Cow genome map


           Conread name:
           Thy1-THY010085D12
        

               Conread position:
               325-840
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 7
               

               Conread position:
               326-836
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               329-823
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               329-839
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               329-841
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               329-842
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 5
               

               Conread position:
               329-842
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 16
               

               Conread position:
               330-511
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               54, 11
               

               Conread position:
               330-838
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               330-838
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               332-578
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               334-620
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               334-821
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               334-839
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               334-842
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               336-842
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 9
               

               Conread position:
               337-842
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 8
               

               Conread position:
               341-812
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 176
               

               Conread position:
               341-842
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 137
               

               Conread position:
               344-822
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               344-838
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               344-839
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 189
               

               Conread position:
               347-470
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               347-513
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               347-776
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               37, 63
               

               Conread position:
               347-841
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               347-841
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 106
               

               Conread position:
               347-842
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               348-841
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 184
               

               Conread position:
               374-842
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 15
               

               Conread position:
               411-838
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 117
               

               Conread position:
               420-842
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               428-783
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 138
               

               Conread position:
               446-838
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               238, 82
               

               Conread position:
               460-841
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               461-842
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               489-842
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               500-842
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               132, 29
               

               Conread position:
               509-838
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               511-842
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               526-842
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 0
               

               Conread position:
               537-788
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               177, 0
               

               Conread position:
               539-834
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 84
               

               Conread position:
               545-840
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               264, 80
               

               Conread position:
               554-842
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               129, 9
               

               Conread position:
               555-842
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               590-842
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               592-823
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               604-836
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               610-842
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               618-838
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               151, 115
               

               Conread position:
               618-842
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 15
               

               Conread position:
               618-842
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               636-839
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               641-841
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               645-838
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               645-840
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               123, 43
               

               Conread position:
               647-798
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               143, 85
               

               Conread position:
               649-831
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               654-823
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 82
               

               Conread position:
               672-842
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               674-842
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               67, 165
               
Show alignments to all cow chromosomes.