Cow genome map

Conread name: Thy1-THY010085D12

Conread position: 325-823
Cow position:
Alignm length: 505
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 20

Conread position: 328-837
Cow position:
Alignm length: 519
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 328-839
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 17

Conread position: 328-840
Cow position:
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 17

Conread position: 328-842
Cow position:
Alignm length: 525
Alignm identity: 341
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 58, 17

Conread position: 328-842
Cow position:
Alignm length: 517
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 17

Conread position: 329-532
Cow position:
Alignm length: 210
Alignm identity: 157
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 58, 19

Conread position: 329-638
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 57, 19

Conread position: 329-754
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 329-791
Cow position:
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 45

Conread position: 329-841
Cow position:
Alignm length: 517
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 16

Conread position: 329-842
Cow position:
Alignm length: 518
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 16

Conread position: 329-842
Cow position:
Alignm length: 516
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 330-532
Cow position:
Alignm length: 210
Alignm identity: 159
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 51, 15

Conread position: 330-606
Cow position:
Alignm length: 281
Alignm identity: 200
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 15

Conread position: 330-694
Cow position:
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 17

Conread position: 330-777
Cow position:
Alignm length: 453
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 15

Conread position: 330-833
Cow position:
Alignm length: 515
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 17

Conread position: 330-838
Cow position:
Alignm length: 519
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 15

Conread position: 330-841
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 15

Conread position: 330-842
Cow position:
Alignm length: 528
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 18

Conread position: 330-842
Cow position:
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 330-842
Cow position:
Alignm length: 528
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 15

Conread position: 330-842
Cow position:
Alignm length: 520
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 15

Conread position: 330-842
Cow position:
Alignm length: 522
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 15

Conread position: 330-842
Cow position:
Alignm length: 513
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 332-504
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 334-538
Cow position:
Alignm length: 209
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 11

Conread position: 334-547
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 11

Conread position: 334-828
Cow position:
Alignm length: 499
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 11

Conread position: 334-839
Cow position:
Alignm length: 507
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 11

Conread position: 334-842
Cow position:
Alignm length: 520
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 11

Conread position: 336-842
Cow position:
Alignm length: 514
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 12

Conread position: 337-822
Cow position:
Alignm length: 487
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 323, 10

Conread position: 337-838
Cow position:
Alignm length: 506
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 53

Conread position: 338-839
Cow position:
Alignm length: 507
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 7

Conread position: 340-456
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 340-842
Cow position:
Alignm length: 506
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 342-839
Cow position:
Alignm length: 504
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 124

Conread position: 342-841
Cow position:
Alignm length: 505
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 190

Conread position: 343-831
Cow position:
Alignm length: 498
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 150

Conread position: 344-842
Cow position:
Alignm length: 511
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 169

Conread position: 345-741
Cow position:
Alignm length: 400
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 184

Conread position: 346-731
Cow position:
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 146

Conread position: 347-822
Cow position:
Alignm length: 483
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 74

Conread position: 347-839
Cow position:
Alignm length: 493
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 347-842
Cow position:
Alignm length: 502
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 61

Conread position: 347-842
Cow position:
Alignm length: 501
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 348-839
Cow position:
Alignm length: 496
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-840
Cow position:
Alignm length: 497
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 348-841
Cow position:
Alignm length: 499
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 184

Conread position: 348-841
Cow position:
Alignm length: 498
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 68

Conread position: 348-842
Cow position:
Alignm length: 497
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 152

Conread position: 355-842
Cow position:
Alignm length: 505
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 357-841
Cow position:
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 357-842
Cow position:
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 89

Conread position: 371-840
Cow position:
Alignm length: 476
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 161

Conread position: 371-841
Cow position:
Alignm length: 472
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 143

Conread position: 374-842
Cow position:
Alignm length: 473
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 129

Conread position: 375-836
Cow position:
Alignm length: 463
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 326, 99

Conread position: 378-842
Cow position:
Alignm length: 466
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 26

Conread position: 380-842
Cow position:
Alignm length: 470
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 142

Conread position: 383-842
Cow position:
Alignm length: 467
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 146

