Cow genome map
Conread name: | Thy1-THY010085D12 |
Conread position: | 319-491 |
Cow position: | chr5:40270602-40270433 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 320-841 |
Cow position: | chr5:43003996-43004509 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 25 |
Conread position: | 328-501 |
Cow position: | chr5:23845301-23845127 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 60, 17 |
Conread position: | 328-547 |
Cow position: | chr5:29558846-29559060 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 170 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 328-842 |
Cow position: | chr5:72007642-72007145 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 17 |
Conread position: | 329-494 |
Cow position: | chr5:33064698-33064535 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 127 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 74, 14 |
Conread position: | 329-495 |
Cow position: | chr5:35446378-35446218 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 329-575 |
Cow position: | chr5:25920535-25920295 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 186 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 329-791 |
Cow position: | chr5:27656111-27656566 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 16 |
Conread position: | 329-838 |
Cow position: | chr5:25930641-25930159 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 5 |
Conread position: | 329-839 |
Cow position: | chr5:34669837-34669342 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 16 |
Conread position: | 329-840 |
Cow position: | chr5:46295433-46294938 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 199 |
Conread position: | 329-842 |
Cow position: | chr5:34192172-34192685 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 16 |
Conread position: | 329-842 |
Cow position: | chr5:40928774-40928272 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 19 |
Conread position: | 329-842 |
Cow position: | chr5:51502136-51502629 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 386 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 475, 16 |
Conread position: | 330-525 |
Cow position: | chr5:15855979-15855786 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 147 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 330-532 |
Cow position: | chr5:45941745-45941539 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 156 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 52, 15 |
Conread position: | 330-657 |
Cow position: | chr5:22857380-22857046 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 242 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 56, 15 |
Conread position: | 330-693 |
Cow position: | chr5:23648177-23647818 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 351, 15 |
Conread position: | 330-732 |
Cow position: | chr5:3551455-3551070 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 330-788 |
Cow position: | chr5:48405769-48405319 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 15 |
Conread position: | 330-823 |
Cow position: | chr5:11956250-11955776 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 86 |
Conread position: | 330-838 |
Cow position: | chr5:27491230-27491729 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 15 |
Conread position: | 330-838 |
Cow position: | chr5:70249385-70249882 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 379 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 15 |
Conread position: | 330-839 |
Cow position: | chr5:53753330-53752818 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 15 |
Conread position: | 330-842 |
Cow position: | chr5:17027318-17027829 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 15 |
Conread position: | 330-842 |
Cow position: | chr5:36406409-36406908 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 396 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 15 |
Conread position: | 330-842 |
Cow position: | chr5:39448294-39447804 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 15 |
Conread position: | 330-842 |
Cow position: | chr5:72172255-72172766 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 15 |
Conread position: | 331-842 |
Cow position: | chr5:9676372-9675863 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 417, 14 |
Conread position: | 332-807 |
Cow position: | chr5:41228788-41228325 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 13 |
Conread position: | 333-838 |
Cow position: | chr5:44379696-44380202 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 12 |
Conread position: | 334-534 |
Cow position: | chr5:29122771-29122573 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 160 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 53, 11 |
Conread position: | 335-839 |
Cow position: | chr5:59304041-59303540 (view UCSC Genome Browser custom track) |
Alignm length: | 515 |
Alignm identity: | 368 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 10 |
Conread position: | 335-841 |
Cow position: | chr5:54088970-54089440 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 335-842 |
Cow position: | chr5:30275941-30276426 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 138 |
Conread position: | 335-842 |
Cow position: | chr5:31560511-31560987 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 10 |
Conread position: | 335-842 |
Cow position: | chr5:37758583-37758073 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 388 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 195 |
Conread position: | 336-766 |
Cow position: | chr5:59771305-59771729 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 165 |
Conread position: | 337-842 |
Cow position: | chr5:23641767-23641254 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 395 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 8 |
Conread position: | 338-839 |
Cow position: | chr5:27046166-27046660 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 196 |
Conread position: | 342-839 |
Cow position: | chr5:29255952-29255461 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 192 |
Conread position: | 342-839 |
Cow position: | chr5:31285119-31285610 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 192 |
Conread position: | 343-838 |
Cow position: | chr5:7808610-7808113 (view UCSC Genome Browser custom track) |
Alignm length: | 507 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 335, 13 |
Conread position: | 344-452 |
