Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 325-842
Cow position: chr4:68795854-68796358 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 9

Conread position: 326-822
Cow position: chr4:962444-961972 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 328-649
Cow position: chr4:49031840-49032155 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 23, 17

Conread position: 328-669
Cow position: chr4:61400199-61399867 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 6

Conread position: 328-842
Cow position: chr4:9649224-9649725 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 17

Conread position: 329-838
Cow position: chr4:6631154-6630651 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 18

Conread position: 329-838
Cow position: chr4:21364400-21364909 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 12

Conread position: 329-840
Cow position: chr4:489290-488792 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 329-842
Cow position: chr4:3474823-3475316 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 330-493
Cow position: chr4:10838192-10838026 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 15

Conread position: 330-698
Cow position: chr4:65416028-65415687 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 76, 15

Conread position: 330-820
Cow position: chr4:46492092-46492577 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 18

Conread position: 330-822
Cow position: chr4:1352838-1352356 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 330-823
Cow position: chr4:16832397-16831909 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-823
Cow position: chr4:33399319-33398812 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 22

Conread position: 330-836
Cow position: chr4:49740684-49741176 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 15

Conread position: 330-837
Cow position: chr4:33645345-33644850 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 11

Conread position: 330-838
Cow position: chr4:20789939-20790440 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 11

Conread position: 330-839
Cow position: chr4:10044614-10044116 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 330-839
Cow position: chr4:11390382-11389884 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 330-839
Cow position: chr4:42639143-42638659 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 330-840
Cow position: chr4:51014229-51014728 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 330-842
Cow position: chr4:25972087-25972597 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 330-842
Cow position: chr4:36754937-36755421 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 330-842
Cow position: chr4:38180907-38181391 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 17

Conread position: 330-842
Cow position: chr4:51122191-51122699 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 15

Conread position: 330-842
Cow position: chr4:66128116-66127607 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 22

Conread position: 332-739
Cow position: chr4:37786454-37786864 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 334-656
Cow position: chr4:65816503-65816192 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 334-687
Cow position: chr4:11193114-11193461 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 223

Conread position: 334-839
Cow position: chr4:37703473-37703961 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 334-842
Cow position: chr4:2601361-2601856 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 11

Conread position: 334-842
Cow position: chr4:16967145-16966664 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 11

Conread position: 335-691
Cow position: chr4:26548626-26548979 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 335-741
Cow position: chr4:19264825-19265223 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 38

Conread position: 335-839
Cow position: chr4:31349010-31348516 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 153

Conread position: 335-842
Cow position: chr4:54147271-54146790 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 10

Conread position: 336-522
Cow position: chr4:50977915-50978097 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 336-751
Cow position: chr4:33181127-33180722 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 9

Conread position: 336-791
Cow position: chr4:60625379-60624936 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 337-842
Cow position: chr4:34223101-34223590 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 5

Conread position: 339-838
Cow position: chr4:34181596-34181109 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 43

Conread position: 341-791
Cow position: chr4:32770753-32770292 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 35

Conread position: 342-839
Cow position: chr4:3129017-3129515 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 192

Conread position: 343-822
Cow position: chr4:26911921-26912409 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 37

Conread position: 344-520
Cow position: chr4:10093169-10093343 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 344-836
Cow position: chr4:37955977-37955502 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 344-842
Cow position: chr4:40415435-40414933 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 187

Conread position: 344-842
Cow position: chr4:59889393-59888904 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 72

Conread position: 345-839
Cow position: chr4:68362156-68362635 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 43

Conread position: 347-547
Cow position: chr4:36891848-36892050 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 161
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 39, 180

Conread position: 347-548
Cow position: chr4:30573127-30573331 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 43, 183

Conread position: 347-552
Cow position: chr4:25352414-25352223 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 115, 0

Conread position: 347-579
Cow position: chr4:30508367-30508603 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 145

Conread position: 347-625
Cow position: chr4:45235628-45235349 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 37, 183

Conread position: 347-694
Cow position: chr4:5284672-5284318 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 185

Conread position: 347-740
Cow position: chr4:61242448-61242834 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 67

Conread position: 347-760
Cow position: chr4:41097140-41097543 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 385, 179

Conread position: 347-838
Cow position: chr4:17067944-17067446 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 184

Conread position: 347-838
Cow position: chr4:54695863-54695384 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 181

Conread position: 347-840
Cow position: chr4:23150490-23150005 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 347-842
Cow position: chr4:11872681-11872214 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 347-842
Cow position: chr4:27287938-27287448 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 347-842
Cow position: chr4:28150741-28151229 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 24

