Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 62-842
Cow position:
Alignm length: 784
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 610, 547

Conread position: 325-732
Cow position:
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 20

Conread position: 328-482
Cow position:
Alignm length: 155
Alignm identity: 126
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 17, 0

Conread position: 328-842
Cow position:
Alignm length: 530
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 17

Conread position: 329-788
Cow position:
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 16

Conread position: 329-839
Cow position:
Alignm length: 517
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 24

Conread position: 329-840
Cow position:
Alignm length: 514
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 61

Conread position: 329-840
Cow position:
Alignm length: 531
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 16

Conread position: 329-841
Cow position:
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 18

Conread position: 329-842
Cow position:
Alignm length: 520
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 16

Conread position: 329-842
Cow position:
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 18

Conread position: 330-466
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 15

Conread position: 330-839
Cow position:
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 18

Conread position: 330-841
Cow position:
Alignm length: 512
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 330-841
Cow position:
Alignm length: 520
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 15

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 17

Conread position: 330-842
Cow position:
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 15

Conread position: 334-556
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 11

Conread position: 334-667
Cow position:
Alignm length: 334
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 334-823
Cow position:
Alignm length: 492
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 11

Conread position: 334-839
Cow position:
Alignm length: 514
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 11

Conread position: 334-839
Cow position:
Alignm length: 507
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 335-813
Cow position:
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 337-837
Cow position:
Alignm length: 501
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 337-838
Cow position:
Alignm length: 508
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 64

Conread position: 337-841
Cow position:
Alignm length: 509
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 8

Conread position: 337-842
Cow position:
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 8

Conread position: 338-561
Cow position:
Alignm length: 232
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 7

Conread position: 341-841
Cow position:
Alignm length: 501
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 0

Conread position: 342-842
Cow position:
Alignm length: 508
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 12

Conread position: 342-842
Cow position:
Alignm length: 504
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 188

Conread position: 344-621
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 144

Conread position: 344-787
Cow position:
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 65

Conread position: 344-842
Cow position:
Alignm length: 510
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 93

Conread position: 345-759
Cow position:
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 105

Conread position: 345-817
Cow position:
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 79

Conread position: 347-507
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 347-547
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 36, 142

Conread position: 347-613
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 245, 34

Conread position: 347-755
Cow position:
Alignm length: 415
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 179

Conread position: 347-822
Cow position:
Alignm length: 485
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 10

Conread position: 347-841
Cow position:
Alignm length: 502
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 184

Conread position: 347-842
Cow position:
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 178

Conread position: 347-842
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 55, 42

Conread position: 348-838
Cow position:
Alignm length: 498
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 348-838
Cow position:
Alignm length: 497
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 182

Conread position: 348-841
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 362-744
Cow position:
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 375-842
Cow position:
Alignm length: 469
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 54

Conread position: 381-839
Cow position:
Alignm length: 459
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 381-842
Cow position:
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 94

Conread position: 385-841
Cow position:
Alignm length: 461
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 78

Conread position: 386-842
Cow position:
Alignm length: 457
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 389-842
Cow position:
Alignm length: 464
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 98

Conread position: 391-842
Cow position:
Alignm length: 454
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 46

Conread position: 395-842
Cow position:
Alignm length: 449
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 19

Conread position: 398-842
Cow position:
Alignm length: 446
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 407-842
Cow position:
Alignm length: 437
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 122

Conread position: 416-842
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 12

Conread position: 427-842
Cow position:
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 233

Conread position: 428-842
Cow position:
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 433-842
Cow position:
Alignm length: 412
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 14

Conread position: 435-842
Cow position:
Alignm length: 415
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 324, 49

Conread position: 439-842
Cow position:
Alignm length: 405
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 54

Conread position: 453-822
Cow position:
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 28

Conread position: 455-839
Cow position:
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 79

Conread position: 462-842
Cow position:
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 24

Conread position: 462-842
Cow position:
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 29

Conread position: 477-842
Cow position:
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 51

Conread position: 482-841
Cow position:
Alignm length: 367
Alignm identity: 231
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 47

Conread position: 485-841
Cow position:
Alignm length: 358
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 175, 42

Conread position: 485-842
Cow position:
Alignm length: 361
Alignm identity: 237
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 17

Conread position: 487-842
Cow position:
Alignm length: 360
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 40

Conread position: 503-842
Cow position:
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 25

Conread position: 509-842
Cow position:
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 18

Conread position: 509-842
Cow position:
Alignm length: 335
Alignm identity: 227
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 303, 18

Conread position: 509-842
Cow position:
Alignm length: 335
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 310, 19

Conread position: 527-839
Cow position:
Alignm length: 313
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 36, 0

Conread position: 535-833
Cow position:
Alignm length: 300
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 58

Conread position: 535-839
Cow position:
Alignm length: 305
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 539-839
Cow position:
Alignm length: 308
Alignm identity: 215
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 243, 28

Conread position: 540-842
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 152, 36

Conread position: 544-815
Cow position:
Alignm length: 275
Alignm identity: 192
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 110, 19

Conread position: 544-841
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 0

Conread position: 552-833
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 197

Conread position: 557-842
Cow position:
Alignm length: 286
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 576-841
Cow position:
Alignm length: 272
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 576-842
Cow position:
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 113, 137

Conread position: 578-815
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 157, 0

Conread position: 581-838
Cow position:
Alignm length: 258
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 588-838
Cow position:
Alignm length: 252
Alignm identity: 169
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 100, 75

Conread position: 588-842
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 81

Conread position: 589-842
Cow position:
Alignm length: 254
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 0

Conread position: 593-842
Cow position:
Alignm length: 251
Alignm identity: 186
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 232, 20

Conread position: 596-791
Cow position:
Alignm length: 197
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 190, 139

Conread position: 601-839
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 134, 0

Conread position: 613-842
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 23

Conread position: 618-842
Cow position:
Alignm length: 225
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 623-840
Cow position:
Alignm length: 218
Alignm identity: 166
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 624-839
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 111, 0

Conread position: 624-839
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 112

Conread position: 625-842
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 123, 0

Conread position: 628-842
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 84, 110

Conread position: 628-842
Cow position:
Alignm length: 218
Alignm identity: 155
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 21, 36

Conread position: 631-838
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 5, 105

Conread position: 632-842
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 6, 64

Conread position: 632-842
Cow position:
Alignm length: 211
Alignm identity: 160
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 116, 0

Conread position: 651-842
Cow position:
Alignm length: 192
Alignm identity: 137
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 656-772
Cow position:
Alignm length: 122
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 97

Conread position: 661-838
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 661-842
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 675-842
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 48, 74

Conread position: 693-842
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 42, 0

Show alignments to all cow chromosomes.