Cow position: | chr5:32810764-32810652 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 92 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 344-733 |
Cow position: | chr5:40357694-40357313 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 319, 38 |
Conread position: | 344-773 |
Cow position: | chr5:14781673-14781257 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 344-786 |
Cow position: | chr5:50205852-50206291 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 119 |
Conread position: | 345-842 |
Cow position: | chr5:6287080-6286612 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 47 |
Conread position: | 345-842 |
Cow position: | chr5:19969775-19969301 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 168, 64 |
Conread position: | 347-470 |
Cow position: | chr5:47855096-47855222 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 106 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 347-561 |
Cow position: | chr5:5787061-5786844 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 159 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 47, 126 |
Conread position: | 347-755 |
Cow position: | chr5:49117082-49116671 (view UCSC Genome Browser custom track) |
Alignm length: | 416 |
Alignm identity: | 303 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 183 |
Conread position: | 347-823 |
Cow position: | chr5:31217362-31217821 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 50 |
Conread position: | 347-832 |
Cow position: | chr5:43991551-43992013 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 46 |
Conread position: | 347-839 |
Cow position: | chr5:49221230-49220744 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 185 |
Conread position: | 347-842 |
Cow position: | chr5:50599326-50599797 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 184 |
Conread position: | 348-838 |
Cow position: | chr5:35762560-35763017 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 41 |
Conread position: | 348-839 |
Cow position: | chr5:49429063-49428563 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 138 |
Conread position: | 348-841 |
Cow position: | chr5:68273579-68273094 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 184 |
Conread position: | 348-842 |
Cow position: | chr5:14904809-14904325 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 222, 68 |
Conread position: | 348-842 |
Cow position: | chr5:74462781-74462298 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 174, 41 |
Conread position: | 349-823 |
Cow position: | chr5:62159648-62159171 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 42 |
Conread position: | 350-838 |
Cow position: | chr5:4199361-4198883 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 260, 58 |
Conread position: | 357-842 |
Cow position: | chr5:19130822-19131278 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 60 |
Conread position: | 357-842 |
Cow position: | chr5:48828402-48828878 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 96 |
Conread position: | 361-842 |
Cow position: | chr5:23006829-23006382 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 412, 20 |
Conread position: | 375-842 |
Cow position: | chr5:48574499-48574043 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 154 |
Conread position: | 378-841 |
Cow position: | chr5:32316025-32315555 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 155 |
Conread position: | 380-842 |
Cow position: | chr5:8421272-8420827 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 381-840 |
Cow position: | chr5:14833325-14832875 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 48 |
Conread position: | 381-842 |
Cow position: | chr5:69771457-69771914 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 147 |
Conread position: | 382-823 |
Cow position: | chr5:1493163-1492725 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 315 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 11 |
Conread position: | 382-842 |
Cow position: | chr5:5812801-5812353 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 0 |
Conread position: | 387-842 |
Cow position: | chr5:35967496-35967938 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 389-842 |
Cow position: | chr5:24643512-24643084 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 140 |
Conread position: | 389-842 |
Cow position: | chr5:46235518-46235075 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 137 |
Conread position: | 395-837 |
Cow position: | chr5:72901849-72902284 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 386, 26 |
Conread position: | 398-814 |
Cow position: | chr5:72041505-72041915 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 398-840 |
Cow position: | chr5:39243042-39242619 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 183, 49 |
Conread position: | 399-842 |
Cow position: | chr5:42918914-42918474 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 286 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 71, 133 |
Conread position: | 403-842 |
Cow position: | chr5:13045459-13045041 (view UCSC Genome Browser custom track) |
Alignm length: | 447 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 34 |
Conread position: | 408-840 |
Cow position: | chr5:21943684-21944110 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 120 |
Conread position: | 408-841 |
Cow position: | chr5:10790410-10789972 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 122 |
Conread position: | 410-817 |
Cow position: | chr5:46104623-46104234 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 410-842 |
Cow position: | chr5:30816024-30816446 (view UCSC Genome Browser custom track) |
Alignm length: | 435 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 236, 117 |
Conread position: | 423-822 |
Cow position: | chr5:12558068-12557691 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 31 |
Conread position: | 431-839 |
Cow position: | chr5:54110566-54110969 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 270, 85 |
Conread position: | 436-842 |
Cow position: | chr5:14313852-14314253 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 223, 93 |
Conread position: | 437-836 |
Cow position: | chr5:4630450-4630851 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 53 |
Conread position: | 442-842 |
Cow position: | chr5:24837696-24837309 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 86 |
Conread position: | 444-841 |
