Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 324-702
Cow position:
Alignm length: 382
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 21

Conread position: 329-777
Cow position:
Alignm length: 461
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 329-837
Cow position:
Alignm length: 515
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 49

Conread position: 329-842
Cow position:
Alignm length: 523
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 16

Conread position: 329-842
Cow position:
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 5

Conread position: 330-481
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 15

Conread position: 330-698
Cow position:
Alignm length: 373
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 330-732
Cow position:
Alignm length: 410
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 17

Conread position: 330-766
Cow position:
Alignm length: 438
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 330-786
Cow position:
Alignm length: 464
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 79

Conread position: 330-832
Cow position:
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 212

Conread position: 331-842
Cow position:
Alignm length: 513
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 427, 17

Conread position: 334-616
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 11

Conread position: 334-842
Cow position:
Alignm length: 513
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 13

Conread position: 336-559
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 45, 9

Conread position: 339-842
Cow position:
Alignm length: 514
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 344-842
Cow position:
Alignm length: 499
Alignm identity: 317
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 344-842
Cow position:
Alignm length: 522
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 102

Conread position: 345-460
Cow position:
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 345-838
Cow position:
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 0

Conread position: 347-511
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 347-755
Cow position:
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 116

Conread position: 347-829
Cow position:
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 178

Conread position: 347-838
Cow position:
Alignm length: 498
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 181

Conread position: 347-842
Cow position:
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 421, 42

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 182

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 106

Conread position: 348-838
Cow position:
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-841
Cow position:
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 180

Conread position: 348-841
Cow position:
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 185

Conread position: 348-842
Cow position:
Alignm length: 508
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 126

Conread position: 350-839
Cow position:
Alignm length: 499
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 84

Conread position: 350-842
Cow position:
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 369-838
Cow position:
Alignm length: 473
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 148

Conread position: 375-840
Cow position:
Alignm length: 467
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 152

Conread position: 385-842
Cow position:
Alignm length: 469
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 21

Conread position: 397-839
Cow position:
Alignm length: 446
Alignm identity: 303
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 150, 82

Conread position: 400-838
Cow position:
Alignm length: 439
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 409-842
Cow position:
Alignm length: 445
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 19

Conread position: 411-842
Cow position:
Alignm length: 432
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 416-841
Cow position:
Alignm length: 426
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 446-842
Cow position:
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 462-838
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 62

Conread position: 463-840
Cow position:
Alignm length: 379
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 57

Conread position: 468-842
Cow position:
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 59

Conread position: 478-841
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 481-833
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 484-834
Cow position:
Alignm length: 351
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 522-839
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 161, 44

Conread position: 540-839
Cow position:
Alignm length: 301
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 71

Conread position: 541-802
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 541-842
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 195

Conread position: 551-839
Cow position:
Alignm length: 292
Alignm identity: 193
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 21

Conread position: 554-836
Cow position:
Alignm length: 295
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 129, 201

Conread position: 578-839
Cow position:
Alignm length: 265
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 159

Conread position: 585-839
Cow position:
Alignm length: 256
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 123, 118

Conread position: 587-842
Cow position:
Alignm length: 256
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 588-837
Cow position:
Alignm length: 250
Alignm identity: 174
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 588-841
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 95, 145

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 180, 0

Conread position: 590-842
Cow position:
Alignm length: 254
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 160

Conread position: 593-842
Cow position:
Alignm length: 250
Alignm identity: 185
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 596-841
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 148, 0

Conread position: 598-838
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 230, 62

Conread position: 598-841
Cow position:
Alignm length: 244
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 607-840
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 0

Conread position: 613-839
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 622-812
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 624-838
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 99

Conread position: 625-839
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 165, 70

Conread position: 631-842
Cow position:
Alignm length: 215
Alignm identity: 163
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 159, 104

Conread position: 641-819
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 651-841
Cow position:
Alignm length: 191
Alignm identity: 145
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 70, 0

Conread position: 663-842
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 682-842
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 53

Conread position: 710-841
Cow position:
Alignm length: 134
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Show alignments to all cow chromosomes.