Cow genome map
| Conread name: | Thy1-THY010085D12 |
| Conread position: | 324-823 |
| Cow position: | chrX:38999130-38999616 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 328-698 |
| Cow position: | chrX:39387203-39386832 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 328-728 |
| Cow position: | chrX:4482183-4482580 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 328-842 |
| Cow position: | chrX:7805606-7806110 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 17 |
| Conread position: | 329-522 |
| Cow position: | chrX:23415467-23415271 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 18 |
| Conread position: | 329-664 |
| Cow position: | chrX:36839934-36840268 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 19 |
| Conread position: | 329-835 |
| Cow position: | chrX:33803767-33803291 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 329-840 |
| Cow position: | chrX:11073971-11073475 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 329-842 |
| Cow position: | chrX:19929663-19930162 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 329-842 |
| Cow position: | chrX:29875762-29875262 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 329-842 |
| Cow position: | chrX:41733962-41733455 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 16 |
| Conread position: | 330-585 |
| Cow position: | chrX:20503869-20504132 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 330-701 |
| Cow position: | chrX:40693500-40693138 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 15 |
| Conread position: | 330-703 |
| Cow position: | chrX:40365516-40365140 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 330-721 |
| Cow position: | chrX:16021147-16020763 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 15 |
| Conread position: | 330-838 |
| Cow position: | chrX:25282264-25281757 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 15 |
| Conread position: | 330-839 |
| Cow position: | chrX:21318906-21319426 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 330-842 |
| Cow position: | chrX:9837351-9837852 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 15 |
| Conread position: | 330-842 |
| Cow position: | chrX:20801012-20801510 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 330-842 |
| Cow position: | chrX:29942385-29942883 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 18 |
| Conread position: | 330-842 |
| Cow position: | chrX:34008980-34009482 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 331-842 |
| Cow position: | chrX:40788364-40788892 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 332-842 |
| Cow position: | chrX:31261402-31260899 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 13 |
| Conread position: | 334-561 |
| Cow position: | chrX:40560308-40560083 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 334-702 |
| Cow position: | chrX:11744500-11744869 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 334-822 |
| Cow position: | chrX:27450816-27450318 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 14 |
| Conread position: | 334-839 |
| Cow position: | chrX:23969584-23970087 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 11 |
| Conread position: | 334-841 |
| Cow position: | chrX:44901370-44901882 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 334-842 |
| Cow position: | chrX:38852394-38852891 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 335-664 |
| Cow position: | chrX:1729625-1729297 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 159 |
| Conread position: | 335-684 |
| Cow position: | chrX:1617000-1616653 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 78, 10 |
| Conread position: | 335-822 |
| Cow position: | chrX:37118143-37118617 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 335-838 |
| Cow position: | chrX:6766501-6766010 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 10 |
| Conread position: | 335-839 |
| Cow position: | chrX:18656571-18656076 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 10 |
| Conread position: | 335-842 |
| Cow position: | chrX:24442005-24441515 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 336-609 |
| Cow position: | chrX:38839866-38840143 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 336-842 |
| Cow position: | chrX:29876826-29876319 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 337-664 |
| Cow position: | chrX:38935658-38935991 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 8 |
| Conread position: | 340-842 |
| Cow position: | chrX:28633233-28632746 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 59 |
| Conread position: | 341-842 |
| Cow position: | chrX:5934426-5934915 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 238, 27 |
| Conread position: | 343-489 |
| Cow position: | chrX:16325287-16325138 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 343-573 |
| Cow position: | chrX:27395782-27395563 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 344-622 |
| Cow position: | chrX:35028490-35028764 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 124 |
| Conread position: | 344-834 |
| Cow position: | chrX:34993424-34993900 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 344-836 |
| Cow position: | chrX:6836011-6835533 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 344-842 |
| Cow position: | chrX:24006587-24006090 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 304 |
| Conread position: | 345-823 |
| Cow position: | chrX:4995853-4996328 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 191 |
| Conread position: | 345-842 |
| Cow position: | chrX:13406047-13405564 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 179 |
| Conread position: | 347-567 |
| Cow position: | chrX:37684267-37684049 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 347-740 |
| Cow position: | chrX:45464694-45465085 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 153 |
| Conread position: | 347-791 |
| Cow position: | chrX:47000408-46999965 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 347-822 |
| Cow position: | chrX:39939508-39939036 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 75 |
| Conread position: | 347-839 |
| Cow position: | chrX:16702916-16703399 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 63 |
| Conread position: | 347-839 |
| Cow position: | chrX:18244230-18244718 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 177 |
| Conread position: | 347-839 |
| Cow position: | chrX:24483122-24482642 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 347-840 |
| Cow position: | chrX:10409842-10409352 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 321 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 347-840 |
