Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 326-842
Cow position:
Alignm length: 520
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 326-842
Cow position:
Alignm length: 520
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 95

Conread position: 329-652
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 57, 16

Conread position: 329-657
Cow position:
Alignm length: 333
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 18

Conread position: 329-785
Cow position:
Alignm length: 464
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 16

Conread position: 329-819
Cow position:
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 12

Conread position: 329-822
Cow position:
Alignm length: 509
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 329-833
Cow position:
Alignm length: 508
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 18

Conread position: 329-834
Cow position:
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 16

Conread position: 329-839
Cow position:
Alignm length: 512
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 16

Conread position: 329-840
Cow position:
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 329-842
Cow position:
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 16

Conread position: 330-609
Cow position:
Alignm length: 298
Alignm identity: 217
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 61, 15

Conread position: 330-670
Cow position:
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 330-806
Cow position:
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 330-838
Cow position:
Alignm length: 527
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 59

Conread position: 330-840
Cow position:
Alignm length: 516
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-841
Cow position:
Alignm length: 517
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 330-842
Cow position:
Alignm length: 519
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 15

Conread position: 330-842
Cow position:
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 330-842
Cow position:
Alignm length: 517
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 15

Conread position: 330-842
Cow position:
Alignm length: 513
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 330-842
Cow position:
Alignm length: 513
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 330-842
Cow position:
Alignm length: 519
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 330-842
Cow position:
Alignm length: 517
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 18

Conread position: 331-827
Cow position:
Alignm length: 527
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 331-842
Cow position:
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 334-689
Cow position:
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 14

Conread position: 334-784
Cow position:
Alignm length: 455
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 334-842
Cow position:
Alignm length: 518
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 334-842
Cow position:
Alignm length: 520
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 11

Conread position: 334-842
Cow position:
Alignm length: 510
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 11

Conread position: 335-835
Cow position:
Alignm length: 505
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 204

Conread position: 335-840
Cow position:
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 10

Conread position: 336-842
Cow position:
Alignm length: 510
Alignm identity: 325
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 12

Conread position: 342-839
Cow position:
Alignm length: 502
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 188

Conread position: 344-523
Cow position:
Alignm length: 184
Alignm identity: 146
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 344-537
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 71

Conread position: 345-838
Cow position:
Alignm length: 497
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 23

Conread position: 345-839
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 185

Conread position: 347-510
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 115

Conread position: 347-712
Cow position:
Alignm length: 368
Alignm identity: 243
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 129, 113

Conread position: 347-756
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 224

Conread position: 347-823
Cow position:
Alignm length: 501
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 183

Conread position: 347-839
Cow position:
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 184

Conread position: 347-841
Cow position:
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 185

Conread position: 347-842
Cow position:
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 95

Conread position: 347-842
Cow position:
Alignm length: 502
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 347-842
Cow position:
Alignm length: 500
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 79

Conread position: 347-842
Cow position:
Alignm length: 505
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 39

Conread position: 347-842
Cow position:
Alignm length: 507
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 44

Conread position: 348-822
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 348-842
Cow position:
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 351-842
Cow position:
Alignm length: 502
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 187

Conread position: 356-842
Cow position:
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 37

Conread position: 366-842
Cow position:
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 92

Conread position: 373-842
Cow position:
Alignm length: 473
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 156

Conread position: 374-840
Cow position:
Alignm length: 467
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 374-842
Cow position:
Alignm length: 474
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 5

Conread position: 381-836
Cow position:
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 12

Conread position: 381-841
Cow position:
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 147

Conread position: 389-831
Cow position:
Alignm length: 448
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 59

Conread position: 396-838
Cow position:
Alignm length: 444
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 20

Conread position: 396-842
Cow position:
Alignm length: 449
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 123

Conread position: 410-823
Cow position:
Alignm length: 414
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 411-842
Cow position:
Alignm length: 432
Alignm identity: 271
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 412-839
Cow position:
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 115

Conread position: 427-838
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 102

Conread position: 431-841
Cow position:
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 434-842
Cow position:
Alignm length: 413
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 93

Conread position: 438-841
Cow position:
Alignm length: 404
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 442-839
Cow position:
Alignm length: 398
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 443-827
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 80, 101

Conread position: 455-837
Cow position:
Alignm length: 383
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 463-839
Cow position:
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 485-842
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 486-841
Cow position:
Alignm length: 358
Alignm identity: 236
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 26

Conread position: 486-842
Cow position:
Alignm length: 361
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 41

Conread position: 492-838
Cow position:
Alignm length: 347
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 493-822
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 182, 34

Conread position: 496-842
Cow position:
Alignm length: 352
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 20

Conread position: 498-820
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 509-842
Cow position:
Alignm length: 334
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 535-842
Cow position:
Alignm length: 310
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 126

Conread position: 536-839
Cow position:
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 541-842
Cow position:
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 545-842
Cow position:
Alignm length: 298
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 143, 0

Conread position: 553-823
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 14

Conread position: 555-841
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 177, 0

Conread position: 556-806
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 57

Conread position: 558-838
Cow position:
Alignm length: 281
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 572-842
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 573-789
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 96

Conread position: 576-841
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 106

Conread position: 584-841
Cow position:
Alignm length: 266
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 53

Conread position: 584-842
Cow position:
Alignm length: 259
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 144, 0

Conread position: 587-842
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 18, 149

Conread position: 588-841
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 84, 111

Conread position: 588-842
Cow position:
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 223, 94

Conread position: 589-815
Cow position:
Alignm length: 227
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 0

Conread position: 589-842
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 194, 143

Conread position: 591-842
Cow position:
Alignm length: 255
Alignm identity: 192
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 202, 33

Conread position: 591-842
Cow position:
Alignm length: 253
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 92, 160

Conread position: 595-840
Cow position:
Alignm length: 246
Alignm identity: 171
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 138, 0

Conread position: 596-842
Cow position:
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 137

Conread position: 597-842
Cow position:
Alignm length: 246
Alignm identity: 172
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 147, 0

Conread position: 598-842
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 600-842
Cow position:
Alignm length: 243
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 602-842
Cow position:
Alignm length: 241
Alignm identity: 181
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 0

Conread position: 604-820
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 129, 147

Conread position: 605-842
Cow position:
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 0

Conread position: 605-842
Cow position:
Alignm length: 241
Alignm identity: 178
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 167, 130

Conread position: 608-823
Cow position:
Alignm length: 216
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 609-842
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 139, 0

Conread position: 613-839
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 75, 0

Conread position: 616-842
Cow position:
Alignm length: 227
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 616-842
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 618-839
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 618-839
Cow position:
Alignm length: 223
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 204, 64

Conread position: 618-841
Cow position:
Alignm length: 232
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 41, 125

Conread position: 619-842
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 0

Conread position: 624-841
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 119, 0

Conread position: 625-838
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 24, 58

Conread position: 632-841
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 43

Conread position: 637-839
Cow position:
Alignm length: 203
Alignm identity: 153
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 98, 0

Conread position: 642-841
Cow position:
Alignm length: 201
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 115

Conread position: 648-842
Cow position:
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 677-839
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 679-840
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 56

Conread position: 695-842
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 710-842
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.