Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 272-837
Cow position:
Alignm length: 576
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 325-842
Cow position:
Alignm length: 524
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 16

Conread position: 329-492
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 155, 16

Conread position: 329-726
Cow position:
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 18

Conread position: 329-791
Cow position:
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 329-822
Cow position:
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 18

Conread position: 329-841
Cow position:
Alignm length: 517
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 12

Conread position: 329-842
Cow position:
Alignm length: 516
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 16

Conread position: 329-842
Cow position:
Alignm length: 516
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 329-842
Cow position:
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 16

Conread position: 329-842
Cow position:
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 329-842
Cow position:
Alignm length: 531
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 329-842
Cow position:
Alignm length: 522
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 16

Conread position: 330-507
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 15

Conread position: 330-572
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 55, 15

Conread position: 330-614
Cow position:
Alignm length: 289
Alignm identity: 212
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 15

Conread position: 330-837
Cow position:
Alignm length: 514
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 101

Conread position: 330-838
Cow position:
Alignm length: 518
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 15

Conread position: 330-838
Cow position:
Alignm length: 518
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 15

Conread position: 330-842
Cow position:
Alignm length: 530
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 15

Conread position: 330-842
Cow position:
Alignm length: 530
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 15

Conread position: 330-842
Cow position:
Alignm length: 518
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 330-842
Cow position:
Alignm length: 520
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 15

Conread position: 331-838
Cow position:
Alignm length: 523
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 14

Conread position: 331-842
Cow position:
Alignm length: 530
Alignm identity: 348
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 56, 10

Conread position: 334-500
Cow position:
Alignm length: 170
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 52, 9

Conread position: 334-510
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 11

Conread position: 334-623
Cow position:
Alignm length: 296
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 55, 11

Conread position: 334-820
Cow position:
Alignm length: 492
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 11

Conread position: 334-822
Cow position:
Alignm length: 497
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 11

Conread position: 335-841
Cow position:
Alignm length: 508
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 10

Conread position: 335-842
Cow position:
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 10

Conread position: 335-842
Cow position:
Alignm length: 520
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 200

Conread position: 341-839
Cow position:
Alignm length: 502
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 32

Conread position: 344-637
Cow position:
Alignm length: 297
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 19

Conread position: 344-840
Cow position:
Alignm length: 516
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 19

Conread position: 345-823
Cow position:
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 69

Conread position: 346-568
Cow position:
Alignm length: 225
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 119

Conread position: 346-841
Cow position:
Alignm length: 513
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 109

Conread position: 347-754
Cow position:
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 54

Conread position: 347-836
Cow position:
Alignm length: 516
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 201

Conread position: 347-838
Cow position:
Alignm length: 498
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 125

Conread position: 347-840
Cow position:
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 75

Conread position: 347-840
Cow position:
Alignm length: 495
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 181

Conread position: 347-841
Cow position:
Alignm length: 500
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 347-842
Cow position:
Alignm length: 504
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 126

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 185

Conread position: 348-840
Cow position:
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-842
Cow position:
Alignm length: 499
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 349-740
Cow position:
Alignm length: 392
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 349-841
Cow position:
Alignm length: 498
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 180

Conread position: 352-837
Cow position:
Alignm length: 490
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 179

Conread position: 374-842
Cow position:
Alignm length: 470
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 384-842
Cow position:
Alignm length: 461
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 25

Conread position: 385-841
Cow position:
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 140

Conread position: 395-838
Cow position:
Alignm length: 446
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 134

Conread position: 398-831
Cow position:
Alignm length: 437
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 18

Conread position: 434-842
Cow position:
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 95

Conread position: 447-822
Cow position:
Alignm length: 383
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 68

Conread position: 448-842
Cow position:
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 81

Conread position: 454-841
Cow position:
Alignm length: 388
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 456-842
Cow position:
Alignm length: 387
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 462-807
Cow position:
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 480-842
Cow position:
Alignm length: 363
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 485-801
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 498-842
Cow position:
Alignm length: 345
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 498-842
Cow position:
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 30

Conread position: 498-842
Cow position:
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 29

Conread position: 501-788
Cow position:
Alignm length: 296
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 212, 26

Conread position: 501-837
Cow position:
Alignm length: 339
Alignm identity: 211
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 187, 34

Conread position: 509-842
Cow position:
Alignm length: 334
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 528-839
Cow position:
Alignm length: 320
Alignm identity: 208
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 39, 110

Conread position: 532-842
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 161, 207

Conread position: 535-838
Cow position:
Alignm length: 304
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 0

Conread position: 536-842
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 64

Conread position: 551-840
Cow position:
Alignm length: 293
Alignm identity: 199
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 66, 49

Conread position: 564-842
Cow position:
Alignm length: 281
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 188

Conread position: 576-841
Cow position:
Alignm length: 266
Alignm identity: 188
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 156, 0

Conread position: 577-842
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 158, 27

Conread position: 579-838
Cow position:
Alignm length: 260
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 0

Conread position: 587-842
Cow position:
Alignm length: 256
Alignm identity: 170
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 590-842
Cow position:
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 30, 0

Conread position: 600-838
Cow position:
Alignm length: 242
Alignm identity: 166
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 129, 63

Conread position: 611-841
Cow position:
Alignm length: 231
Alignm identity: 170
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 617-842
Cow position:
Alignm length: 227
Alignm identity: 164
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 161, 118

Conread position: 620-841
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 49

Conread position: 622-838
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 130

Conread position: 622-838
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 203, 35

Conread position: 624-842
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 76, 0

Conread position: 627-842
Cow position:
Alignm length: 216
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 121, 0

Conread position: 632-841
Cow position:
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 103, 0

Conread position: 637-787
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 32

Conread position: 643-826
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 653-820
Cow position:
Alignm length: 168
Alignm identity: 137
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 16, 0

Conread position: 653-842
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 141, 19

Conread position: 658-842
Cow position:
Alignm length: 185
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 661-842
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 166, 74

Conread position: 672-840
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 63

Conread position: 675-839
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 706-842
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 740-841
Cow position:
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Show alignments to all cow chromosomes.