Cow genome map


           Conread name:
           Thy1-THY010085D12
        

               Conread position:
               329-733
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               329-780
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               329-836
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               329-841
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               329-842
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               330-643
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               330-698
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               330-806
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               323
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               330-838
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               331-561
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               331-842
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 14
               

               Conread position:
               334-548
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               334-690
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 11
               

               Conread position:
               334-820
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 19
               

               Conread position:
               334-839
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               336-840
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 0
               

               Conread position:
               344-788
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               137, 72
               

               Conread position:
               345-516
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               347-561
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               121, 181
               

               Conread position:
               347-755
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 86
               

               Conread position:
               347-842
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               348-620
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               349-822
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 183
               

               Conread position:
               350-842
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               314
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               36, 95
               

               Conread position:
               352-842
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 173
               

               Conread position:
               355-842
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 165
               

               Conread position:
               381-839
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 63
               

               Conread position:
               381-841
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               386, 64
               

               Conread position:
               381-842
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 149
               

               Conread position:
               382-822
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               384-841
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               384-842
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 147
               

               Conread position:
               389-839
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 24
               

               Conread position:
               399-822
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               287
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               399-839
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               263, 9
               

               Conread position:
               400-841
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               334, 127
               

               Conread position:
               410-842
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               423-841
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               428-842
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               48, 100
               

               Conread position:
               455-842
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 73
               

               Conread position:
               459-842
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               477-841
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 50
               

               Conread position:
               490-842
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 30
               

               Conread position:
               498-821
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               503-842
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               509-842
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 49
               

               Conread position:
               517-838
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               518-841
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               526-842
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               538-842
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 209
               

               Conread position:
               538-842
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               540-842
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               541-840
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               548-842
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               556-842
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               204
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               152, 147
               

               Conread position:
               576-823
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               585-831
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               585-842
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               588-832
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               588-842
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 157
               

               Conread position:
               593-804
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               594-842
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               215, 20
               

               Conread position:
               596-842
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 9
               

               Conread position:
               600-841
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               603-820
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               604-823
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               93, 123
               

               Conread position:
               605-841
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               606-822
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               617-836
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               617-842
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               31, 82
               

               Conread position:
               621-839
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               204, 104
               

               Conread position:
               621-842
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               624-842
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 64
               

               Conread position:
               627-821
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               633-841
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               635-792
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               637-789
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 53
               

               Conread position:
               641-802
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               641-840
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               650-838
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               652-836
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               656-841
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               656-842
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               665-842
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               670-825
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               685-842
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               139, 68
               

               Conread position:
               689-842
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               711-842
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.