Conread position: 347-842
Cow position: chr4:49744840-49745326 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 183

Conread position: 348-832
Cow position: chr4:54494055-54494529 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 122

Conread position: 348-838
Cow position: chr4:3892938-3893424 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 187

Conread position: 348-839
Cow position: chr4:6445930-6446409 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-841
Cow position: chr4:18738574-18738089 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-841
Cow position: chr4:24140045-24140540 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 350-745
Cow position: chr4:49828399-49828779 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 252
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 67, 42

Conread position: 350-748
Cow position: chr4:22817750-22818148 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 207, 61

Conread position: 351-839
Cow position: chr4:50760903-50760421 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 112

Conread position: 355-838
Cow position: chr4:47087858-47087391 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 355-840
Cow position: chr4:3849781-3850253 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 64

Conread position: 366-842
Cow position: chr4:27186336-27185874 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 366-842
Cow position: chr4:27533615-27533147 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 76

Conread position: 371-842
Cow position: chr4:34340580-34340122 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 374-839
Cow position: chr4:44901461-44901918 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 158

Conread position: 375-842
Cow position: chr4:58833966-58833509 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 381-842
Cow position: chr4:65539328-65538877 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 25

Conread position: 394-842
Cow position: chr4:9844870-9845301 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 394-842
Cow position: chr4:30959782-30960219 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 395-842
Cow position: chr4:39645955-39646398 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 152

Conread position: 396-815
Cow position: chr4:13959054-13959459 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 398-842
Cow position: chr4:23853465-23853901 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 0

Conread position: 399-842
Cow position: chr4:26540487-26540938 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 70

Conread position: 402-838
Cow position: chr4:21073909-21073477 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 128

Conread position: 420-842
Cow position: chr4:36812675-36813088 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 48

Conread position: 427-823
Cow position: chr4:30220380-30220001 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 100

Conread position: 428-835
Cow position: chr4:24134181-24133779 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 285
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 109

Conread position: 439-840
Cow position: chr4:10017268-10016886 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 441-776
Cow position: chr4:25734792-25735119 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 48

Conread position: 441-841
Cow position: chr4:43370533-43370153 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 72

Conread position: 449-838
Cow position: chr4:58835084-58834705 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 0

Conread position: 463-842
Cow position: chr4:13877525-13877897 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 61

Conread position: 471-823
Cow position: chr4:64073008-64072669 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 471-841
Cow position: chr4:40576571-40576209 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 21

Conread position: 477-839
Cow position: chr4:3132612-3132978 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 238

Conread position: 477-842
Cow position: chr4:7560174-7559819 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 17

Conread position: 477-842
Cow position: chr4:21162033-21162392 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 50

Conread position: 477-842
Cow position: chr4:46862238-46861878 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 50

Conread position: 478-832
Cow position: chr4:17175521-17175871 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 53

Conread position: 481-840
Cow position: chr4:10838002-10837665 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 48

Conread position: 484-840
Cow position: chr4:66918245-66918592 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 484-841
Cow position: chr4:24414596-24414950 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 266

Conread position: 485-842
Cow position: chr4:14813161-14812826 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 486-841
Cow position: chr4:5979438-5979094 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 41

Conread position: 489-842
Cow position: chr4:44196048-44196387 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 40

Conread position: 496-838
Cow position: chr4:12017925-12018255 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 8

Conread position: 498-842
Cow position: chr4:58948606-58948254 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 29

Conread position: 499-839
Cow position: chr4:29035287-29035613 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 28

Conread position: 500-822
Cow position: chr4:59784720-59785034 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 183, 237

Conread position: 505-832
Cow position: chr4:43761957-43762277 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 22

Conread position: 508-822
Cow position: chr4:6443699-6443399 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 21

Conread position: 509-839
Cow position: chr4:7093702-7093399 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 89, 18

Conread position: 509-840
Cow position: chr4:59106528-59106194 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 529-831
Cow position: chr4:37828436-37828131 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 95, 223

Conread position: 529-837
Cow position: chr4:27755915-27755612 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 0

Conread position: 535-842
Cow position: chr4:2609641-2609940 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 536-842
Cow position: chr4:5796932-5797229 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 69

Conread position: 539-822
Cow position: chr4:44645822-44645544 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 0

Conread position: 540-839
Cow position: chr4:6414121-6414405 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 541-842
Cow position: chr4:50978655-50978948 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 284, 141

