Cow genome map
| Conread name: | Thy1-THY010085D12 |
| Conread position: | 325-505 |
| Cow position: | chr1:17292399-17292215 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 56, 20 |
| Conread position: | 328-576 |
| Cow position: | chr1:22481190-22480947 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 329-835 |
| Cow position: | chr1:32360925-32360427 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 16 |
| Conread position: | 329-835 |
| Cow position: | chr1:53520131-53520617 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 329-838 |
| Cow position: | chr1:20001532-20001043 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 14 |
| Conread position: | 329-838 |
| Cow position: | chr1:85142746-85142241 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 19 |
| Conread position: | 329-840 |
| Cow position: | chr1:92196445-92196940 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 16 |
| Conread position: | 329-842 |
| Cow position: | chr1:16973647-16973138 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 16 |
| Conread position: | 330-606 |
| Cow position: | chr1:36235282-36235003 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 330-671 |
| Cow position: | chr1:31317005-31316674 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 330-819 |
| Cow position: | chr1:58218564-58219052 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 330-821 |
| Cow position: | chr1:64972881-64973359 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 15 |
| Conread position: | 330-822 |
| Cow position: | chr1:27494710-27495190 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 330-835 |
| Cow position: | chr1:56644420-56643927 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 330-840 |
| Cow position: | chr1:56190949-56190448 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 330-840 |
| Cow position: | chr1:87830718-87831219 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 15 |
| Conread position: | 330-840 |
| Cow position: | chr1:95765909-95765416 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 330-841 |
| Cow position: | chr1:20078696-20078186 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 330-841 |
| Cow position: | chr1:41736405-41735907 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 330-841 |
| Cow position: | chr1:55203441-55202922 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 330-842 |
| Cow position: | chr1:4226466-4226954 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 330-842 |
| Cow position: | chr1:5162869-5162351 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 199, 18 |
| Conread position: | 330-842 |
| Cow position: | chr1:14528999-14528488 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 330-842 |
| Cow position: | chr1:18282441-18282956 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 330-842 |
| Cow position: | chr1:20378124-20377630 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 330-842 |
| Cow position: | chr1:57391137-57390638 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 17 |
| Conread position: | 330-842 |
| Cow position: | chr1:71135370-71135877 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 17 |
| Conread position: | 330-842 |
| Cow position: | chr1:72804049-72803541 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 331-822 |
| Cow position: | chr1:41093657-41093174 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 331-842 |
| Cow position: | chr1:85529952-85529448 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 332-842 |
| Cow position: | chr1:57645902-57646392 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 332-842 |
| Cow position: | chr1:81665035-81664524 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 343 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 334-492 |
| Cow position: | chr1:100435785-100435942 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 334-556 |
| Cow position: | chr1:37420789-37420564 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 334-598 |
| Cow position: | chr1:30440652-30440914 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 334-699 |
| Cow position: | chr1:57246571-57246941 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 271 |
| Conread position: | 334-741 |
| Cow position: | chr1:77461607-77462013 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 334-754 |
| Cow position: | chr1:66242587-66242172 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 334-822 |
| Cow position: | chr1:28251845-28252321 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 14 |
| Conread position: | 334-838 |
| Cow position: | chr1:98656494-98656008 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 334-839 |
| Cow position: | chr1:85338335-85338837 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 334-841 |
| Cow position: | chr1:33442722-33442228 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 11 |
| Conread position: | 334-842 |
| Cow position: | chr1:52054295-52054803 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 11 |
| Conread position: | 335-580 |
| Cow position: | chr1:24595063-24595313 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 174, 10 |
| Conread position: | 335-735 |
| Cow position: | chr1:44229689-44230101 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 198 |
| Conread position: | 335-754 |
| Cow position: | chr1:40088851-40089265 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 397, 10 |
| Conread position: | 335-827 |
| Cow position: | chr1:22227080-22227560 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 111 |
| Conread position: | 335-840 |
| Cow position: | chr1:102775687-102775197 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 334 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 335-842 |
| Cow position: | chr1:39701978-39702508 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 335-842 |
| Cow position: | chr1:63602313-63601816 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 336-730 |
