Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 328-842
Cow position:
Alignm length: 535
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 330-812
Cow position:
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 330-822
Cow position:
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 330-839
Cow position:
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 18

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 334-715
Cow position:
Alignm length: 386
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 11

Conread position: 334-842
Cow position:
Alignm length: 516
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 7

Conread position: 334-842
Cow position:
Alignm length: 523
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 11

Conread position: 336-492
Cow position:
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 9

Conread position: 336-534
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 9

Conread position: 344-628
Cow position:
Alignm length: 290
Alignm identity: 205
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 179

Conread position: 344-825
Cow position:
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 344-842
Cow position:
Alignm length: 511
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 89

Conread position: 347-833
Cow position:
Alignm length: 496
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 34

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-841
Cow position:
Alignm length: 498
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 356-841
Cow position:
Alignm length: 487
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 15

Conread position: 366-842
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 66

Conread position: 375-842
Cow position:
Alignm length: 468
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 378-842
Cow position:
Alignm length: 465
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 396-839
Cow position:
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 132

Conread position: 408-841
Cow position:
Alignm length: 435
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 117

Conread position: 437-842
Cow position:
Alignm length: 420
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 309

Conread position: 445-786
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 452-842
Cow position:
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 75

Conread position: 453-842
Cow position:
Alignm length: 392
Alignm identity: 248
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 42, 70

Conread position: 477-842
Cow position:
Alignm length: 367
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 51

Conread position: 479-840
Cow position:
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 484-833
Cow position:
Alignm length: 352
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 45

Conread position: 486-841
Cow position:
Alignm length: 357
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 41

Conread position: 486-842
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 43, 189

Conread position: 490-841
Cow position:
Alignm length: 360
Alignm identity: 232
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 56, 25

Conread position: 498-842
Cow position:
Alignm length: 348
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 29

Conread position: 501-839
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 26

Conread position: 503-842
Cow position:
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 505-842
Cow position:
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 539-805
Cow position:
Alignm length: 267
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 541-839
Cow position:
Alignm length: 307
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 210

Conread position: 546-841
Cow position:
Alignm length: 296
Alignm identity: 187
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 186, 0

Conread position: 555-841
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 177, 0

Conread position: 557-841
Cow position:
Alignm length: 285
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 178, 0

Conread position: 581-838
Cow position:
Alignm length: 266
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 588-842
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 593-842
Cow position:
Alignm length: 260
Alignm identity: 178
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 144

Conread position: 612-842
Cow position:
Alignm length: 231
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 614-837
Cow position:
Alignm length: 225
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 131, 118

Conread position: 615-841
Cow position:
Alignm length: 227
Alignm identity: 160
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 120, 0

Conread position: 618-842
Cow position:
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 101

Conread position: 621-842
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 194, 54

Conread position: 626-842
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 122, 0

Conread position: 631-835
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 60, 31

Conread position: 640-842
Cow position:
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 111, 0

Conread position: 647-836
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 37, 89

Conread position: 650-842
Cow position:
Alignm length: 193
Alignm identity: 133
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 651-842
Cow position:
Alignm length: 195
Alignm identity: 146
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 32, 100

Conread position: 652-817
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 652-839
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 84

Conread position: 666-839
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 684-842
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 128

Conread position: 689-842
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.