Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 308-842
Cow position:
Alignm length: 542
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 18

Conread position: 324-842
Cow position:
Alignm length: 519
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 328-838
Cow position:
Alignm length: 516
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 13

Conread position: 328-842
Cow position:
Alignm length: 532
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 17

Conread position: 329-470
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 329-523
Cow position:
Alignm length: 195
Alignm identity: 143
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 0

Conread position: 329-823
Cow position:
Alignm length: 505
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 16

Conread position: 329-838
Cow position:
Alignm length: 514
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 18

Conread position: 329-839
Cow position:
Alignm length: 511
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 329-841
Cow position:
Alignm length: 517
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 16

Conread position: 329-842
Cow position:
Alignm length: 517
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 63

Conread position: 329-842
Cow position:
Alignm length: 514
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 329-842
Cow position:
Alignm length: 517
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 18

Conread position: 330-471
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 15

Conread position: 330-541
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 15

Conread position: 330-623
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 58, 15

Conread position: 330-730
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-754
Cow position:
Alignm length: 429
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-788
Cow position:
Alignm length: 462
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 330-822
Cow position:
Alignm length: 495
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 15

Conread position: 330-842
Cow position:
Alignm length: 515
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 15

Conread position: 330-842
Cow position:
Alignm length: 526
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 15

Conread position: 331-823
Cow position:
Alignm length: 494
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 14

Conread position: 334-680
Cow position:
Alignm length: 348
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 11

Conread position: 334-839
Cow position:
Alignm length: 511
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 11

Conread position: 334-840
Cow position:
Alignm length: 531
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 11

Conread position: 334-842
Cow position:
Alignm length: 514
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 11

Conread position: 335-524
Cow position:
Alignm length: 195
Alignm identity: 142
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 76

Conread position: 335-706
Cow position:
Alignm length: 372
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 335-838
Cow position:
Alignm length: 511
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 8

Conread position: 335-841
Cow position:
Alignm length: 511
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 12

Conread position: 335-842
Cow position:
Alignm length: 510
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 8

Conread position: 336-841
Cow position:
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 9

Conread position: 336-842
Cow position:
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 337-703
Cow position:
Alignm length: 372
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 8

Conread position: 337-838
Cow position:
Alignm length: 504
Alignm identity: 325
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 17

Conread position: 337-842
Cow position:
Alignm length: 512
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 344-823
Cow position:
Alignm length: 486
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 64

Conread position: 344-842
Cow position:
Alignm length: 509
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 109

Conread position: 345-842
Cow position:
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 163

Conread position: 347-835
Cow position:
Alignm length: 502
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 409

Conread position: 347-837
Cow position:
Alignm length: 492
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 384, 42

Conread position: 347-839
Cow position:
Alignm length: 493
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 347-840
Cow position:
Alignm length: 499
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 93

Conread position: 347-840
Cow position:
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 347-842
Cow position:
Alignm length: 500
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 85

Conread position: 348-841
Cow position:
Alignm length: 498
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 348-842
Cow position:
Alignm length: 503
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 92

Conread position: 348-842
Cow position:
Alignm length: 496
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 39

Conread position: 350-839
Cow position:
Alignm length: 520
Alignm identity: 334
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 204

Conread position: 350-840
Cow position:
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 351-563
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 355-841
Cow position:
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 33

Conread position: 358-841
Cow position:
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 170

Conread position: 364-842
Cow position:
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 146

Conread position: 374-842
Cow position:
Alignm length: 470
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 125

Conread position: 375-842
Cow position:
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 0

Conread position: 375-842
Cow position:
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 46

Conread position: 381-839
Cow position:
Alignm length: 462
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 57

Conread position: 385-839
Cow position:
Alignm length: 455
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 385-842
Cow position:
Alignm length: 463
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 142

Conread position: 385-842
Cow position:
Alignm length: 460
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 43

Conread position: 386-842
Cow position:
Alignm length: 461
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 143

Conread position: 393-842
Cow position:
Alignm length: 451
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 16

Conread position: 395-823
Cow position:
Alignm length: 433
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 123

Conread position: 395-836
Cow position:
Alignm length: 444
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 121

Conread position: 395-841
Cow position:
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 13

Conread position: 399-839
Cow position:
Alignm length: 442
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 128

Conread position: 400-842
Cow position:
Alignm length: 443
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 406-841
Cow position:
Alignm length: 438
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 123

Conread position: 411-821
Cow position:
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 64

Conread position: 412-841
Cow position:
Alignm length: 432
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 116

Conread position: 431-818
Cow position:
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 31

Conread position: 434-839
Cow position:
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 36

Conread position: 435-841
Cow position:
Alignm length: 407
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 447-841
Cow position:
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 453-841
Cow position:
Alignm length: 390
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 73

Conread position: 468-842
Cow position:
Alignm length: 375
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 481-842
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 486-840
Cow position:
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 486-842
Cow position:
Alignm length: 358
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 41

Conread position: 489-787
Cow position:
Alignm length: 299
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 489-842
Cow position:
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 38

Conread position: 493-842
Cow position:
Alignm length: 354
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 214

Conread position: 502-840
Cow position:
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 25

Conread position: 504-842
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 21

Conread position: 519-842
Cow position:
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 121

Conread position: 536-823
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 146, 0

Conread position: 536-841
Cow position:
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 204

Conread position: 536-842
Cow position:
Alignm length: 307
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 537-842
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 136

Conread position: 542-839
Cow position:
Alignm length: 302
Alignm identity: 213
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 37, 21

Conread position: 543-813
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 201, 20

Conread position: 543-836
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 24

Conread position: 545-842
Cow position:
Alignm length: 298
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 552-842
Cow position:
Alignm length: 297
Alignm identity: 213
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 189

Conread position: 554-842
Cow position:
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 11

Conread position: 555-841
Cow position:
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 181

Conread position: 555-842
Cow position:
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 133, 29

Conread position: 555-842
Cow position:
Alignm length: 291
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 8

Conread position: 557-837
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 176, 0

Conread position: 557-840
Cow position:
Alignm length: 284
Alignm identity: 199
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 175, 0

Conread position: 557-842
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 126, 37

Conread position: 559-839
Cow position:
Alignm length: 287
Alignm identity: 196
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 78, 191

Conread position: 560-840
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 83

Conread position: 569-842
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 148

Conread position: 575-841
Cow position:
Alignm length: 273
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 76

Conread position: 576-808
Cow position:
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 0

Conread position: 576-840
Cow position:
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 174

Conread position: 576-841
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 576-842
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 249, 159

Conread position: 588-822
Cow position:
Alignm length: 239
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 120, 103

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 0

Conread position: 588-842
Cow position:
Alignm length: 257
Alignm identity: 193
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 194, 166

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 146, 0

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 142, 0

Conread position: 592-842
Cow position:
Alignm length: 253
Alignm identity: 168
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 64, 144

Conread position: 597-842
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 133, 0

Conread position: 606-842
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 140

Conread position: 608-842
Cow position:
Alignm length: 235
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 0

Conread position: 610-842
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 141

Conread position: 613-842
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 127

Conread position: 614-842
Cow position:
Alignm length: 229
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 620-842
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 622-841
Cow position:
Alignm length: 228
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 53, 121

Conread position: 624-834
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 77, 95

Conread position: 631-841
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 640-840
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 652-842
Cow position:
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 654-842
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 79, 0

Conread position: 662-842
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 670-842
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 85, 51

Conread position: 675-842
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 0

Conread position: 700-842
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 718-841
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.