Conread position: 544-841
Cow position: chr4:22023734-22023445 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 545-842
Cow position: chr4:59870906-59871203 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 9, 40

Conread position: 547-841
Cow position: chr4:58818897-58818606 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 19

Conread position: 551-832
Cow position: chr4:61171378-61171652 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 34

Conread position: 552-823
Cow position: chr4:4736383-4736646 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 198
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 40, 52

Conread position: 553-842
Cow position: chr4:56177231-56177514 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 20, 13

Conread position: 555-840
Cow position: chr4:10968942-10968666 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 210
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 26

Conread position: 557-842
Cow position: chr4:27560474-27560754 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 0

Conread position: 558-842
Cow position: chr4:66173364-66173096 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 264, 121

Conread position: 561-842
Cow position: chr4:39009392-39009667 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 16, 41

Conread position: 566-842
Cow position: chr4:25579510-25579779 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 88

Conread position: 570-838
Cow position: chr4:8068271-8068534 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 129

Conread position: 571-839
Cow position: chr4:25369546-25369814 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 184

Conread position: 576-841
Cow position: chr4:37878870-37879136 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 114

Conread position: 578-841
Cow position: chr4:28378206-28377948 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 588-832
Cow position: chr4:19206846-19207077 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 588-838
Cow position: chr4:46068746-46068998 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 139, 81

Conread position: 590-842
Cow position: chr4:46549545-46549786 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 96, 0

Conread position: 590-842
Cow position: chr4:49794139-49794379 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 194
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 209, 101

Conread position: 590-842
Cow position: chr4:66548333-66548086 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 79, 23

Conread position: 593-822
Cow position: chr4:45398191-45398411 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 593-838
Cow position: chr4:65826408-65826172 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 112, 143

Conread position: 593-842
Cow position: chr4:43752620-43752870 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 90

Conread position: 595-842
Cow position: chr4:22250275-22250048 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 93, 0

Conread position: 596-842
Cow position: chr4:19558185-19558425 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 109, 92

Conread position: 600-823
Cow position: chr4:46668051-46668264 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 62

Conread position: 601-842
Cow position: chr4:53125599-53125835 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 177
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 0

Conread position: 604-842
Cow position: chr4:38799731-38799494 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 605-841
Cow position: chr4:33564346-33564569 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 609-817
Cow position: chr4:3439867-3440068 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 609-839
Cow position: chr4:41441042-41441260 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 611-818
Cow position: chr4:61272157-61271955 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 133, 0

Conread position: 611-840
Cow position: chr4:13920647-13920423 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 212, 132

Conread position: 611-842
Cow position: chr4:48499303-48499530 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 613-842
Cow position: chr4:56409646-56409880 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 149

Conread position: 615-842
Cow position: chr4:21832423-21832203 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 618-840
Cow position: chr4:59884799-59884585 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 205, 6

Conread position: 620-822
Cow position: chr4:24198314-24198115 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 63, 129

Conread position: 623-838
Cow position: chr4:5495485-5495694 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 89, 0

Conread position: 623-839
Cow position: chr4:31772958-31773166 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 40, 0

Conread position: 628-791
Cow position: chr4:33030007-33030164 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 628-839
Cow position: chr4:22861427-22861222 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 629-842
Cow position: chr4:33090257-33090049 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 25, 44

Conread position: 631-839
Cow position: chr4:45115136-45114931 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 132, 94

Conread position: 632-842
Cow position: chr4:61191017-61190821 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 632-842
Cow position: chr4:65206965-65206760 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 52, 103

Conread position: 635-842
Cow position: chr4:19584199-19584402 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 107

Conread position: 636-840
Cow position: chr4:37620390-37620191 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 637-842
Cow position: chr4:57555463-57555664 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 642-842
Cow position: chr4:28094972-28094779 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 645-791
Cow position: chr4:834991-834856 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 647-842
Cow position: chr4:22115107-22115285 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 178, 38

Conread position: 647-842
Cow position: chr4:58857224-58857036 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 88, 0

Conread position: 648-842
Cow position: chr4:19316477-19316281 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 90

Conread position: 653-842
Cow position: chr4:1034557-1034745 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 172, 82

Conread position: 657-842
Cow position: chr4:41301491-41301302 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 658-841
Cow position: chr4:45235348-45235169 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 63, 76

Conread position: 675-825
Cow position: chr4:47251780-47251635 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 691-842
Cow position: chr4:23382249-23382103 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 54

Conread position: 692-842
Cow position: chr4:48283388-48283533 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 130, 51

Show alignments to all cow chromosomes.