Cow genome map

Conread name: Thy1-THY010090A10

Conread position: 385-618
Cow position: chr26:33253075-33253307 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 98, 23

Conread position: 386-618
Cow position: chr26:34610944-34611172 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 387-628
Cow position: chr26:21243329-21243101 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 106

Conread position: 388-607
Cow position: chr26:18825040-18825263 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 20, 120

Conread position: 389-587
Cow position: chr26:17554384-17554576 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 12

Conread position: 389-603
Cow position: chr26:33037986-33038199 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 113, 0

Conread position: 389-618
Cow position: chr26:33201832-33202061 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 12

Conread position: 390-570
Cow position: chr26:21320185-21320003 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 26, 17

Conread position: 393-602
Cow position: chr26:6487556-6487766 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 112

Conread position: 393-604
Cow position: chr26:7524984-7525180 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 393-618
Cow position: chr26:22892212-22892436 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 109, 0

Conread position: 393-632
Cow position: chr26:5168625-5168392 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 14

Conread position: 394-584
Cow position: chr26:27482326-27482523 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 138

Conread position: 394-612
Cow position: chr26:8307296-8307513 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 51

Conread position: 395-631
Cow position: chr26:22033710-22033480 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 100, 12

Conread position: 401-581
Cow position: chr26:14293379-14293196 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 401-608
Cow position: chr26:34114493-34114281 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 401-618
Cow position: chr26:5836591-5836811 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 26

Conread position: 401-618
Cow position: chr26:9492148-9491935 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 13, 87

Conread position: 401-618
Cow position: chr26:9535742-9535527 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 7, 97

Conread position: 401-618
Cow position: chr26:20291465-20291683 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 103

Conread position: 401-618
Cow position: chr26:26887907-26888124 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 85

Conread position: 401-619
Cow position: chr26:5666267-5666056 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 136, 11

Conread position: 402-585
Cow position: chr26:21822819-21823003 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 99

Conread position: 404-624
Cow position: chr26:7687016-7687242 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 0

Conread position: 405-618
Cow position: chr26:35704600-35704397 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 75

Conread position: 407-618
Cow position: chr26:1328644-1328847 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 33

Conread position: 407-627
Cow position: chr26:19636511-19636292 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 37

Conread position: 408-606
Cow position: chr26:13022684-13022483 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 155

Conread position: 408-607
Cow position: chr26:23925064-23924870 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 409-560
Cow position: chr26:13292894-13292738 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 41

Conread position: 409-585
Cow position: chr26:34559952-34560129 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 85, 96

Conread position: 409-601
Cow position: chr26:8341703-8341522 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 409-613
Cow position: chr26:830035-829819 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 409-617
Cow position: chr26:19446355-19446144 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 17

Conread position: 409-618
Cow position: chr26:12940627-12940409 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 78, 37

Conread position: 409-618
Cow position: chr26:19591698-19591492 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 84, 0

Conread position: 409-618
Cow position: chr26:21636832-21637028 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 409-618
Cow position: chr26:31137245-31137455 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 38

Conread position: 409-618
Cow position: chr26:32517248-32517447 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 409-619
Cow position: chr26:24240904-24240688 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 25, 39

Conread position: 409-619
Cow position: chr26:28251373-28251161 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 186, 55

Conread position: 409-621
Cow position: chr26:7314847-7314628 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 77, 15

Conread position: 410-585
Cow position: chr26:31382533-31382362 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 410-613
Cow position: chr26:647504-647709 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 188

Conread position: 410-619
Cow position: chr26:32566228-32566019 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 412-562
Cow position: chr26:12891755-12891906 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 413-584
Cow position: chr26:25407597-25407437 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 413-607
Cow position: chr26:15132856-15132657 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 78, 107

Conread position: 413-618
Cow position: chr26:5407195-5406988 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 82, 31

Conread position: 413-618
Cow position: chr26:12144901-12145109 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 413-618
Cow position: chr26:34724658-34724862 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 161

Conread position: 414-579
Cow position: chr26:22798939-22799108 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 414-618
Cow position: chr26:20824908-20825106 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 414-619
Cow position: chr26:31888944-31888741 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 414-627
Cow position: chr26:11875010-11875221 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 84, 31

Conread position: 418-571
Cow position: chr26:26407581-26407733 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 103, 6

Conread position: 418-585
Cow position: chr26:29900850-29901019 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 418-605
Cow position: chr26:16585638-16585457 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 418-608
Cow position: chr26:10700693-10700883 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 64, 50

Conread position: 418-628
Cow position: chr26:12893219-12893428 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 68, 79

Conread position: 418-638
Cow position: chr26:16796002-16796216 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 419-612
Cow position: chr26:32897670-32897854 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 420-628
Cow position: chr26:17057883-17057677 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 62

Conread position: 424-618
Cow position: chr26:13802313-13802122 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 164, 78

Conread position: 424-618
Cow position: chr26:28423490-28423296 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 156
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 165

Conread position: 426-618
Cow position: chr26:33736356-33736545 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 427-592
Cow position: chr26:22176833-22176677 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 427-613
Cow position: chr26:32353520-32353706 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 53

Conread position: 427-618
Cow position: chr26:20770052-20769860 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 55, 77

Conread position: 427-628
Cow position: chr26:29889313-29889512 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 77

Conread position: 428-618
Cow position: chr26:27491295-27491489 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 150

Conread position: 431-552
Cow position: chr26:13800707-13800585 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 431-578
Cow position: chr26:29897381-29897236 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 120
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 55, 13

Conread position: 431-618
Cow position: chr26:32563547-32563358 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 112

Conread position: 460-613
Cow position: chr26:27407515-27407370 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 479-617
Cow position: chr26:12964550-12964684 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 479-618
Cow position: chr26:14175430-14175291 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 479-618
Cow position: chr26:32863522-32863657 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 479-618
Cow position: chr26:33242036-33241898 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 479-618
Cow position: chr26:34154281-34154143 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 479-628
Cow position: chr26:8699901-8700048 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 479-628
Cow position: chr26:32571440-32571292 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 483-617
Cow position: chr26:6865166-6865034 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 483-618
Cow position: chr26:7212441-7212577 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 19

Conread position: 483-618
Cow position: chr26:13021002-13021136 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 486-617
Cow position: chr26:107168-107035 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 486-625
Cow position: chr26:23315916-23315775 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 488-618
Cow position: chr26:677842-677971 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 488-618
Cow position: chr26:31605544-31605415 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 489-618
Cow position: chr26:33392531-33392403 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 493-617
Cow position: chr26:13292654-13292529 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 493-630
Cow position: chr26:8643076-8642944 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 8, 79

Conread position: 497-602
Cow position: chr26:6337917-6337812 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 497-628
Cow position: chr26:22152357-22152226 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 500-616
Cow position: chr26:25197191-25197305 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 506-618
Cow position: chr26:17652081-17651969 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.