Cow genome map
| Conread name: | Thy1-THY010090A10 |
| Conread position: | 372-618 |
| Cow position: | chr23:2501613-2501859 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 16, 125 |
| Conread position: | 379-557 |
| Cow position: | chr23:23034206-23034383 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 115, 26 |
| Conread position: | 379-581 |
| Cow position: | chr23:4291596-4291386 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 154 |
| Conread position: | 380-585 |
| Cow position: | chr23:2471236-2471030 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 27 |
| Conread position: | 380-618 |
| Cow position: | chr23:24966222-24966468 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 381-562 |
| Cow position: | chr23:39813738-39813550 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 382-616 |
| Cow position: | chr23:16877232-16877001 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 19 |
| Conread position: | 384-618 |
| Cow position: | chr23:33711993-33711755 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 384-633 |
| Cow position: | chr23:307688-307436 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 385-579 |
| Cow position: | chr23:4338117-4338313 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 117 |
| Conread position: | 385-613 |
| Cow position: | chr23:40095416-40095185 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 24, 122 |
| Conread position: | 385-619 |
| Cow position: | chr23:11212734-11212500 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 230, 117 |
| Conread position: | 385-627 |
| Cow position: | chr23:8063760-8063530 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 385-627 |
| Cow position: | chr23:19760554-19760800 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 386-571 |
| Cow position: | chr23:21664530-21664346 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 109, 61 |
| Conread position: | 386-618 |
| Cow position: | chr23:8698651-8698415 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 387-612 |
| Cow position: | chr23:2395371-2395594 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 108, 14 |
| Conread position: | 387-618 |
| Cow position: | chr23:12405592-12405825 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 388-591 |
| Cow position: | chr23:1510700-1510905 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 117 |
| Conread position: | 388-617 |
| Cow position: | chr23:5395252-5395480 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 388-618 |
| Cow position: | chr23:1614427-1614663 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 25, 178 |
| Conread position: | 388-618 |
| Cow position: | chr23:26986042-26986276 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 25, 59 |
| Conread position: | 388-618 |
| Cow position: | chr23:30244754-30244535 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 388-623 |
| Cow position: | chr23:18748847-18749074 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 19, 97 |
| Conread position: | 389-591 |
| Cow position: | chr23:1490582-1490384 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 389-607 |
| Cow position: | chr23:9131740-9131955 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 389-608 |
| Cow position: | chr23:40348420-40348640 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 99, 122 |
| Conread position: | 389-627 |
| Cow position: | chr23:2359100-2358866 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 389-628 |
| Cow position: | chr23:27849217-27848981 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 12 |
| Conread position: | 390-616 |
| Cow position: | chr23:5451547-5451315 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 393-587 |
| Cow position: | chr23:23104268-23104461 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 393-612 |
| Cow position: | chr23:34611275-34611487 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 393-617 |
| Cow position: | chr23:18901843-18902056 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 21, 91 |
| Conread position: | 393-618 |
| Cow position: | chr23:187398-187173 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 394-618 |
| Cow position: | chr23:4646728-4646507 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 394-618 |
| Cow position: | chr23:35965367-35965141 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 94, 30 |
| Conread position: | 395-587 |
| Cow position: | chr23:1429611-1429800 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 25, 103 |
| Conread position: | 395-610 |
| Cow position: | chr23:7155481-7155690 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 92, 143 |
| Conread position: | 395-618 |
| Cow position: | chr23:12363399-12363623 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 109 |
| Conread position: | 398-618 |
| Cow position: | chr23:3967334-3967568 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 29 |
| Conread position: | 399-585 |
| Cow position: | chr23:16664189-16664374 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 399-617 |
| Cow position: | chr23:1981457-1981663 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 401-578 |
| Cow position: | chr23:1916389-1916215 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 401-591 |
| Cow position: | chr23:5617788-5617595 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 6 |
| Conread position: | 401-602 |
| Cow position: | chr23:534440-534238 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 93, 104 |
| Conread position: | 401-617 |
| Cow position: | chr23:14524213-14523982 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 401-618 |
| Cow position: | chr23:1877684-1877901 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 87, 6 |
| Conread position: | 401-618 |
| Cow position: | chr23:5881309-5881523 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 401-618 |
| Cow position: | chr23:19565659-19565446 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 401-618 |
| Cow position: | chr23:40995379-40995168 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 14, 39 |
| Conread position: | 401-619 |
| Cow position: | chr23:18286398-18286186 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 9, 83 |
| Conread position: | 402-599 |
| Cow position: | chr23:13137728-13137922 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 112, 11 |
| Conread position: | 402-612 |
