Cow genome map
Conread name: | Thy1-THY010085D12 |
Conread position: | 329-733 |
Cow position: | chr23:15505148-15505547 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 329-780 |
Cow position: | chr23:11405270-11404823 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 19 |
Conread position: | 329-836 |
Cow position: | chr23:29271311-29271805 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 16 |
Conread position: | 329-841 |
Cow position: | chr23:11078693-11079192 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 16 |
Conread position: | 329-842 |
Cow position: | chr23:23470138-23470658 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 391 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 18 |
Conread position: | 330-643 |
Cow position: | chr23:26066330-26066638 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 330-698 |
Cow position: | chr23:8277423-8277056 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 15 |
Conread position: | 330-806 |
Cow position: | chr23:35324816-35324381 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 323 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 71, 15 |
Conread position: | 330-838 |
Cow position: | chr23:9393464-9392973 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 331-561 |
Cow position: | chr23:25554009-25554240 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 181 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 55, 14 |
Conread position: | 331-842 |
Cow position: | chr23:11814444-11813934 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 14 |
Conread position: | 334-548 |
Cow position: | chr23:14839768-14839558 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 52, 11 |
Conread position: | 334-690 |
Cow position: | chr23:26840589-26840954 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 334-820 |
Cow position: | chr23:29699880-29699409 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 19 |
Conread position: | 334-839 |
Cow position: | chr23:26305589-26306079 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 11 |
Conread position: | 336-840 |
Cow position: | chr23:11343918-11344409 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 0 |
Conread position: | 344-788 |
Cow position: | chr23:8100669-8101085 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 304 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 137, 72 |
Conread position: | 345-516 |
Cow position: | chr23:36748498-36748326 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 347-561 |
Cow position: | chr23:25670342-25670127 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 164 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 121, 181 |
Conread position: | 347-755 |
Cow position: | chr23:5624147-5623734 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 86 |
Conread position: | 347-842 |
Cow position: | chr23:8290886-8291377 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 97 |
Conread position: | 348-620 |
Cow position: | chr23:28546260-28545981 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 130 |
Conread position: | 349-822 |
Cow position: | chr23:2408781-2408316 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 183 |
Conread position: | 350-842 |
Cow position: | chr23:18446486-18446970 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 314 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 36, 95 |
Conread position: | 352-842 |
Cow position: | chr23:9712373-9711896 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 173 |
Conread position: | 355-842 |
Cow position: | chr23:25565433-25565909 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 165 |
Conread position: | 381-839 |
Cow position: | chr23:2532059-2531629 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 63 |
Conread position: | 381-841 |
Cow position: | chr23:19966888-19967338 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 386, 64 |
Conread position: | 381-842 |
Cow position: | chr23:16238108-16237649 (view UCSC Genome Browser custom track) |
Alignm length: | 467 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 149 |
Conread position: | 382-822 |
Cow position: | chr23:6593457-6593023 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 0 |
Conread position: | 384-841 |
Cow position: | chr23:977576-977132 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 0 |
Conread position: | 384-842 |
Cow position: | chr23:19002817-19002361 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 147 |
Conread position: | 389-839 |
Cow position: | chr23:1535597-1536026 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 182, 24 |
Conread position: | 399-822 |
Cow position: | chr23:31395641-31395242 (view UCSC Genome Browser custom track) |
Alignm length: | 424 |
Alignm identity: | 287 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 399-839 |
Cow position: | chr23:28830700-28831104 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 302 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 263, 9 |
Conread position: | 400-841 |
Cow position: | chr23:11459753-11459316 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 334, 127 |
Conread position: | 410-842 |
Cow position: | chr23:27899643-27900064 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 423-841 |
Cow position: | chr23:30913011-30912596 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 75 |
Conread position: | 428-842 |
Cow position: | chr23:36014399-36014789 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 275 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 48, 100 |
Conread position: | 455-842 |
Cow position: | chr23:21343973-21343590 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 73 |
Conread position: | 459-842 |
Cow position: | chr23:21659281-21659668 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 33 |
Conread position: | 477-841 |
Cow position: | chr23:16072583-16072936 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 188, 50 |
Conread position: | 490-842 |
Cow position: | chr23:16610433-16610103 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 30 |
Conread position: | 498-821 |
Cow position: | chr23:3715159-3715471 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 503-842 |
Cow position: | chr23:9642031-9641709 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 509-842 |
Cow position: | chr23:416551-416877 (view UCSC Genome Browser custom track) |
Alignm length: | 336 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 49 |
