Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 319-491
Cow position: chr5:40270602-40270433 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 320-841
Cow position: chr5:43003996-43004509 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 25

Conread position: 328-501
Cow position: chr5:23845301-23845127 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 60, 17

Conread position: 328-547
Cow position: chr5:29558846-29559060 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 0

Conread position: 328-842
Cow position: chr5:72007642-72007145 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 17

Conread position: 329-494
Cow position: chr5:33064698-33064535 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 14

Conread position: 329-495
Cow position: chr5:35446378-35446218 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 329-575
Cow position: chr5:25920535-25920295 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 16, 0

Conread position: 329-791
Cow position: chr5:27656111-27656566 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 16

Conread position: 329-838
Cow position: chr5:25930641-25930159 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 5

Conread position: 329-839
Cow position: chr5:34669837-34669342 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 16

Conread position: 329-840
Cow position: chr5:46295433-46294938 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 199

Conread position: 329-842
Cow position: chr5:34192172-34192685 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 16

Conread position: 329-842
Cow position: chr5:40928774-40928272 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 19

Conread position: 329-842
Cow position: chr5:51502136-51502629 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 16

Conread position: 330-525
Cow position: chr5:15855979-15855786 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 15

Conread position: 330-532
Cow position: chr5:45941745-45941539 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 15

Conread position: 330-657
Cow position: chr5:22857380-22857046 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 15

Conread position: 330-693
Cow position: chr5:23648177-23647818 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 15

Conread position: 330-732
Cow position: chr5:3551455-3551070 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 330-788
Cow position: chr5:48405769-48405319 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 330-823
Cow position: chr5:11956250-11955776 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 86

Conread position: 330-838
Cow position: chr5:27491230-27491729 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 15

Conread position: 330-838
Cow position: chr5:70249385-70249882 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 330-839
Cow position: chr5:53753330-53752818 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 15

Conread position: 330-842
Cow position: chr5:17027318-17027829 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 330-842
Cow position: chr5:36406409-36406908 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 15

Conread position: 330-842
Cow position: chr5:39448294-39447804 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 330-842
Cow position: chr5:72172255-72172766 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 15

Conread position: 331-842
Cow position: chr5:9676372-9675863 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 14

Conread position: 332-807
Cow position: chr5:41228788-41228325 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 13

Conread position: 333-838
Cow position: chr5:44379696-44380202 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 12

Conread position: 334-534
Cow position: chr5:29122771-29122573 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 160
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 53, 11

Conread position: 335-839
Cow position: chr5:59304041-59303540 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 10

Conread position: 335-841
Cow position: chr5:54088970-54089440 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 335-842
Cow position: chr5:30275941-30276426 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 138

Conread position: 335-842
Cow position: chr5:31560511-31560987 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 10

Conread position: 335-842
Cow position: chr5:37758583-37758073 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 195

Conread position: 336-766
Cow position: chr5:59771305-59771729 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 165

Conread position: 337-842
Cow position: chr5:23641767-23641254 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 8

Conread position: 338-839
Cow position: chr5:27046166-27046660 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 196

Conread position: 342-839
Cow position: chr5:29255952-29255461 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 192

Conread position: 342-839
Cow position: chr5:31285119-31285610 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 192

Conread position: 343-838
Cow position: chr5:7808610-7808113 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 13

Conread position: 344-452
Cow position: chr5:32810764-32810652 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 344-733
Cow position: chr5:40357694-40357313 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 38

Conread position: 344-773
Cow position: chr5:14781673-14781257 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 344-786
Cow position: chr5:50205852-50206291 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 119

Conread position: 345-842
Cow position: chr5:6287080-6286612 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 47

Conread position: 345-842
Cow position: chr5:19969775-19969301 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 64

Conread position: 347-470
Cow position: chr5:47855096-47855222 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 347-561
Cow position: chr5:5787061-5786844 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 47, 126

Conread position: 347-755
Cow position: chr5:49117082-49116671 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 183

Conread position: 347-823
Cow position: chr5:31217362-31217821 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 50

Conread position: 347-832
Cow position: chr5:43991551-43992013 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 46

Conread position: 347-839
Cow position: chr5:49221230-49220744 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 185

Conread position: 347-842
Cow position: chr5:50599326-50599797 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 348-838
Cow position: chr5:35762560-35763017 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 41