| Cow position: | chr23:1222028-1222236 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 402-618 |
| Cow position: | chr23:1863675-1863469 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 402-618 |
| Cow position: | chr23:5426652-5426428 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 402-618 |
| Cow position: | chr23:25864483-25864705 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 74, 16 |
| Conread position: | 402-620 |
| Cow position: | chr23:1719868-1719654 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 146 |
| Conread position: | 403-606 |
| Cow position: | chr23:24718591-24718795 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 404-617 |
| Cow position: | chr23:23197539-23197342 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 405-617 |
| Cow position: | chr23:385099-385313 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 88, 8 |
| Conread position: | 407-564 |
| Cow position: | chr23:2801223-2801386 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 407-618 |
| Cow position: | chr23:1760625-1760851 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 408-618 |
| Cow position: | chr23:39330087-39330298 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 408-619 |
| Cow position: | chr23:16744750-16744541 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 408-619 |
| Cow position: | chr23:22668305-22668511 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 409-554 |
| Cow position: | chr23:1617565-1617418 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 409-554 |
| Cow position: | chr23:2511351-2511204 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 409-574 |
| Cow position: | chr23:18822226-18822397 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 409-578 |
| Cow position: | chr23:11053691-11053859 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 49 |
| Conread position: | 409-582 |
| Cow position: | chr23:33702184-33702364 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 164 |
| Conread position: | 409-585 |
| Cow position: | chr23:1277049-1276881 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 409-585 |
| Cow position: | chr23:1480848-1480667 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 46 |
| Conread position: | 409-587 |
| Cow position: | chr23:4979077-4979256 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 409-616 |
| Cow position: | chr23:17597628-17597423 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 409-618 |
| Cow position: | chr23:5732743-5732546 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 409-618 |
| Cow position: | chr23:18823190-18822984 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 409-618 |
| Cow position: | chr23:22414103-22414305 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 82, 69 |
| Conread position: | 409-618 |
| Cow position: | chr23:25990232-25990442 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 96 |
| Conread position: | 409-628 |
| Cow position: | chr23:1884967-1885188 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 410-617 |
| Cow position: | chr23:1438483-1438288 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 90 |
| Conread position: | 410-617 |
| Cow position: | chr23:15743296-15743087 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 62 |
| Conread position: | 410-628 |
| Cow position: | chr23:16582701-16582925 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 120 |
| Conread position: | 410-628 |
| Cow position: | chr23:28529746-28529963 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 77, 176 |
| Conread position: | 411-619 |
| Cow position: | chr23:22238615-22238828 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 412-550 |
| Cow position: | chr23:1891279-1891412 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 412-587 |
| Cow position: | chr23:28814582-28814401 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 71, 97 |
| Conread position: | 412-618 |
| Cow position: | chr23:1194292-1194497 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 412-618 |
| Cow position: | chr23:1883596-1883389 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 412-618 |
| Cow position: | chr23:16961489-16961292 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 412-621 |
| Cow position: | chr23:24685443-24685236 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 413-603 |
| Cow position: | chr23:6179346-6179536 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 413-608 |
| Cow position: | chr23:24809235-24809433 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 75, 164 |
| Conread position: | 413-618 |
| Cow position: | chr23:3293891-3293690 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 413-618 |
| Cow position: | chr23:24509886-24509689 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 413-618 |
| Cow position: | chr23:39778599-39778396 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 413-619 |
| Cow position: | chr23:33629124-33628922 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 413-627 |
| Cow position: | chr23:40391677-40391462 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 413-631 |
| Cow position: | chr23:40275355-40275562 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 31 |
| Conread position: | 413-638 |
| Cow position: | chr23:35656611-35656387 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 156 |
| Conread position: | 414-618 |
| Cow position: | chr23:1290507-1290292 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 414-618 |
| Cow position: | chr23:3281909-3282127 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 415-616 |
| Cow position: | chr23:10497896-10497696 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 89 |
| Conread position: | 415-627 |
| Cow position: | chr23:9599686-9599478 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 418-578 |
| Cow position: | chr23:4042646-4042490 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 418-585 |
| Cow position: | chr23:15056379-15056544 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 418-612 |
| Cow position: | chr23:1533097-1532903 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 418-618 |
| Cow position: | chr23:7845485-7845288 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 419-571 |
| Cow position: | chr23:41478072-41477920 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-618 |
| Cow position: | chr23:7361289-7361101 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 140, 37 |
