Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 318-841
Cow position:
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 25

Conread position: 327-466
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 18

Conread position: 328-492
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 17

Conread position: 328-518
Cow position:
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 9

Conread position: 329-815
Cow position:
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 329-839
Cow position:
Alignm length: 525
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 19

Conread position: 329-840
Cow position:
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 329-842
Cow position:
Alignm length: 514
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 329-842
Cow position:
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 19

Conread position: 330-459
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 330-774
Cow position:
Alignm length: 446
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 330-829
Cow position:
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 330-838
Cow position:
Alignm length: 513
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 11

Conread position: 330-838
Cow position:
Alignm length: 526
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 52

Conread position: 330-839
Cow position:
Alignm length: 525
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 15

Conread position: 330-839
Cow position:
Alignm length: 515
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 330-841
Cow position:
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 330-842
Cow position:
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 331-841
Cow position:
Alignm length: 515
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 333-838
Cow position:
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 334-470
Cow position:
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 9

Conread position: 334-689
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 11

Conread position: 334-822
Cow position:
Alignm length: 493
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 335-644
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 10

Conread position: 335-840
Cow position:
Alignm length: 506
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 336-841
Cow position:
Alignm length: 514
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 199

Conread position: 337-822
Cow position:
Alignm length: 492
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 16

Conread position: 337-842
Cow position:
Alignm length: 514
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 8

Conread position: 342-470
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 112

Conread position: 342-842
Cow position:
Alignm length: 505
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 39

Conread position: 344-776
Cow position:
Alignm length: 437
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 344-823
Cow position:
Alignm length: 485
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 147

Conread position: 344-842
Cow position:
Alignm length: 504
Alignm identity: 316
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 61

Conread position: 344-842
Cow position:
Alignm length: 504
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 100

Conread position: 344-842
Cow position:
Alignm length: 509
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 102

Conread position: 344-842
Cow position:
Alignm length: 507
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 131

Conread position: 345-675
Cow position:
Alignm length: 335
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 103

Conread position: 345-708
Cow position:
Alignm length: 372
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 345-838
Cow position:
Alignm length: 499
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 345-838
Cow position:
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 346-842
Cow position:
Alignm length: 501
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 186

Conread position: 347-559
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 42, 0

Conread position: 347-740
Cow position:
Alignm length: 400
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 347-838
Cow position:
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 34

Conread position: 347-839
Cow position:
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 118

Conread position: 347-840
Cow position:
Alignm length: 499
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 185

Conread position: 347-840
Cow position:
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 116

Conread position: 347-840
Cow position:
Alignm length: 498
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 184

Conread position: 347-840
Cow position:
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 84

Conread position: 347-840
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 80

Conread position: 347-842
Cow position:
Alignm length: 500
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 347-842
Cow position:
Alignm length: 515
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 46

Conread position: 348-712
Cow position:
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 180

Conread position: 348-841
Cow position:
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-841
Cow position:
Alignm length: 498
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 184

Conread position: 349-704
Cow position:
Alignm length: 361
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 115

Conread position: 352-523
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 69

Conread position: 355-842
Cow position:
Alignm length: 490
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 358-837
Cow position:
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 31

Conread position: 363-839
Cow position:
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 26

Conread position: 364-837
Cow position:
Alignm length: 477
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 54

Conread position: 371-842
Cow position:
Alignm length: 485
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 127

Conread position: 374-839
Cow position:
Alignm length: 468
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 154

Conread position: 374-842
Cow position:
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 164

Conread position: 381-841
Cow position:
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 147

Conread position: 381-841
Cow position:
Alignm length: 463
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 381-842
Cow position:
Alignm length: 463
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 401, 122

Conread position: 385-842
Cow position:
Alignm length: 459
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 58

Conread position: 389-842
Cow position:
Alignm length: 454
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 398-842
Cow position:
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 399-839
Cow position:
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 134

Conread position: 399-841
Cow position:
Alignm length: 446
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 69

Conread position: 408-838
Cow position:
Alignm length: 435
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 21

Conread position: 423-842
Cow position:
Alignm length: 420
Alignm identity: 266
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 433-842
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 29

Conread position: 438-841
Cow position:
Alignm length: 404
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 442-841
Cow position:
Alignm length: 400
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 451-806
Cow position:
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 76

Conread position: 462-838
Cow position:
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 462-842
Cow position:
Alignm length: 381
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 477-839
Cow position:
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 477-842
Cow position:
Alignm length: 368
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 48

Conread position: 478-842
Cow position:
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 49

Conread position: 481-838
Cow position:
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 486-837
Cow position:
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 486-842
Cow position:
Alignm length: 363
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 179

Conread position: 486-842
Cow position:
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 29

Conread position: 498-838
Cow position:
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 503-838
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 509-842
Cow position:
Alignm length: 334
Alignm identity: 223
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 19, 0

Conread position: 515-839
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 537-842
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 198

Conread position: 538-836
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 213

Conread position: 547-813
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 205

Conread position: 551-842
Cow position:
Alignm length: 298
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 554-840
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 182

Conread position: 558-842
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 189

Conread position: 567-839
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 126

Conread position: 576-822
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 168, 0

Conread position: 576-838
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 24, 0

Conread position: 576-842
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 578-842
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 199, 22

Conread position: 583-838
Cow position:
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 13, 31

Conread position: 588-823
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 94, 0

Conread position: 588-838
Cow position:
Alignm length: 252
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 44

Conread position: 588-842
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 156, 87

Conread position: 590-841
Cow position:
Alignm length: 252
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 593-823
Cow position:
Alignm length: 232
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 19, 90

Conread position: 593-842
Cow position:
Alignm length: 251
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 235, 142

Conread position: 593-842
Cow position:
Alignm length: 251
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 197, 142

Conread position: 595-842
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 0

Conread position: 600-842
Cow position:
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 603-842
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 606-842
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 607-818
Cow position:
Alignm length: 217
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 122

Conread position: 613-836
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 168, 53

Conread position: 613-842
Cow position:
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 0

Conread position: 618-817
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 106, 41

Conread position: 623-842
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 41

Conread position: 631-836
Cow position:
Alignm length: 207
Alignm identity: 153
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 52, 7

Conread position: 633-840
Cow position:
Alignm length: 208
Alignm identity: 140
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 634-842
Cow position:
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 634-842
Cow position:
Alignm length: 209
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 639-842
Cow position:
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 641-841
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 645-841
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 654-842
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 656-842
Cow position:
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 675-842
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 58

Conread position: 676-823
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 685-842
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 697-823
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 700-841
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 5

Conread position: 714-840
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 0

Show alignments to all cow chromosomes.