Conread position: 386-821
Cow position:
Alignm length: 442
Alignm identity: 276
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 57, 17

Conread position: 389-823
Cow position:
Alignm length: 440
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 14

Conread position: 398-842
Cow position:
Alignm length: 446
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 8

Conread position: 413-822
Cow position:
Alignm length: 417
Alignm identity: 282
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 21, 110

Conread position: 418-822
Cow position:
Alignm length: 405
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 419-823
Cow position:
Alignm length: 405
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 421-815
Cow position:
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 106

Conread position: 421-839
Cow position:
Alignm length: 420
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 91

Conread position: 421-842
Cow position:
Alignm length: 435
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 107

Conread position: 427-839
Cow position:
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 100

Conread position: 428-838
Cow position:
Alignm length: 415
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 19

Conread position: 432-839
Cow position:
Alignm length: 408
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 444-840
Cow position:
Alignm length: 408
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 85

Conread position: 447-839
Cow position:
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 449-842
Cow position:
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 79

Conread position: 450-840
Cow position:
Alignm length: 391
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 477-817
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 44

Conread position: 485-841
Cow position:
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 42

Conread position: 486-823
Cow position:
Alignm length: 339
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 37

Conread position: 486-842
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 41

Conread position: 488-822
Cow position:
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 39

Conread position: 491-837
Cow position:
Alignm length: 352
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 41

Conread position: 498-839
Cow position:
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 29

Conread position: 498-839
Cow position:
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 327, 31

Conread position: 504-779
Cow position:
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 509-813
Cow position:
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 515-841
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 516-842
Cow position:
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 519-791
Cow position:
Alignm length: 289
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 44, 162

Conread position: 527-839
Cow position:
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 13

Conread position: 528-842
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 36

Conread position: 528-842
Cow position:
Alignm length: 316
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 239, 84

Conread position: 538-838
Cow position:
Alignm length: 302
Alignm identity: 214
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 146, 41

Conread position: 550-842
Cow position:
Alignm length: 293
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 0

Conread position: 552-838
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 0

Conread position: 552-839
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 14, 26

Conread position: 553-842
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 139, 0

Conread position: 558-842
Cow position:
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 178

Conread position: 564-842
Cow position:
Alignm length: 281
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 161

Conread position: 566-842
Cow position:
Alignm length: 277
Alignm identity: 184
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 573-819
Cow position:
Alignm length: 251
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 152

Conread position: 573-842
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 179, 0

Conread position: 576-842
Cow position:
Alignm length: 268
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 159

Conread position: 578-842
Cow position:
Alignm length: 265
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 580-841
Cow position:
Alignm length: 262
Alignm identity: 181
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 168, 0

Conread position: 581-838
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 138, 155

Conread position: 588-838
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 589-842
Cow position:
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 98, 145

Conread position: 595-842
Cow position:
Alignm length: 250
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 27

Conread position: 606-841
Cow position:
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 137, 87

Conread position: 606-842
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 53

Conread position: 611-842
Cow position:
Alignm length: 232
Alignm identity: 171
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 25, 0

Conread position: 613-842
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 0

Conread position: 615-838
Cow position:
Alignm length: 224
Alignm identity: 171
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 120, 0

Conread position: 615-842
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 618-813
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 117, 166

Conread position: 618-842
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 77

Conread position: 620-842
Cow position:
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 625-842
Cow position:
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 107, 128

Conread position: 628-836
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 629-842
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 106, 0

Conread position: 632-839
Cow position:
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 38

Conread position: 633-841
Cow position:
Alignm length: 209
Alignm identity: 146
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 99, 0

Conread position: 639-822
Cow position:
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 93, 0

Conread position: 643-842
Cow position:
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 92

Conread position: 647-842
Cow position:
Alignm length: 197
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 86

Conread position: 648-842
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 101

Conread position: 656-840
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 662-842
Cow position:
Alignm length: 181
Alignm identity: 137
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 675-822
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 676-842
Cow position:
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 678-842
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 682-842
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 689-842
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 692-813
Cow position:
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 694-841
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 700-842
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.