| Cow position: | chrX:11950241-11949763 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 347-841 |
| Cow position: | chrX:37832222-37831736 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 189, 42 |
| Conread position: | 347-842 |
| Cow position: | chrX:3649578-3649076 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 405 |
| Conread position: | 347-842 |
| Cow position: | chrX:39352390-39351913 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 348-839 |
| Cow position: | chrX:16465547-16466029 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 183 |
| Conread position: | 348-840 |
| Cow position: | chrX:20131635-20131150 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 348-841 |
| Cow position: | chrX:5289440-5288956 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 184 |
| Conread position: | 348-841 |
| Cow position: | chrX:5320471-5319987 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 348-841 |
| Cow position: | chrX:19399024-19399509 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 184 |
| Conread position: | 349-840 |
| Cow position: | chrX:17663671-17663182 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 353-838 |
| Cow position: | chrX:28542628-28542154 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 376, 121 |
| Conread position: | 357-842 |
| Cow position: | chrX:37760109-37760600 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 152 |
| Conread position: | 360-842 |
| Cow position: | chrX:12724023-12724501 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 375-836 |
| Cow position: | chrX:3582463-3582923 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 18 |
| Conread position: | 375-841 |
| Cow position: | chrX:47380180-47379736 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 321 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 311, 40 |
| Conread position: | 381-841 |
| Cow position: | chrX:29912622-29913070 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 381-841 |
| Cow position: | chrX:32330914-32331362 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 381-842 |
| Cow position: | chrX:9854561-9855011 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 381-842 |
| Cow position: | chrX:9953400-9953852 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 382-823 |
| Cow position: | chrX:34115568-34115138 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 287 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 382-839 |
| Cow position: | chrX:33538215-33538656 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 68 |
| Conread position: | 384-842 |
| Cow position: | chrX:18293229-18293668 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 309 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 58 |
| Conread position: | 385-841 |
| Cow position: | chrX:20970206-20970655 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 56 |
| Conread position: | 385-842 |
| Cow position: | chrX:6202794-6203241 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 385-842 |
| Cow position: | chrX:25436643-25436196 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 386-842 |
| Cow position: | chrX:40496288-40495866 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 309 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 410, 42 |
| Conread position: | 395-842 |
| Cow position: | chrX:502296-501848 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 110 |
| Conread position: | 396-812 |
| Cow position: | chrX:21625681-21625265 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 132 |
| Conread position: | 397-842 |
| Cow position: | chrX:3406054-3405623 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 130 |
| Conread position: | 399-842 |
| Cow position: | chrX:2524422-2523998 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 98 |
| Conread position: | 402-842 |
| Cow position: | chrX:13405046-13404613 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 14 |
| Conread position: | 409-841 |
| Cow position: | chrX:27117281-27117698 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 421-839 |
| Cow position: | chrX:42531158-42530755 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 32 |
| Conread position: | 421-841 |
| Cow position: | chrX:27949703-27950112 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 272 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 158, 54 |
| Conread position: | 421-842 |
| Cow position: | chrX:36557116-36557522 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 288 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 201, 26 |
| Conread position: | 435-842 |
| Cow position: | chrX:33172626-33172226 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 94 |
| Conread position: | 439-839 |
| Cow position: | chrX:18711876-18712267 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 89 |
| Conread position: | 444-842 |
| Cow position: | chrX:40452874-40452481 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 451-788 |
| Cow position: | chrX:40450281-40449951 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 453-838 |
| Cow position: | chrX:37071762-37072134 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 258, 75 |
| Conread position: | 455-842 |
| Cow position: | chrX:46985234-46984845 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 35 |
| Conread position: | 457-842 |
| Cow position: | chrX:3807759-3808138 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 73 |
| Conread position: | 458-787 |
| Cow position: | chrX:15993755-15994077 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 458-842 |
| Cow position: | chrX:4665259-4664885 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 463-842 |
| Cow position: | chrX:1977861-1978228 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 20 |
| Conread position: | 477-837 |
| Cow position: | chrX:1498970-1499321 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 478-842 |
| Cow position: | chrX:26749499-26749141 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 49 |
| Conread position: | 486-838 |
| Cow position: | chrX:7571291-7571634 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 486-842 |
| Cow position: | chrX:33589528-33589871 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 488-841 |
| Cow position: | chrX:729474-729133 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 489-842 |
| Cow position: | chrX:41304347-41304007 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 490-842 |
| Cow position: | chrX:9537934-9538275 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 37 |
| Conread position: | 491-827 |
| Cow position: | chrX:43408393-43408715 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 491-840 |
