Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 323-716
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 22

Conread position: 328-755
Cow position:
Alignm length: 431
Alignm identity: 280
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 405, 17

Conread position: 328-842
Cow position:
Alignm length: 517
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 19

Conread position: 329-512
Cow position:
Alignm length: 189
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 329-842
Cow position:
Alignm length: 522
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 329-842
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 16

Conread position: 329-842
Cow position:
Alignm length: 519
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 330-495
Cow position:
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 15

Conread position: 330-838
Cow position:
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 330-838
Cow position:
Alignm length: 512
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 330-841
Cow position:
Alignm length: 514
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 79

Conread position: 330-842
Cow position:
Alignm length: 524
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 58

Conread position: 330-842
Cow position:
Alignm length: 522
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 331-823
Cow position:
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 33

Conread position: 334-644
Cow position:
Alignm length: 319
Alignm identity: 211
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 11

Conread position: 334-776
Cow position:
Alignm length: 444
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 13

Conread position: 334-819
Cow position:
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 334-834
Cow position:
Alignm length: 504
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 11

Conread position: 334-838
Cow position:
Alignm length: 508
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 334-842
Cow position:
Alignm length: 516
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 11

Conread position: 334-842
Cow position:
Alignm length: 515
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 335-841
Cow position:
Alignm length: 513
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 104

Conread position: 335-842
Cow position:
Alignm length: 510
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 10

Conread position: 336-492
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 339-808
Cow position:
Alignm length: 470
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 339-841
Cow position:
Alignm length: 507
Alignm identity: 330
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 166, 6

Conread position: 341-842
Cow position:
Alignm length: 509
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 179

Conread position: 343-842
Cow position:
Alignm length: 505
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 344-709
Cow position:
Alignm length: 368
Alignm identity: 244
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 213, 185

Conread position: 344-780
Cow position:
Alignm length: 438
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 45

Conread position: 344-812
Cow position:
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 34

Conread position: 344-838
Cow position:
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 45

Conread position: 344-842
Cow position:
Alignm length: 501
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 64

Conread position: 344-842
Cow position:
Alignm length: 506
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 81

Conread position: 345-840
Cow position:
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 188

Conread position: 345-841
Cow position:
Alignm length: 500
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 184

Conread position: 347-561
Cow position:
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 144, 0

Conread position: 347-838
Cow position:
Alignm length: 495
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 42

Conread position: 347-838
Cow position:
Alignm length: 498
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 185

Conread position: 347-838
Cow position:
Alignm length: 496
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 151

Conread position: 347-840
Cow position:
Alignm length: 496
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 65

Conread position: 347-840
Cow position:
Alignm length: 498
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 347-840
Cow position:
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 185

Conread position: 347-842
Cow position:
Alignm length: 500
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 97

Conread position: 347-842
Cow position:
Alignm length: 504
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 184

Conread position: 347-842
Cow position:
Alignm length: 503
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 14

Conread position: 347-842
Cow position:
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 109

Conread position: 348-482
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 348-525
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 80, 41

Conread position: 348-839
Cow position:
Alignm length: 496
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 350-823
Cow position:
Alignm length: 477
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 113

Conread position: 350-838
Cow position:
Alignm length: 505
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 191

Conread position: 368-842
Cow position:
Alignm length: 480
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 371-838
Cow position:
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 69

Conread position: 377-842
Cow position:
Alignm length: 467
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 28

Conread position: 381-841
Cow position:
Alignm length: 462
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 438, 25

Conread position: 381-842
Cow position:
Alignm length: 468
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 23

Conread position: 381-842
Cow position:
Alignm length: 464
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 148

Conread position: 382-838
Cow position:
Alignm length: 457
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 382-842
Cow position:
Alignm length: 467
Alignm identity: 296
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 67, 151

Conread position: 385-838
Cow position:
Alignm length: 454
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 389-806
Cow position:
Alignm length: 418
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 389-842
Cow position:
Alignm length: 454
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 0

Conread position: 390-825
Cow position:
Alignm length: 438
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 139

Conread position: 395-838
Cow position:
Alignm length: 446
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 398-842
Cow position:
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 129

Conread position: 400-839
Cow position:
Alignm length: 440
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 408-842
Cow position:
Alignm length: 435
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 419-842
Cow position:
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 428-842
Cow position:
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 430-842
Cow position:
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 433-842
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 94

Conread position: 434-838
Cow position:
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 94

Conread position: 450-841
Cow position:
Alignm length: 393
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 375, 12

Conread position: 463-842
Cow position:
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 5

Conread position: 471-822
Cow position:
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 477-790
Cow position:
Alignm length: 321
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 50

Conread position: 477-823
Cow position:
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 52

Conread position: 477-842
Cow position:
Alignm length: 366
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 477-842
Cow position:
Alignm length: 369
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 50

Conread position: 479-805
Cow position:
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 479-839
Cow position:
Alignm length: 364
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 15

Conread position: 486-839
Cow position:
Alignm length: 355
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 42

Conread position: 490-842
Cow position:
Alignm length: 360
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 37

Conread position: 498-819
Cow position:
Alignm length: 323
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 25

Conread position: 498-842
Cow position:
Alignm length: 346
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 29

Conread position: 516-842
Cow position:
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 11

Conread position: 517-823
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 535-838
Cow position:
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 535-840
Cow position:
Alignm length: 309
Alignm identity: 208
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 144, 31

Conread position: 535-842
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 124, 29

Conread position: 543-839
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 140, 45

Conread position: 555-842
Cow position:
Alignm length: 288
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 558-842
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 566-836
Cow position:
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 245, 59

Conread position: 572-805
Cow position:
Alignm length: 234
Alignm identity: 174
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 576-833
Cow position:
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 576-840
Cow position:
Alignm length: 267
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 67, 158

Conread position: 576-842
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 160

Conread position: 581-838
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 51

Conread position: 587-822
Cow position:
Alignm length: 236
Alignm identity: 177
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 148, 0

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 588-842
Cow position:
Alignm length: 256
Alignm identity: 182
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 60, 143

Conread position: 591-822
Cow position:
Alignm length: 232
Alignm identity: 172
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 144, 0

Conread position: 592-842
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 51, 91

Conread position: 594-840
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 160, 0

Conread position: 597-842
Cow position:
Alignm length: 246
Alignm identity: 178
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 599-823
Cow position:
Alignm length: 229
Alignm identity: 177
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 140

Conread position: 600-840
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 600-841
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 127, 145

Conread position: 600-842
Cow position:
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 603-842
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 169, 0

Conread position: 607-835
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 610-822
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 165, 0

Conread position: 615-815
Cow position:
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 161, 114

Conread position: 615-838
Cow position:
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 138, 0

Conread position: 620-842
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 0

Conread position: 624-839
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 21

Conread position: 627-842
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 194, 105

Conread position: 632-842
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 643-839
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 189

Conread position: 643-842
Cow position:
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 644-837
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 110

Conread position: 652-822
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 92

Conread position: 654-842
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 179

Conread position: 662-788
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 666-842
Cow position:
Alignm length: 179
Alignm identity: 137
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 104, 25

Conread position: 668-841
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 15, 68

Conread position: 668-842
Cow position:
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 677-841
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 67

Conread position: 677-842
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 689-840
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 711-840
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 739-842
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.