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 13, 104

Conread position: 367-718
Cow position: chrX:4123802-4123447 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 72

Conread position: 371-544
Cow position: chrX:16324005-16324175 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 82

Conread position: 372-548
Cow position: chrX:2206592-2206759 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 64

Conread position: 372-718
Cow position: chrX:7806338-7805987 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Show alignments to all cow chromosomes.