| Cow position: | chrX:21415474-21415818 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 198, 36 |
| Conread position: | 491-841 |
| Cow position: | chrX:39292350-39292012 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 493-842 |
| Cow position: | chrX:19400224-19400562 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 495-802 |
| Cow position: | chrX:12823397-12823698 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 291, 33 |
| Conread position: | 498-788 |
| Cow position: | chrX:6642092-6642383 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 30 |
| Conread position: | 498-842 |
| Cow position: | chrX:11115763-11115435 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 498-842 |
| Cow position: | chrX:16078067-16078401 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 498-842 |
| Cow position: | chrX:42499674-42499333 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 31 |
| Conread position: | 504-842 |
| Cow position: | chrX:24826742-24827071 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 9 |
| Conread position: | 522-818 |
| Cow position: | chrX:9911350-9911063 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 526-842 |
| Cow position: | chrX:23414961-23414650 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 225 |
| Conread position: | 536-780 |
| Cow position: | chrX:16514810-16514571 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 0 |
| Conread position: | 547-842 |
| Cow position: | chrX:32329472-32329753 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 552-842 |
| Cow position: | chrX:19878488-19878769 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 554-842 |
| Cow position: | chrX:4123287-4123567 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 33, 62 |
| Conread position: | 558-838 |
| Cow position: | chrX:41067293-41067567 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 558-842 |
| Cow position: | chrX:2146773-2147050 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 576-832 |
| Cow position: | chrX:20957492-20957743 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 147 |
| Conread position: | 576-839 |
| Cow position: | chrX:28993670-28993416 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 118, 54 |
| Conread position: | 581-823 |
| Cow position: | chrX:39125793-39126033 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 588-842 |
| Cow position: | chrX:42470447-42470205 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 241, 44 |
| Conread position: | 589-822 |
| Cow position: | chrX:36294624-36294853 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 71, 147 |
| Conread position: | 593-842 |
| Cow position: | chrX:38548901-38549145 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 595-842 |
| Cow position: | chrX:3161517-3161284 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 596-840 |
| Cow position: | chrX:20976570-20976329 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 221, 137 |
| Conread position: | 600-840 |
| Cow position: | chrX:35223803-35224032 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 601-840 |
| Cow position: | chrX:3208059-3207832 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 604-822 |
| Cow position: | chrX:13177954-13177745 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 604-836 |
| Cow position: | chrX:43980250-43980478 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 221, 131 |
| Conread position: | 617-842 |
| Cow position: | chrX:15596570-15596777 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 618-841 |
| Cow position: | chrX:14974219-14973997 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 89, 121 |
| Conread position: | 619-842 |
| Cow position: | chrX:38840369-38840588 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 621-837 |
| Cow position: | chrX:44086826-44087031 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 621-839 |
| Cow position: | chrX:18695403-18695192 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 624-837 |
| Cow position: | chrX:16706324-16706526 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 108, 119 |
| Conread position: | 627-842 |
| Cow position: | chrX:917850-917638 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 11, 110 |
| Conread position: | 628-839 |
| Cow position: | chrX:22623981-22624185 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 632-842 |
| Cow position: | chrX:32128461-32128262 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 632-842 |
| Cow position: | chrX:47965466-47965253 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 634-839 |
| Cow position: | chrX:27679886-27680091 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 113, 98 |
| Conread position: | 636-841 |
| Cow position: | chrX:42281934-42282135 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 47, 100 |
| Conread position: | 645-840 |
| Cow position: | chrX:35633208-35633023 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 647-833 |
| Cow position: | chrX:30729950-30729773 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 652-819 |
| Cow position: | chrX:20709586-20709747 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 654-842 |
| Cow position: | chrX:160484-160300 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 654-842 |
| Cow position: | chrX:1729020-1728836 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 654-842 |
| Cow position: | chrX:38936247-38936431 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 657-842 |
| Cow position: | chrX:28847324-28847144 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 661-841 |
| Cow position: | chrX:40515467-40515634 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 669-842 |
| Cow position: | chrX:36840431-36840599 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 670-842 |
| Cow position: | chrX:16284409-16284242 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 672-835 |
| Cow position: | chrX:25966622-25966782 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 675-836 |
| Cow position: | chrX:6654741-6654584 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 107, 60 |
| Conread position: | 675-840 |
| Cow position: | chrX:41682931-41683091 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 675-842 |
| Cow position: | chrX:1616481-1616319 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 677-842 |
| Cow position: | chrX:630730-630564 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 75, 124 |
| Conread position: | 687-842 |
| Cow position: | chrX:6277873-6277724 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 691-836 |
| Cow position: | chrX:47166898-47166750 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 725-842 |
| Cow position: | chrX:40187762-40187647 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.