Cow genome map


           Conread name:
           Thy1-THY010085D12
        

               Conread position:
               322-732
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 12
               

               Conread position:
               328-746
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               329-694
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               329-824
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               329-839
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               329-842
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               330-518
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 15
               

               Conread position:
               330-837
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               330-838
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               330-839
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               330-842
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               331-842
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               341-839
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               341-841
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 41
               

               Conread position:
               344-714
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               344-839
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 66
               

               Conread position:
               344-842
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 234
               

               Conread position:
               344-842
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 12
               

               Conread position:
               344-842
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 189
               

               Conread position:
               345-841
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               408, 23
               

               Conread position:
               347-501
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 124
               

               Conread position:
               347-739
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 183
               

               Conread position:
               347-838
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 185
               

               Conread position:
               347-839
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 183
               

               Conread position:
               347-841
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 182
               

               Conread position:
               347-842
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 185
               

               Conread position:
               347-842
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 184
               

               Conread position:
               355-842
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 60
               

               Conread position:
               361-842
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 136
               

               Conread position:
               368-833
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               373-837
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               373-842
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 127
               

               Conread position:
               375-822
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               375-838
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 36
               

               Conread position:
               381-841
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               302, 101
               

               Conread position:
               385-842
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 142
               

               Conread position:
               401-842
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 128
               

               Conread position:
               411-842
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 122
               

               Conread position:
               468-840
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               498-823
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 31
               

               Conread position:
               498-842
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 28
               

               Conread position:
               519-825
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 87
               

               Conread position:
               519-838
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               84, 99
               

               Conread position:
               528-838
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               529-842
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               540-823
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               205
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               545-842
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               551-839
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               61, 125
               

               Conread position:
               576-823
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               576-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               116, 147
               

               Conread position:
               588-841
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               590-822
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               590-842
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               592-840
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               592-842
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               593-842
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               594-837
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               595-842
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               596-823
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               600-814
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               601-842
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               605-840
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 83
               

               Conread position:
               612-842
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               612-842
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               614-823
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               618-841
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               621-841
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               623-839
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               123, 132
               

               Conread position:
               625-823
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               58, 109
               

               Conread position:
               635-839
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               638-838
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               139, 62
               

               Conread position:
               642-842
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               647-842
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               649-839
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               658-841
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               673-837
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               673-842
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 76
               

               Conread position:
               706-840
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.