| Cow position: | chr1:67013486-67013867 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 336-842 |
| Cow position: | chr1:29915645-29916130 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 337-732 |
| Cow position: | chr1:22789881-22790270 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 8 |
| Conread position: | 337-738 |
| Cow position: | chr1:20543705-20544105 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 8 |
| Conread position: | 337-749 |
| Cow position: | chr1:9783712-9784120 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 337-822 |
| Cow position: | chr1:81925705-81925243 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 8 |
| Conread position: | 338-489 |
| Cow position: | chr1:31391825-31391669 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 9 |
| Conread position: | 341-840 |
| Cow position: | chr1:34915113-34915587 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 27 |
| Conread position: | 341-840 |
| Cow position: | chr1:77657027-77657514 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 341-841 |
| Cow position: | chr1:87473239-87472734 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 49, 188 |
| Conread position: | 342-842 |
| Cow position: | chr1:56140913-56140421 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 191 |
| Conread position: | 343-730 |
| Cow position: | chr1:96298794-96298410 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 185 |
| Conread position: | 344-573 |
| Cow position: | chr1:21453423-21453194 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 14, 56 |
| Conread position: | 344-625 |
| Cow position: | chr1:65393735-65394017 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 258 |
| Conread position: | 344-698 |
| Cow position: | chr1:4452600-4452247 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 85 |
| Conread position: | 344-732 |
| Cow position: | chr1:5013315-5012927 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 186 |
| Conread position: | 344-802 |
| Cow position: | chr1:4619511-4619967 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 187 |
| Conread position: | 344-815 |
| Cow position: | chr1:31039584-31039144 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 319 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 56, 103 |
| Conread position: | 344-839 |
| Cow position: | chr1:61591544-61591068 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 64 |
| Conread position: | 344-840 |
| Cow position: | chr1:70064581-70065064 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 68 |
| Conread position: | 344-842 |
| Cow position: | chr1:31190873-31190392 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 183 |
| Conread position: | 344-842 |
| Cow position: | chr1:68602147-68601657 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 184 |
| Conread position: | 345-775 |
| Cow position: | chr1:94663137-94663569 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 185 |
| Conread position: | 345-840 |
| Cow position: | chr1:12057768-12057284 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 119 |
| Conread position: | 345-841 |
| Cow position: | chr1:54933412-54933905 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 185 |
| Conread position: | 345-842 |
| Cow position: | chr1:53309181-53308680 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 189 |
| Conread position: | 347-486 |
| Cow position: | chr1:42740182-42740325 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 347-561 |
| Cow position: | chr1:19441054-19440842 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 347-644 |
| Cow position: | chr1:37660967-37661265 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 175 |
| Conread position: | 347-706 |
| Cow position: | chr1:88028307-88028660 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 43 |
| Conread position: | 347-741 |
| Cow position: | chr1:68846232-68845833 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 63 |
| Conread position: | 347-755 |
| Cow position: | chr1:89185978-89185558 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 179 |
| Conread position: | 347-821 |
| Cow position: | chr1:78291043-78291508 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 347-836 |
| Cow position: | chr1:22012477-22011996 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 186 |
| Conread position: | 347-838 |
| Cow position: | chr1:26811588-26811091 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 347-839 |
| Cow position: | chr1:40603515-40603995 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 83 |
| Conread position: | 347-839 |
| Cow position: | chr1:80901991-80901517 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 347-839 |
| Cow position: | chr1:99837865-99837377 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 187 |
| Conread position: | 347-840 |
| Cow position: | chr1:16116913-16116428 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 347-840 |
| Cow position: | chr1:88337929-88338407 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 68 |
| Conread position: | 347-841 |
| Cow position: | chr1:53250320-53249849 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 347-841 |
| Cow position: | chr1:76873364-76873851 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 347-841 |
| Cow position: | chr1:89492751-89492269 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 347-842 |
| Cow position: | chr1:30372380-30372864 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 117 |
| Conread position: | 348-746 |
| Cow position: | chr1:95223405-95223021 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 41 |
| Conread position: | 348-836 |
| Cow position: | chr1:36528653-36529137 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 181 |
| Conread position: | 348-841 |
| Cow position: | chr1:3969799-3969314 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 348-841 |