Cow position: | chr5:57584361-57584753 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 86 |
Conread position: | 458-842 |
Cow position: | chr5:20780097-20779719 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 41 |
Conread position: | 485-807 |
Cow position: | chr5:61101638-61101952 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 205 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 485-842 |
Cow position: | chr5:40896718-40896380 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 248 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 128, 0 |
Conread position: | 486-842 |
Cow position: | chr5:41608706-41609045 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 247 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 283, 29 |
Conread position: | 489-841 |
Cow position: | chr5:42232320-42231977 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 228 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 490-842 |
Cow position: | chr5:26045685-26046030 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 498-822 |
Cow position: | chr5:47718923-47719229 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 25 |
Conread position: | 498-842 |
Cow position: | chr5:51293333-51293000 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 500-842 |
Cow position: | chr5:46023780-46023447 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 500-842 |
Cow position: | chr5:46080858-46080525 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 500-842 |
Cow position: | chr5:46130382-46130049 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 243 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 515-841 |
Cow position: | chr5:32307798-32307486 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 219 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 516-842 |
Cow position: | chr5:46611676-46611353 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 11 |
Conread position: | 525-841 |
Cow position: | chr5:18573589-18573900 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 214 |
Conread position: | 526-842 |
Cow position: | chr5:45941208-45940882 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 240 |
Conread position: | 535-839 |
Cow position: | chr5:34232164-34232457 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 537-841 |
Cow position: | chr5:54556636-54556935 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 217 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 50, 43 |
Conread position: | 540-838 |
Cow position: | chr5:34115079-34115375 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 198 |
Conread position: | 541-823 |
Cow position: | chr5:3439873-3439596 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 216 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 0 |
Conread position: | 545-839 |
Cow position: | chr5:31661719-31661437 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 546-842 |
Cow position: | chr5:29750574-29750862 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 55 |
Conread position: | 547-842 |
Cow position: | chr5:32378316-32378603 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 203 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 75, 118 |
Conread position: | 548-842 |
Cow position: | chr5:29559784-29560068 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 213 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 551-839 |
Cow position: | chr5:38286546-38286828 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 193 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 552-842 |
Cow position: | chr5:40892050-40891768 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 0 |
Conread position: | 555-828 |
Cow position: | chr5:67654772-67655029 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 200 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 94, 12 |
Conread position: | 555-841 |
Cow position: | chr5:68377071-68377346 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 205 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 177, 0 |
Conread position: | 564-842 |
Cow position: | chr5:31103768-31104032 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 191 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 16, 98 |
Conread position: | 576-842 |
Cow position: | chr5:73525802-73526062 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 98 |
Conread position: | 578-840 |
Cow position: | chr5:68082483-68082231 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 195 |
Alignm E-value: | 7.00649e-44 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 581-833 |
Cow position: | chr5:40270251-40270005 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 176 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 588-787 |
Cow position: | chr5:47855235-47855435 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 145 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 47, 153 |
Conread position: | 588-834 |
Cow position: | chr5:60410572-60410813 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 163 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 588-838 |
Cow position: | chr5:17387107-17386867 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 175 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 588-839 |
Cow position: | chr5:26378178-26377936 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 185 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 95, 12 |
Conread position: | 589-842 |
Cow position: | chr5:41532699-41532445 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 174 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 110, 33 |
Conread position: | 593-842 |
Cow position: | chr5:62272564-62272320 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 173 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 176, 0 |
Conread position: | 596-842 |
Cow position: | chr5:64176687-64176449 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 178 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 148, 99 |
Conread position: | 598-831 |
Cow position: | chr5:7721756-7721989 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 186 |
Alignm E-value: | 8.40779e-45 |
Alignm gaps (pig, cow): | 192, 14 |
Conread position: | 600-842 |
Cow position: | chr5:12563560-12563321 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 182 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 602-841 |
