Cow genome map
Conread name: | Thy1-THY010085D12 |
Conread position: | 322-732 |
Cow position: | chr27:11630491-11630091 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 12 |
Conread position: | 328-746 |
Cow position: | chr27:29860117-29860516 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 17 |
Conread position: | 329-694 |
Cow position: | chr27:28924302-28924660 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 16 |
Conread position: | 329-824 |
Cow position: | chr27:8568983-8569467 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 329-839 |
Cow position: | chr27:9090054-9090547 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 16 |
Conread position: | 329-842 |
Cow position: | chr27:21283834-21283325 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 330-518 |
Cow position: | chr27:24571022-24570832 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 146 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 58, 15 |
Conread position: | 330-837 |
Cow position: | chr27:30677669-30677155 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 330-838 |
Cow position: | chr27:16428072-16428578 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 17 |
Conread position: | 330-839 |
Cow position: | chr27:5423634-5424132 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 16 |
Conread position: | 330-842 |
Cow position: | chr27:12282107-12282602 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 15 |
Conread position: | 331-842 |
Cow position: | chr27:30583480-30582988 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 341-839 |
Cow position: | chr27:16551205-16550711 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 76 |
Conread position: | 341-841 |
Cow position: | chr27:26654033-26653557 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 41 |
Conread position: | 344-714 |
Cow position: | chr27:22038065-22038424 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 245 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 53, 76 |
Conread position: | 344-839 |
Cow position: | chr27:8429682-8430173 (view UCSC Genome Browser custom track) |
Alignm length: | 502 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 66 |
Conread position: | 344-842 |
Cow position: | chr27:4665215-4664723 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 234 |
Conread position: | 344-842 |
Cow position: | chr27:18943327-18943817 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 203, 12 |
Conread position: | 344-842 |
Cow position: | chr27:27054062-27053572 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 189 |
Conread position: | 345-841 |
Cow position: | chr27:17476775-17476295 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 408, 23 |
Conread position: | 347-501 |
Cow position: | chr27:3990367-3990208 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 121 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 36, 124 |
Conread position: | 347-739 |
Cow position: | chr27:27291826-27292220 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 183 |
Conread position: | 347-838 |
Cow position: | chr27:22329923-22330405 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 185 |
Conread position: | 347-839 |
Cow position: | chr27:2557560-2557066 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 183 |
Conread position: | 347-841 |
Cow position: | chr27:25784329-25783837 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 182 |
Conread position: | 347-842 |
Cow position: | chr27:344497-344013 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 185 |
Conread position: | 347-842 |
Cow position: | chr27:12190707-12191198 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 184 |
Conread position: | 355-842 |
Cow position: | chr27:30476801-30476311 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 181, 60 |
Conread position: | 361-842 |
Cow position: | chr27:18740829-18741308 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 136 |
Conread position: | 368-833 |
Cow position: | chr27:30447905-30447440 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 153, 11 |
Conread position: | 373-837 |
Cow position: | chr27:16117701-16117244 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 108 |
Conread position: | 373-842 |
Cow position: | chr27:12277568-12278027 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 127 |
Conread position: | 375-822 |
Cow position: | chr27:30641345-30640908 (view UCSC Genome Browser custom track) |
Alignm length: | 448 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 375-838 |
Cow position: | chr27:21451912-21452371 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 310, 36 |
Conread position: | 381-841 |
Cow position: | chr27:23658040-23658481 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 302, 101 |
Conread position: | 385-842 |
Cow position: | chr27:537153-536704 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 304, 142 |
Conread position: | 401-842 |
Cow position: | chr27:30572545-30572980 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 128 |
Conread position: | 411-842 |
Cow position: | chr27:12112040-12112465 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 122 |
Conread position: | 468-840 |
Cow position: | chr27:30561531-30561169 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 498-823 |
Cow position: | chr27:31250264-31250584 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 31 |
Conread position: | 498-842 |
Cow position: | chr27:16984377-16984038 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 28 |
Conread position: | 519-825 |
Cow position: | chr27:24202951-24202651 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 87 |
Conread position: | 519-838 |
Cow position: | chr27:27557947-27558246 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 217 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 84, 99 |
Conread position: | 528-838 |
Cow position: | chr27:19014631-19014935 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 214 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 55, 36 |
Conread position: | 529-842 |
Cow position: | chr27:13976842-13977139 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 540-823 |
Cow position: | chr27:21392968-21393237 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 205 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 545-842 |
Cow position: | chr27:13638430-13638714 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 206 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 161, 0 |
Conread position: | 551-839 |
Cow position: | chr27:795350-795064 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 208 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 61, 125 |
Conread position: | 576-823 |
Cow position: | chr27:25471660-25471429 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 174 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 576-841 |
Cow position: | chr27:14881381-14881122 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 194 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 116, 147 |
Conread position: | 588-841 |
Cow position: | chr27:18205822-18205583 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 182 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 97, 38 |
Conread position: | 590-822 |
Cow position: | chr27:23452962-23452745 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 174 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 590-842 |
Cow position: | chr27:21578075-21578321 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 592-840 |
Cow position: | chr27:11090697-11090939 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 179 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 592-842 |
Cow position: | chr27:8048196-8048436 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 186 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 25, 8 |
Conread position: | 593-842 |
Cow position: | chr27:22107767-22108010 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 594-837 |
Cow position: | chr27:26998927-26999169 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 165 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 161, 0 |
Conread position: | 595-842 |
Cow position: | chr27:24445669-24445905 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 187 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 596-823 |
Cow position: | chr27:1675872-1675640 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 159 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 600-814 |
Cow position: | chr27:7094907-7094699 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 143 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 143, 0 |
Conread position: | 601-842 |
Cow position: | chr27:17645714-17645947 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 175 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 605-840 |
Cow position: | chr27:28106655-28106884 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 83 |
Conread position: | 612-842 |
Cow position: | chr27:15632870-15632648 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 10, 32 |
Conread position: | 612-842 |
Cow position: | chr27:27737459-27737682 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 170 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 52, 18 |
Conread position: | 614-823 |
Cow position: | chr27:6523528-6523325 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 136, 0 |
Conread position: | 618-841 |
Cow position: | chr27:9337977-9337765 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 165 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 621-841 |
Cow position: | chr27:15201195-15200978 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 171 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 18, 114 |
Conread position: | 623-839 |
Cow position: | chr27:26223802-26224015 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 167 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 123, 132 |
Conread position: | 625-823 |
Cow position: | chr27:465388-465191 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 153 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 58, 109 |
Conread position: | 635-839 |
Cow position: | chr27:2639563-2639760 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 157 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 638-838 |
Cow position: | chr27:22394627-22394424 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 150 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 139, 62 |
Conread position: | 642-842 |
Cow position: | chr27:25277606-25277416 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 147 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 647-842 |
Cow position: | chr27:2401840-2401651 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 134 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 649-839 |
Cow position: | chr27:2848354-2848169 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 146 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 658-841 |
Cow position: | chr27:9169248-9169426 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 133 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 673-837 |
Cow position: | chr27:30814871-30814710 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 673-842 |
Cow position: | chr27:8231429-8231261 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 21, 76 |
Conread position: | 706-840 |
Cow position: | chr27:19647272-19647408 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 110 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Show alignments to all cow chromosomes.