| Cow position: | chr1:39235016-39234534 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 0 |
| Conread position: | 348-841 |
| Cow position: | chr1:76878518-76879003 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 134 |
| Conread position: | 348-842 |
| Cow position: | chr1:72285078-72284587 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 346 |
| Conread position: | 348-842 |
| Cow position: | chr1:73756348-73756805 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 30 |
| Conread position: | 349-698 |
| Cow position: | chr1:40964679-40964327 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 181 |
| Conread position: | 349-822 |
| Cow position: | chr1:85866308-85866768 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 349-842 |
| Cow position: | chr1:1744072-1743583 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 39 |
| Conread position: | 350-836 |
| Cow position: | chr1:67127384-67126927 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 308 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 126, 89 |
| Conread position: | 354-840 |
| Cow position: | chr1:98789345-98789825 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 355-842 |
| Cow position: | chr1:53494697-53495174 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 172 |
| Conread position: | 357-842 |
| Cow position: | chr1:102313770-102313293 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 82 |
| Conread position: | 358-838 |
| Cow position: | chr1:23932359-23931884 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 358-841 |
| Cow position: | chr1:96963576-96964030 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 29, 100 |
| Conread position: | 358-842 |
| Cow position: | chr1:67009489-67009017 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 361-842 |
| Cow position: | chr1:44769855-44769397 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 105 |
| Conread position: | 371-842 |
| Cow position: | chr1:97622959-97622490 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 159 |
| Conread position: | 371-842 |
| Cow position: | chr1:99210279-99209811 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 372-606 |
| Cow position: | chr1:97482387-97482155 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 187, 154 |
| Conread position: | 372-817 |
| Cow position: | chr1:48731549-48731143 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 9 |
| Conread position: | 373-839 |
| Cow position: | chr1:73443357-73442911 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 374-838 |
| Cow position: | chr1:33537613-33538049 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 374-842 |
| Cow position: | chr1:23973293-23973736 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 309 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 374-842 |
| Cow position: | chr1:52863778-52863307 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 374-842 |
| Cow position: | chr1:54163583-54163124 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 24 |
| Conread position: | 380-824 |
| Cow position: | chr1:14650432-14650005 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 381-788 |
| Cow position: | chr1:57120307-57119908 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 69 |
| Conread position: | 381-842 |
| Cow position: | chr1:31414699-31414253 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 381-842 |
| Cow position: | chr1:39479958-39479504 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 152 |
| Conread position: | 381-842 |
| Cow position: | chr1:96193625-96193182 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 23 |
| Conread position: | 385-842 |
| Cow position: | chr1:12871748-12871309 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 21 |
| Conread position: | 385-842 |
| Cow position: | chr1:79279286-79278838 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 389-833 |
| Cow position: | chr1:14561681-14561248 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 133 |
| Conread position: | 394-840 |
| Cow position: | chr1:40532040-40531605 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 129 |
| Conread position: | 395-841 |
| Cow position: | chr1:83576603-83576159 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 35 |
| Conread position: | 396-838 |
| Cow position: | chr1:21430781-21430332 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 140 |
| Conread position: | 398-842 |
| Cow position: | chr1:33987265-33986831 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 398-842 |
| Cow position: | chr1:85361140-85361567 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 127 |
| Conread position: | 398-842 |
| Cow position: | chr1:92962685-92963102 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 399-842 |
| Cow position: | chr1:66776224-66776654 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 411-839 |
| Cow position: | chr1:42176496-42176090 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 419-839 |
| Cow position: | chr1:16821718-16822132 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 159, 22 |
| Conread position: | 419-842 |
| Cow position: | chr1:15027981-15028388 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 95 |
| Conread position: | 422-842 |
| Cow position: | chr1:98612509-98612921 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 81 |
| Conread position: | 426-841 |
| Cow position: | chr1:53208403-53207984 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 429-838 |
| Cow position: | chr1:42506062-42505663 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 432-841 |
| Cow position: | chr1:52037118-52036733 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 97 |
| Conread position: | 434-841 |
| Cow position: | chr1:75444108-75443714 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 384, 93 |
| Conread position: | 434-842 |
| Cow position: | chr1:44522450-44522047 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 438-839 |