Cow position: | chr5:20808160-20808392 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 182 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 219, 22 |
Conread position: | 604-842 |
Cow position: | chr5:66982987-66983216 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 160 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 605-842 |
Cow position: | chr5:29843812-29844041 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 177 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 613-841 |
Cow position: | chr5:41520040-41519820 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 172 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 613-842 |
Cow position: | chr5:38831477-38831264 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 167 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 614-841 |
Cow position: | chr5:45192375-45192152 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 75, 120 |
Conread position: | 615-842 |
Cow position: | chr5:29755816-29756040 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 170 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 167, 5 |
Conread position: | 618-842 |
Cow position: | chr5:50443151-50442936 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 162 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 618-842 |
Cow position: | chr5:65593391-65593608 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 163 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 620-842 |
Cow position: | chr5:35988836-35989047 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 621-842 |
Cow position: | chr5:39710361-39710586 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 169 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 62, 184 |
Conread position: | 624-842 |
Cow position: | chr5:57365549-57365336 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 168 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 626-841 |
Cow position: | chr5:48407060-48406850 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 161 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 196, 122 |
Conread position: | 627-842 |
Cow position: | chr5:12323268-12323063 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 155 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 56, 108 |
Conread position: | 627-842 |
Cow position: | chr5:17868977-17869175 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 160 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 627-842 |
Cow position: | chr5:47756293-47756499 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 627-842 |
Cow position: | chr5:67932942-67932733 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 155 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 628-840 |
Cow position: | chr5:27305797-27305999 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 631-842 |
Cow position: | chr5:33270003-33270208 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 162 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 52, 121 |
Conread position: | 632-829 |
Cow position: | chr5:42044640-42044834 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 150 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 52, 98 |
Conread position: | 632-842 |
Cow position: | chr5:63608035-63607831 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 633-842 |
Cow position: | chr5:55176419-55176623 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 158 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 115, 0 |
Conread position: | 640-841 |
Cow position: | chr5:56927311-56927508 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 140 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 640-842 |
Cow position: | chr5:35144883-35145081 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 642-839 |
Cow position: | chr5:7585008-7584817 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 146 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 645-823 |
Cow position: | chr5:63174173-63174000 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 645-842 |
Cow position: | chr5:33266111-33265921 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 146 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 182, 90 |
Conread position: | 646-837 |
Cow position: | chr5:53146296-53146109 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 144 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 646-842 |
Cow position: | chr5:70402621-70402816 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 144 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 24, 81 |
Conread position: | 650-842 |
Cow position: | chr5:15204503-15204676 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 147 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 110, 50 |
Conread position: | 651-842 |
Cow position: | chr5:65776845-65776661 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 138 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 656-842 |
Cow position: | chr5:25935182-25935364 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 137 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 141, 79 |
Conread position: | 658-842 |
Cow position: | chr5:60752534-60752357 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 137 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 660-842 |
Cow position: | chr5:51999745-51999924 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 668-842 |
Cow position: | chr5:29504670-29504836 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 672-842 |
Cow position: | chr5:25730039-25729877 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 124 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 677-810 |
Cow position: | chr5:1277107-1276979 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 677-842 |
Cow position: | chr5:41604183-41604341 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 678-841 |
Cow position: | chr5:28946486-28946323 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 126, 96 |
Conread position: | 678-842 |
Cow position: | chr5:30977948-30978116 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 133 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 685-842 |
Cow position: | chr5:9430904-9430743 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 124 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 695-841 |
Cow position: | chr5:20974863-20974716 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 55, 0 |
Show alignments to all cow chromosomes.