Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 322-732
Cow position: chr27:11630491-11630091 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 12

Conread position: 328-746
Cow position: chr27:29860117-29860516 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 329-694
Cow position: chr27:28924302-28924660 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 16

Conread position: 329-824
Cow position: chr27:8568983-8569467 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 329-839
Cow position: chr27:9090054-9090547 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 329-842
Cow position: chr27:21283834-21283325 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 330-518
Cow position: chr27:24571022-24570832 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 15

Conread position: 330-837
Cow position: chr27:30677669-30677155 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 330-838
Cow position: chr27:16428072-16428578 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 17

Conread position: 330-839
Cow position: chr27:5423634-5424132 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 330-842
Cow position: chr27:12282107-12282602 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 331-842
Cow position: chr27:30583480-30582988 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 341-839
Cow position: chr27:16551205-16550711 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 76

Conread position: 341-841
Cow position: chr27:26654033-26653557 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 41

Conread position: 344-714
Cow position: chr27:22038065-22038424 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 245
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 53, 76

Conread position: 344-839
Cow position: chr27:8429682-8430173 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 66

Conread position: 344-842
Cow position: chr27:4665215-4664723 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 234

Conread position: 344-842
Cow position: chr27:18943327-18943817 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 12

Conread position: 344-842
Cow position: chr27:27054062-27053572 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 345-841
Cow position: chr27:17476775-17476295 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 408, 23

Conread position: 347-501
Cow position: chr27:3990367-3990208 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 124

Conread position: 347-739
Cow position: chr27:27291826-27292220 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 347-838
Cow position: chr27:22329923-22330405 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 185

Conread position: 347-839
Cow position: chr27:2557560-2557066 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 183

Conread position: 347-841
Cow position: chr27:25784329-25783837 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 182

Conread position: 347-842
Cow position: chr27:344497-344013 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 347-842
Cow position: chr27:12190707-12191198 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 184

Conread position: 355-842
Cow position: chr27:30476801-30476311 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 60

Conread position: 361-842
Cow position: chr27:18740829-18741308 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 136

Conread position: 368-833
Cow position: chr27:30447905-30447440 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 11

Conread position: 373-837
Cow position: chr27:16117701-16117244 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 108

Conread position: 373-842
Cow position: chr27:12277568-12278027 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 127

Conread position: 375-822
Cow position: chr27:30641345-30640908 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 375-838
Cow position: chr27:21451912-21452371 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 36

Conread position: 381-841
Cow position: chr27:23658040-23658481 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 101

Conread position: 385-842
Cow position: chr27:537153-536704 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 142

Conread position: 401-842
Cow position: chr27:30572545-30572980 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 128

Conread position: 411-842
Cow position: chr27:12112040-12112465 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 122

Conread position: 468-840
Cow position: chr27:30561531-30561169 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 498-823
Cow position: chr27:31250264-31250584 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 31

Conread position: 498-842
Cow position: chr27:16984377-16984038 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 28

Conread position: 519-825
Cow position: chr27:24202951-24202651 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 87

Conread position: 519-838
Cow position: chr27:27557947-27558246 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 217
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 84, 99

Conread position: 528-838
Cow position: chr27:19014631-19014935 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 55, 36

Conread position: 529-842
Cow position: chr27:13976842-13977139 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 540-823
Cow position: chr27:21392968-21393237 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 545-842
Cow position: chr27:13638430-13638714 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 161, 0

Conread position: 551-839
Cow position: chr27:795350-795064 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 61, 125

Conread position: 576-823
Cow position: chr27:25471660-25471429 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 576-841
Cow position: chr27:14881381-14881122 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 116, 147

Conread position: 588-841
Cow position: chr27:18205822-18205583 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 97, 38

Conread position: 590-822
Cow position: chr27:23452962-23452745 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 590-842
Cow position: chr27:21578075-21578321 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 592-840
Cow position: chr27:11090697-11090939 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 592-842
Cow position: chr27:8048196-8048436 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 8

Conread position: 593-842
Cow position: chr27:22107767-22108010 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 594-837
Cow position: chr27:26998927-26999169 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 161, 0

Conread position: 595-842
Cow position: chr27:24445669-24445905 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 94, 0

Conread position: 596-823
Cow position: chr27:1675872-1675640 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 135, 0

Conread position: 600-814
Cow position: chr27:7094907-7094699 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 143
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 601-842
Cow position: chr27:17645714-17645947 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 74, 0

Conread position: 605-840
Cow position: chr27:28106655-28106884 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 83

Conread position: 612-842
Cow position: chr27:15632870-15632648 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 32

Conread position: 612-842
Cow position: chr27:27737459-27737682 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 18

Conread position: 614-823
Cow position: chr27:6523528-6523325 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 136, 0

Conread position: 618-841
Cow position: chr27:9337977-9337765 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 165
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 117, 0

Conread position: 621-841
Cow position: chr27:15201195-15200978 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 171
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 18, 114

Conread position: 623-839
Cow position: chr27:26223802-26224015 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 123, 132

Conread position: 625-823
Cow position: chr27:465388-465191 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 58, 109

Conread position: 635-839
Cow position: chr27:2639563-2639760 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 37, 0

Conread position: 638-838
Cow position: chr27:22394627-22394424 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 139, 62

Conread position: 642-842
Cow position: chr27:25277606-25277416 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 647-842
Cow position: chr27:2401840-2401651 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 649-839
Cow position: chr27:2848354-2848169 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 658-841
Cow position: chr27:9169248-9169426 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 673-837
Cow position: chr27:30814871-30814710 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 673-842
Cow position: chr27:8231429-8231261 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 21, 76

Conread position: 706-840
Cow position: chr27:19647272-19647408 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 35, 0

Show alignments to all cow chromosomes.