Conread position: 348-839
Cow position: chr5:49429063-49428563 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 138

Conread position: 348-841
Cow position: chr5:68273579-68273094 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-842
Cow position: chr5:14904809-14904325 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 68

Conread position: 348-842
Cow position: chr5:74462781-74462298 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 41

Conread position: 349-823
Cow position: chr5:62159648-62159171 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 42

Conread position: 350-838
Cow position: chr5:4199361-4198883 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 58

Conread position: 357-842
Cow position: chr5:19130822-19131278 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 60

Conread position: 357-842
Cow position: chr5:48828402-48828878 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 96

Conread position: 361-842
Cow position: chr5:23006829-23006382 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 20

Conread position: 375-842
Cow position: chr5:48574499-48574043 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 154

Conread position: 378-841
Cow position: chr5:32316025-32315555 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 155

Conread position: 380-842
Cow position: chr5:8421272-8420827 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 381-840
Cow position: chr5:14833325-14832875 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 48

Conread position: 381-842
Cow position: chr5:69771457-69771914 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 147

Conread position: 382-823
Cow position: chr5:1493163-1492725 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 11

Conread position: 382-842
Cow position: chr5:5812801-5812353 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 0

Conread position: 387-842
Cow position: chr5:35967496-35967938 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 389-842
Cow position: chr5:24643512-24643084 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 140

Conread position: 389-842
Cow position: chr5:46235518-46235075 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 137

Conread position: 395-837
Cow position: chr5:72901849-72902284 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 26

Conread position: 398-814
Cow position: chr5:72041505-72041915 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 0

Conread position: 398-840
Cow position: chr5:39243042-39242619 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 49

Conread position: 399-842
Cow position: chr5:42918914-42918474 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 286
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 71, 133

Conread position: 403-842
Cow position: chr5:13045459-13045041 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 34

Conread position: 408-840
Cow position: chr5:21943684-21944110 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 120

Conread position: 408-841
Cow position: chr5:10790410-10789972 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 122

Conread position: 410-817
Cow position: chr5:46104623-46104234 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 410-842
Cow position: chr5:30816024-30816446 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 117

Conread position: 423-822
Cow position: chr5:12558068-12557691 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 31

Conread position: 431-839
Cow position: chr5:54110566-54110969 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 85

Conread position: 436-842
Cow position: chr5:14313852-14314253 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 93

Conread position: 437-836
Cow position: chr5:4630450-4630851 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 53

Conread position: 442-842
Cow position: chr5:24837696-24837309 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 86

Conread position: 444-841
Cow position: chr5:57584361-57584753 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 86

Conread position: 458-842
Cow position: chr5:20780097-20779719 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 41

Conread position: 485-807
Cow position: chr5:61101638-61101952 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 205
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 485-842
Cow position: chr5:40896718-40896380 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 128, 0

Conread position: 486-842
Cow position: chr5:41608706-41609045 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 283, 29

Conread position: 489-841
Cow position: chr5:42232320-42231977 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 228
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 490-842
Cow position: chr5:26045685-26046030 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 498-822
Cow position: chr5:47718923-47719229 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 25

Conread position: 498-842
Cow position: chr5:51293333-51293000 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 500-842
Cow position: chr5:46023780-46023447 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 500-842
Cow position: chr5:46080858-46080525 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 500-842
Cow position: chr5:46130382-46130049 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 515-841
Cow position: chr5:32307798-32307486 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 14, 0

Conread position: 516-842
Cow position: chr5:46611676-46611353 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 11

Conread position: 525-841
Cow position: chr5:18573589-18573900 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 214

Conread position: 526-842
Cow position: chr5:45941208-45940882 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 240

Conread position: 535-839
Cow position: chr5:34232164-34232457 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 537-841
Cow position: chr5:54556636-54556935 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 43

Conread position: 540-838
Cow position: chr5:34115079-34115375 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 198

Conread position: 541-823
Cow position: chr5:3439873-3439596 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 545-839
Cow position: chr5:31661719-31661437 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 546-842
Cow position: chr5:29750574-29750862 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 55

Conread position: 547-842
Cow position: chr5:32378316-32378603 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 118

Conread position: 548-842
Cow position: chr5:29559784-29560068 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 67, 0

Conread position: 551-839
Cow position: chr5:38286546-38286828 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 193
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 552-842
Cow position: chr5:40892050-40891768 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 0