Conread position: | 517-838 |
Cow position: | chr23:4067521-4067828 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 223 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 518-841 |
Cow position: | chr23:8446555-8446244 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 222 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 42, 10 |
Conread position: | 526-842 |
Cow position: | chr23:30656754-30656450 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 538-842 |
Cow position: | chr23:14566318-14566016 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 209 |
Conread position: | 538-842 |
Cow position: | chr23:36462906-36462605 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 30 |
Conread position: | 540-842 |
Cow position: | chr23:14839336-14839025 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 219 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 541-840 |
Cow position: | chr23:33940717-33940428 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 0 |
Conread position: | 548-842 |
Cow position: | chr23:11993796-11994085 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 185, 0 |
Conread position: | 556-842 |
Cow position: | chr23:20435631-20435345 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 204 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 152, 147 |
Conread position: | 576-823 |
Cow position: | chr23:21630662-21630903 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 183 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 585-831 |
Cow position: | chr23:19166478-19166711 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 34, 80 |
Conread position: | 585-842 |
Cow position: | chr23:24613189-24613450 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 200 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 43, 110 |
Conread position: | 588-832 |
Cow position: | chr23:16170157-16170394 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 27 |
Conread position: | 588-842 |
Cow position: | chr23:37191120-37190869 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 157 |
Conread position: | 593-804 |
Cow position: | chr23:29033710-29033912 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 161 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 594-842 |
Cow position: | chr23:40890484-40890723 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 189 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 215, 20 |
Conread position: | 596-842 |
Cow position: | chr23:9653046-9652808 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 183 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 53, 9 |
Conread position: | 600-841 |
Cow position: | chr23:40371124-40370891 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 159 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 603-820 |
Cow position: | chr23:1670398-1670606 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 165 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 40, 22 |
Conread position: | 604-823 |
Cow position: | chr23:22582359-22582575 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 93, 123 |
Conread position: | 605-841 |
Cow position: | chr23:3873592-3873367 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 167 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 606-822 |
Cow position: | chr23:11973338-11973548 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 158 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 617-836 |
Cow position: | chr23:15710586-15710376 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 172 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 617-842 |
Cow position: | chr23:20781261-20781486 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 31, 82 |
Conread position: | 621-839 |
Cow position: | chr23:770790-770583 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 155 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 204, 104 |
Conread position: | 621-842 |
Cow position: | chr23:11564860-11564643 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 167 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 624-842 |
Cow position: | chr23:25554505-25554715 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 166 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 84, 64 |
Conread position: | 627-821 |
Cow position: | chr23:13359087-13359274 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 153 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 633-841 |
Cow position: | chr23:24562377-24562178 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 147 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 635-792 |
Cow position: | chr23:3745118-3745270 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 637-789 |
Cow position: | chr23:8930825-8930679 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 74, 53 |
Conread position: | 641-802 |
Cow position: | chr23:21445157-21445313 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 117 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 107, 0 |
Conread position: | 641-840 |
Cow position: | chr23:497090-496894 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 16, 104 |
Conread position: | 650-838 |
Cow position: | chr23:1924310-1924130 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 134 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 652-836 |
Cow position: | chr23:25358215-25358392 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 656-841 |
Cow position: | chr23:5691238-5691048 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 134 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 656-842 |
Cow position: | chr23:35926130-35926306 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 137 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 87, 0 |
Conread position: | 665-842 |
Cow position: | chr23:27523737-27523565 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 131 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 670-825 |
Cow position: | chr23:28700520-28700671 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 60, 74 |
Conread position: | 685-842 |
Cow position: | chr23:32662356-32662203 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 120 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 139, 68 |
Conread position: | 689-842 |
Cow position: | chr23:24504808-24504956 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 711-842 |
Cow position: | chr23:11434686-11434560 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.