| Cow position: | chr1:59167127-59166747 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 271 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 441-842 |
| Cow position: | chr1:4031959-4032362 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 445-842 |
| Cow position: | chr1:57969744-57969359 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 447-842 |
| Cow position: | chr1:84786493-84786114 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 448-842 |
| Cow position: | chr1:42317037-42316650 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 80 |
| Conread position: | 455-842 |
| Cow position: | chr1:4218768-4218393 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 457-824 |
| Cow position: | chr1:69942088-69941727 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 70 |
| Conread position: | 461-842 |
| Cow position: | chr1:82407215-82406844 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 66 |
| Conread position: | 462-842 |
| Cow position: | chr1:73197251-73196876 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 28 |
| Conread position: | 468-823 |
| Cow position: | chr1:77119197-77118865 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 477-817 |
| Cow position: | chr1:67299152-67299482 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 121, 50 |
| Conread position: | 477-842 |
| Cow position: | chr1:95050788-95050430 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 483-841 |
| Cow position: | chr1:31498986-31499338 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 485-842 |
| Cow position: | chr1:69289788-69290142 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 44 |
| Conread position: | 486-834 |
| Cow position: | chr1:89405013-89405361 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 486-842 |
| Cow position: | chr1:21786687-21787035 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 41 |
| Conread position: | 486-842 |
| Cow position: | chr1:44975111-44975460 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 486-842 |
| Cow position: | chr1:71939156-71938793 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 263 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 487-842 |
| Cow position: | chr1:71676518-71676185 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 488-839 |
| Cow position: | chr1:59201955-59201616 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 240 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 489-841 |
| Cow position: | chr1:6795580-6795221 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 38 |
| Conread position: | 490-841 |
| Cow position: | chr1:99690529-99690869 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 498-842 |
| Cow position: | chr1:75966794-75967127 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 30 |
| Conread position: | 498-842 |
| Cow position: | chr1:82378170-82378508 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 504-791 |
| Cow position: | chr1:34397415-34397133 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 504-842 |
| Cow position: | chr1:52753789-52753454 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 23 |
| Conread position: | 509-835 |
| Cow position: | chr1:43353258-43352944 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 509-840 |
| Cow position: | chr1:71819114-71818791 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 510-842 |
| Cow position: | chr1:43893314-43893640 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 17 |
| Conread position: | 516-840 |
| Cow position: | chr1:475537-475849 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 519-842 |
| Cow position: | chr1:79590499-79590812 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 10 |
| Conread position: | 521-838 |
| Cow position: | chr1:102816633-102816937 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 525-841 |
| Cow position: | chr1:32629798-32630107 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 527-842 |
| Cow position: | chr1:82338404-82338099 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 530-841 |
| Cow position: | chr1:55429569-55429272 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 530-842 |
| Cow position: | chr1:40689120-40689418 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 534-842 |
| Cow position: | chr1:70534545-70534249 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 16 |
| Conread position: | 537-842 |
| Cow position: | chr1:93111237-93110941 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 538-842 |
| Cow position: | chr1:82389945-82389646 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 539-842 |
| Cow position: | chr1:19145510-19145218 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 541-841 |
| Cow position: | chr1:80714207-80713913 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 541-842 |
| Cow position: | chr1:55586182-55585892 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 215 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 142, 195 |
| Conread position: | 541-842 |
| Cow position: | chr1:96184583-96184296 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 545-840 |
| Cow position: | chr1:77131893-77132177 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 547-822 |
| Cow position: | chr1:10881213-10881471 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 549-838 |
| Cow position: | chr1:37310084-37309802 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 555-841 |
| Cow position: | chr1:39069535-39069247 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 134, 185 |
| Conread position: | 558-838 |
| Cow position: | chr1:68818374-68818101 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 13, 106 |
| Conread position: | 559-791 |
| Cow position: | chr1:22480803-22480577 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 0 |
| Conread position: | 563-842 |
| Cow position: | chr1:51376498-51376220 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 150, 42 |