Conread position: 555-828
Cow position: chr5:67654772-67655029 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 94, 12

Conread position: 555-841
Cow position: chr5:68377071-68377346 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 205
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 177, 0

Conread position: 564-842
Cow position: chr5:31103768-31104032 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 191
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 16, 98

Conread position: 576-842
Cow position: chr5:73525802-73526062 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 98

Conread position: 578-840
Cow position: chr5:68082483-68082231 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 82, 0

Conread position: 581-833
Cow position: chr5:40270251-40270005 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 133, 0

Conread position: 588-787
Cow position: chr5:47855235-47855435 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 47, 153

Conread position: 588-834
Cow position: chr5:60410572-60410813 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 588-838
Cow position: chr5:17387107-17386867 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 156, 0

Conread position: 588-839
Cow position: chr5:26378178-26377936 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 95, 12

Conread position: 589-842
Cow position: chr5:41532699-41532445 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 110, 33

Conread position: 593-842
Cow position: chr5:62272564-62272320 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 176, 0

Conread position: 596-842
Cow position: chr5:64176687-64176449 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 148, 99

Conread position: 598-831
Cow position: chr5:7721756-7721989 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 192, 14

Conread position: 600-842
Cow position: chr5:12563560-12563321 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 41, 0

Conread position: 602-841
Cow position: chr5:20808160-20808392 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 219, 22

Conread position: 604-842
Cow position: chr5:66982987-66983216 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 121, 0

Conread position: 605-842
Cow position: chr5:29843812-29844041 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 613-841
Cow position: chr5:41520040-41519820 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 98

Conread position: 613-842
Cow position: chr5:38831477-38831264 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 614-841
Cow position: chr5:45192375-45192152 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 120

Conread position: 615-842
Cow position: chr5:29755816-29756040 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 167, 5

Conread position: 618-842
Cow position: chr5:50443151-50442936 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 130, 0

Conread position: 618-842
Cow position: chr5:65593391-65593608 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 129, 0

Conread position: 620-842
Cow position: chr5:35988836-35989047 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 621-842
Cow position: chr5:39710361-39710586 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 62, 184

Conread position: 624-842
Cow position: chr5:57365549-57365336 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 111, 0

Conread position: 626-841
Cow position: chr5:48407060-48406850 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 196, 122

Conread position: 627-842
Cow position: chr5:12323268-12323063 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 108

Conread position: 627-842
Cow position: chr5:17868977-17869175 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 627-842
Cow position: chr5:47756293-47756499 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 627-842
Cow position: chr5:67932942-67932733 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 628-840
Cow position: chr5:27305797-27305999 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 631-842
Cow position: chr5:33270003-33270208 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 52, 121

Conread position: 632-829
Cow position: chr5:42044640-42044834 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 98

Conread position: 632-842
Cow position: chr5:63608035-63607831 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 118, 0

Conread position: 633-842
Cow position: chr5:55176419-55176623 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 640-841
Cow position: chr5:56927311-56927508 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 640-842
Cow position: chr5:35144883-35145081 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 642-839
Cow position: chr5:7585008-7584817 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 0

Conread position: 645-823
Cow position: chr5:63174173-63174000 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 645-842
Cow position: chr5:33266111-33265921 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 182, 90

Conread position: 646-837
Cow position: chr5:53146296-53146109 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 646-842
Cow position: chr5:70402621-70402816 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 81

Conread position: 650-842
Cow position: chr5:15204503-15204676 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 110, 50

Conread position: 651-842
Cow position: chr5:65776845-65776661 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 656-842
Cow position: chr5:25935182-25935364 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 141, 79

Conread position: 658-842
Cow position: chr5:60752534-60752357 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 660-842
Cow position: chr5:51999745-51999924 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 668-842
Cow position: chr5:29504670-29504836 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 672-842
Cow position: chr5:25730039-25729877 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 677-810
Cow position: chr5:1277107-1276979 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 677-842
Cow position: chr5:41604183-41604341 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 678-841
Cow position: chr5:28946486-28946323 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 126, 96

Conread position: 678-842
Cow position: chr5:30977948-30978116 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 685-842
Cow position: chr5:9430904-9430743 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 695-841
Cow position: chr5:20974863-20974716 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 0

Show alignments to all cow chromosomes.