Cow genome map
| Conread name: | Thy1-THY010085D12 |
| Conread position: | 328-842 |
| Cow position: | chr26:30652913-30652393 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 330-812 |
| Cow position: | chr26:26238461-26238939 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 330-822 |
| Cow position: | chr26:19791934-19791462 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 330-839 |
| Cow position: | chr26:14364798-14364317 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 330-842 |
| Cow position: | chr26:9825668-9825161 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 15 |
| Conread position: | 330-842 |
| Cow position: | chr26:21012579-21013081 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 330-842 |
| Cow position: | chr26:31793998-31794501 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 334-715 |
| Cow position: | chr26:21859050-21859431 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 334-842 |
| Cow position: | chr26:6476211-6475704 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 334-842 |
| Cow position: | chr26:12126106-12125590 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 336-492 |
| Cow position: | chr26:8653658-8653503 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 336-534 |
| Cow position: | chr26:16719944-16720146 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 344-628 |
| Cow position: | chr26:4748689-4748417 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 179 |
| Conread position: | 344-825 |
| Cow position: | chr26:11303042-11303504 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 344-842 |
| Cow position: | chr26:799069-798573 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 89 |
| Conread position: | 347-833 |
| Cow position: | chr26:18918843-18918364 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 347-842 |
| Cow position: | chr26:1621125-1621610 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 348-841 |
| Cow position: | chr26:35560584-35560099 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 356-841 |
| Cow position: | chr26:6487599-6487124 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 15 |
| Conread position: | 366-842 |
| Cow position: | chr26:28422966-28422496 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 66 |
| Conread position: | 375-842 |
| Cow position: | chr26:21350990-21351425 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 378-842 |
| Cow position: | chr26:13706708-13706266 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 396-839 |
| Cow position: | chr26:26192216-26191786 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 132 |
| Conread position: | 408-841 |
| Cow position: | chr26:20182060-20182484 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 437-842 |
| Cow position: | chr26:28442696-28442288 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 309 |
| Conread position: | 445-786 |
| Cow position: | chr26:35101863-35102190 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 452-842 |
| Cow position: | chr26:880885-880501 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 75 |
| Conread position: | 453-842 |
| Cow position: | chr26:31035072-31034698 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 70 |
| Conread position: | 477-842 |
| Cow position: | chr26:19333926-19333572 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 51 |
| Conread position: | 479-840 |
| Cow position: | chr26:25403421-25403762 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 484-833 |
| Cow position: | chr26:8652214-8651870 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 45 |
| Conread position: | 486-841 |
| Cow position: | chr26:3922363-3922023 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 41 |
| Conread position: | 486-842 |
| Cow position: | chr26:3024128-3023755 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 189 |
| Conread position: | 490-841 |
| Cow position: | chr26:888494-888844 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 56, 25 |
| Conread position: | 498-842 |
| Cow position: | chr26:23272174-23272508 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 29 |
| Conread position: | 501-839 |
| Cow position: | chr26:1106801-1107127 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 26 |
| Conread position: | 503-842 |
| Cow position: | chr26:9603929-9604264 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 505-842 |
| Cow position: | chr26:24738219-24738546 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 539-805 |
| Cow position: | chr26:15513209-15512949 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 541-839 |
| Cow position: | chr26:16905774-16906075 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 210 |
| Conread position: | 546-841 |
| Cow position: | chr26:10575602-10575887 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 555-841 |
| Cow position: | chr26:12584555-12584280 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 557-841 |
| Cow position: | chr26:7200497-7200218 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 581-838 |
| Cow position: | chr26:29354059-29353794 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 588-842 |
| Cow position: | chr26:2389584-2389337 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 593-842 |
| Cow position: | chr26:9850610-9850355 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 40, 144 |
| Conread position: | 612-842 |
| Cow position: | chr26:20130576-20130354 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 614-837 |
| Cow position: | chr26:19561982-19562200 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 131, 118 |
| Conread position: | 615-841 |
| Cow position: | chr26:14737426-14737645 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 618-842 |
| Cow position: | chr26:14079958-14080177 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 101 |
| Conread position: | 621-842 |
| Cow position: | chr26:783426-783211 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 194, 54 |
| Conread position: | 626-842 |
| Cow position: | chr26:22250376-22250165 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 631-835 |
| Cow position: | chr26:17056942-17057141 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 60, 31 |
| Conread position: | 640-842 |
| Cow position: | chr26:10291848-10292044 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 647-836 |
| Cow position: | chr26:7941814-7942000 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 650-842 |
| Cow position: | chr26:9854049-9853865 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 651-842 |
| Cow position: | chr26:10813753-10813943 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 32, 100 |
| Conread position: | 652-817 |
| Cow position: | chr26:12238492-12238334 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 652-839 |
| Cow position: | chr26:4599278-4599097 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 666-839 |
| Cow position: | chr26:21242400-21242568 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 684-842 |
| Cow position: | chr26:17204887-17204726 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 57, 128 |
| Conread position: | 689-842 |
| Cow position: | chr26:6323242-6323387 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.