| Conread position: | 576-838 |
| Cow position: | chr1:38382423-38382169 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 159 |
| Conread position: | 588-839 |
| Cow position: | chr1:34363394-34363633 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 588-842 |
| Cow position: | chr1:46940161-46940405 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 588-842 |
| Cow position: | chr1:50344697-50344955 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 32, 45 |
| Conread position: | 588-842 |
| Cow position: | chr1:90392235-90391984 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 139 |
| Conread position: | 588-842 |
| Cow position: | chr1:97276879-97276629 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 28, 148 |
| Conread position: | 589-822 |
| Cow position: | chr1:79465229-79465457 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 127 |
| Conread position: | 589-839 |
| Cow position: | chr1:7201979-7202223 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 100, 145 |
| Conread position: | 590-841 |
| Cow position: | chr1:81373975-81373729 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 592-842 |
| Cow position: | chr1:17292182-17291929 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 152, 8 |
| Conread position: | 593-841 |
| Cow position: | chr1:60554400-60554158 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 596-842 |
| Cow position: | chr1:97422825-97422585 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 600-822 |
| Cow position: | chr1:84240387-84240602 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 604-842 |
| Cow position: | chr1:2170040-2169808 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 154 |
| Conread position: | 605-842 |
| Cow position: | chr1:71045216-71045463 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 606-822 |
| Cow position: | chr1:78041038-78040828 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 608-838 |
| Cow position: | chr1:26498252-26498478 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 88 |
| Conread position: | 611-822 |
| Cow position: | chr1:1825281-1825485 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 613-840 |
| Cow position: | chr1:78184201-78184417 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 613-842 |
| Cow position: | chr1:40497070-40497285 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 614-791 |
| Cow position: | chr1:83747461-83747630 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 615-838 |
| Cow position: | chr1:57076795-57077016 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 615-839 |
| Cow position: | chr1:65144981-65144763 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 615-842 |
| Cow position: | chr1:12419969-12419747 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 74, 104 |
| Conread position: | 616-840 |
| Cow position: | chr1:61341677-61341448 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 618-792 |
| Cow position: | chr1:13578830-13578662 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 132 |
| Conread position: | 618-839 |
| Cow position: | chr1:95018018-95017802 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 26 |
| Conread position: | 621-842 |
| Cow position: | chr1:55019983-55020199 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 62, 112 |
| Conread position: | 622-794 |
| Cow position: | chr1:100771463-100771295 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 156, 111 |
| Conread position: | 627-836 |
| Cow position: | chr1:57982077-57981872 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 62 |
| Conread position: | 631-838 |
| Cow position: | chr1:10064549-10064347 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 164 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 632-841 |
| Cow position: | chr1:57541979-57541788 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 632-842 |
| Cow position: | chr1:76095730-76095936 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 636-836 |
| Cow position: | chr1:72790651-72790848 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 48, 113 |
| Conread position: | 643-842 |
| Cow position: | chr1:4441576-4441390 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 644-842 |
| Cow position: | chr1:65074164-65073970 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 647-839 |
| Cow position: | chr1:56225001-56225187 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 647-840 |
| Cow position: | chr1:98493958-98494140 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 647-842 |
| Cow position: | chr1:11020379-11020567 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 647-842 |
| Cow position: | chr1:60968231-60968429 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 90, 181 |
| Conread position: | 650-841 |
| Cow position: | chr1:10519286-10519466 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 24, 17 |
| Conread position: | 651-842 |
| Cow position: | chr1:89729518-89729331 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 660-842 |
| Cow position: | chr1:4384844-4385018 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 667-838 |
| Cow position: | chr1:53704119-53703956 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 672-813 |
| Cow position: | chr1:69002334-69002470 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 672-841 |
| Cow position: | chr1:66356162-66355998 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 682-842 |
| Cow position: | chr1:25183676-25183835 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 689-842 |
| Cow position: | chr1:71302699-71302855 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 691-841 |
| Cow position: | chr1:28678080-28678224 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 692-842 |
| Cow position: | chr1:4451969-4451824 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 707-842 |
| Cow position: | chr1:85782887-85783023 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.