Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 328-842
Cow position:
Alignm length: 515
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 329-748
Cow position:
Alignm length: 427
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 329-839
Cow position:
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 496, 19

Conread position: 329-842
Cow position:
Alignm length: 521
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 16

Conread position: 329-842
Cow position:
Alignm length: 529
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 329-842
Cow position:
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 18

Conread position: 329-842
Cow position:
Alignm length: 514
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 330-825
Cow position:
Alignm length: 508
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 15

Conread position: 330-838
Cow position:
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 34

Conread position: 330-839
Cow position:
Alignm length: 512
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 13

Conread position: 330-839
Cow position:
Alignm length: 515
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 99

Conread position: 330-842
Cow position:
Alignm length: 516
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 330-842
Cow position:
Alignm length: 517
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 13

Conread position: 330-842
Cow position:
Alignm length: 516
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 15

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 15

Conread position: 333-696
Cow position:
Alignm length: 372
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 334-547
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 11

Conread position: 334-579
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 50, 11

Conread position: 334-739
Cow position:
Alignm length: 411
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 11

Conread position: 334-839
Cow position:
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 334-840
Cow position:
Alignm length: 512
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 18

Conread position: 334-842
Cow position:
Alignm length: 514
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 335-759
Cow position:
Alignm length: 439
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 10

Conread position: 335-841
Cow position:
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 10

Conread position: 336-820
Cow position:
Alignm length: 495
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 344-680
Cow position:
Alignm length: 343
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 103

Conread position: 344-728
Cow position:
Alignm length: 385
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 0

Conread position: 345-841
Cow position:
Alignm length: 505
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 345-842
Cow position:
Alignm length: 502
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 185

Conread position: 347-695
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 113

Conread position: 347-753
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 182

Conread position: 347-754
Cow position:
Alignm length: 424
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 39

Conread position: 347-755
Cow position:
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 347-838
Cow position:
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 123

Conread position: 347-839
Cow position:
Alignm length: 497
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 88

Conread position: 347-840
Cow position:
Alignm length: 504
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 185

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 347-842
Cow position:
Alignm length: 512
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 76

Conread position: 347-842
Cow position:
Alignm length: 498
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 146

Conread position: 348-842
Cow position:
Alignm length: 506
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 182

Conread position: 351-841
Cow position:
Alignm length: 504
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 179

Conread position: 371-842
Cow position:
Alignm length: 475
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 79

Conread position: 374-842
Cow position:
Alignm length: 471
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 45

Conread position: 381-831
Cow position:
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 197

Conread position: 381-841
Cow position:
Alignm length: 464
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 128

Conread position: 381-842
Cow position:
Alignm length: 463
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 444, 99

Conread position: 385-842
Cow position:
Alignm length: 461
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 144

Conread position: 385-842
Cow position:
Alignm length: 458
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 0

Conread position: 400-812
Cow position:
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 387, 127

Conread position: 402-839
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 402-842
Cow position:
Alignm length: 443
Alignm identity: 273
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 166, 56

Conread position: 414-821
Cow position:
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 70

Conread position: 416-842
Cow position:
Alignm length: 442
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 43

Conread position: 420-839
Cow position:
Alignm length: 427
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 38

Conread position: 421-842
Cow position:
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 429-842
Cow position:
Alignm length: 418
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 48

Conread position: 431-840
Cow position:
Alignm length: 412
Alignm identity: 272
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 10, 97

Conread position: 445-842
Cow position:
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 452-842
Cow position:
Alignm length: 399
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 75

Conread position: 456-842
Cow position:
Alignm length: 389
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 462-842
Cow position:
Alignm length: 384
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 65

Conread position: 464-842
Cow position:
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 63

Conread position: 481-842
Cow position:
Alignm length: 362
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 486-839
Cow position:
Alignm length: 358
Alignm identity: 239
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 160, 41

Conread position: 487-842
Cow position:
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 52

Conread position: 494-827
Cow position:
Alignm length: 339
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 59

Conread position: 498-832
Cow position:
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 31

Conread position: 500-842
Cow position:
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 0

Conread position: 511-827
Cow position:
Alignm length: 317
Alignm identity: 223
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 16, 0

Conread position: 516-842
Cow position:
Alignm length: 328
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 13

Conread position: 529-841
Cow position:
Alignm length: 313
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 539-842
Cow position:
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 547-786
Cow position:
Alignm length: 241
Alignm identity: 182
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 136, 189

Conread position: 554-841
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 182

Conread position: 558-822
Cow position:
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 558-823
Cow position:
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 124, 0

Conread position: 558-839
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 44, 116

Conread position: 560-842
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 9, 17

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 27, 0

Conread position: 584-840
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 0

Conread position: 588-838
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 154, 95

Conread position: 588-840
Cow position:
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 588-842
Cow position:
Alignm length: 257
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 139

Conread position: 598-839
Cow position:
Alignm length: 242
Alignm identity: 178
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 600-842
Cow position:
Alignm length: 243
Alignm identity: 182
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 135, 0

Conread position: 602-839
Cow position:
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 604-842
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 54

Conread position: 605-842
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 220, 19

Conread position: 607-839
Cow position:
Alignm length: 233
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 608-822
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 124

Conread position: 608-842
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 618-841
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 0

Conread position: 621-840
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 204, 114

Conread position: 623-823
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 72

Conread position: 627-841
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 193, 119

Conread position: 634-842
Cow position:
Alignm length: 209
Alignm identity: 157
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 101, 0

Conread position: 636-839
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 99

Conread position: 647-842
Cow position:
Alignm length: 196
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 652-842
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 96, 0

Conread position: 656-842
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 660-842
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 662-839
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 109, 5

Conread position: 664-842
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 84, 0

Conread position: 668-842
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 681-833
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 74, 113

Conread position: 682-838
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 691-842
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 706-842
Cow position:
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.