| Conread position: | 424-602 |
| Cow position: | chr23:36200590-36200415 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 424-613 |
| Cow position: | chr23:21945185-21945380 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 426-620 |
| Cow position: | chr23:1585210-1585407 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 68, 192 |
| Conread position: | 427-609 |
| Cow position: | chr23:36022604-36022781 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 427-611 |
| Cow position: | chr23:5447937-5448124 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 427-618 |
| Cow position: | chr23:22587066-22586875 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 427-619 |
| Cow position: | chr23:29626614-29626410 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 431-612 |
| Cow position: | chr23:2160458-2160632 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 431-617 |
| Cow position: | chr23:3394316-3394504 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 134, 60 |
| Conread position: | 431-618 |
| Cow position: | chr23:6244418-6244601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 431-618 |
| Cow position: | chr23:21452548-21452735 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 72 |
| Conread position: | 431-618 |
| Cow position: | chr23:30311746-30311937 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 57 |
| Conread position: | 431-618 |
| Cow position: | chr23:35938513-35938340 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 431-619 |
| Cow position: | chr23:17486643-17486830 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 431-619 |
| Cow position: | chr23:31494051-31493858 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 15 |
| Conread position: | 438-618 |
| Cow position: | chr23:6768086-6767901 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 57, 182 |
| Conread position: | 441-618 |
| Cow position: | chr23:21765090-21764915 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 148, 62 |
| Conread position: | 443-579 |
| Cow position: | chr23:61787-61918 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 446-610 |
| Cow position: | chr23:14191939-14191775 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 162, 57 |
| Conread position: | 446-618 |
| Cow position: | chr23:26825231-26825065 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 450-621 |
| Cow position: | chr23:6367762-6367602 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 452-618 |
| Cow position: | chr23:4501907-4501747 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 53 |
| Conread position: | 464-617 |
| Cow position: | chr23:5540296-5540149 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 39 |
| Conread position: | 464-618 |
| Cow position: | chr23:5785995-5785839 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 473-617 |
| Cow position: | chr23:9268722-9268579 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 479-577 |
| Cow position: | chr23:41099642-41099740 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 83 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-616 |
| Cow position: | chr23:21439868-21440002 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 479-618 |
| Cow position: | chr23:13511858-13511717 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 479-618 |
| Cow position: | chr23:18605272-18605412 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 479-619 |
| Cow position: | chr23:24926947-24926808 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 479-619 |
| Cow position: | chr23:40637389-40637252 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 479-627 |
| Cow position: | chr23:21502498-21502651 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 110, 23 |
| Conread position: | 481-619 |
| Cow position: | chr23:2487860-2487999 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 481-628 |
| Cow position: | chr23:20002386-20002242 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 483-616 |
| Cow position: | chr23:20744466-20744596 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 483-617 |
| Cow position: | chr23:11314905-11315039 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 21 |
| Conread position: | 483-618 |
| Cow position: | chr23:4470370-4470504 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 483-618 |
| Cow position: | chr23:33160572-33160703 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 483-628 |
| Cow position: | chr23:37118585-37118725 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 486-606 |
| Cow position: | chr23:207360-207240 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 486-618 |
| Cow position: | chr23:24867437-24867304 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 487-618 |
| Cow position: | chr23:35368922-35369051 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 487-627 |
| Cow position: | chr23:348823-348962 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 488-615 |
| Cow position: | chr23:22105684-22105559 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 488-618 |
| Cow position: | chr23:3814157-3814286 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 489-628 |
| Cow position: | chr23:16699919-16700057 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 490-612 |
| Cow position: | chr23:17404960-17404840 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 491-618 |
| Cow position: | chr23:11045608-11045482 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 492-616 |
| Cow position: | chr23:5461218-5461344 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 492-618 |
| Cow position: | chr23:2799699-2799575 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 492-618 |
| Cow position: | chr23:5608957-5609085 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 492-618 |
| Cow position: | chr23:29458979-29459104 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 494-618 |
| Cow position: | chr23:5707112-5706988 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 497-612 |
| Cow position: | chr23:3408789-3408910 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 497-617 |
| Cow position: | chr23:1589705-1589584 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 497-617 |
| Cow position: | chr23:1876827-1876707 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 501-617 |
| Cow position: | chr23:1403694-1403810 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.