Cow genome map
| Conread name: | Thy1-THY010090A10 |
| Conread position: | 368-628 |
| Cow position: | chr27:6241476-6241218 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 33 |
| Conread position: | 379-581 |
| Cow position: | chr27:21951256-21951051 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 116, 34 |
| Conread position: | 382-633 |
| Cow position: | chr27:3498284-3498526 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 384-587 |
| Cow position: | chr27:24358068-24358266 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 384-608 |
| Cow position: | chr27:10581265-10581483 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 105, 14 |
| Conread position: | 384-627 |
| Cow position: | chr27:1353308-1353556 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 44 |
| Conread position: | 385-587 |
| Cow position: | chr27:26939805-26940012 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 385-618 |
| Cow position: | chr27:426700-426933 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 385-618 |
| Cow position: | chr27:23918309-23918070 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 134 |
| Conread position: | 385-618 |
| Cow position: | chr27:30914735-30914973 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 385-619 |
| Cow position: | chr27:22220277-22220519 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 34, 22 |
| Conread position: | 387-607 |
| Cow position: | chr27:11133817-11134039 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 33, 120 |
| Conread position: | 388-578 |
| Cow position: | chr27:22748057-22748252 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 388-617 |
| Cow position: | chr27:11480906-11480673 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 389-558 |
| Cow position: | chr27:624481-624314 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 105, 31 |
| Conread position: | 389-613 |
| Cow position: | chr27:29598011-29597792 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 389-625 |
| Cow position: | chr27:26434084-26433836 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 389-628 |
| Cow position: | chr27:2592274-2592517 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 12 |
| Conread position: | 389-630 |
| Cow position: | chr27:15315259-15315494 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 229, 24 |
| Conread position: | 390-612 |
| Cow position: | chr27:27531859-27532098 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 98, 17 |
| Conread position: | 391-618 |
| Cow position: | chr27:22035638-22035413 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 393-625 |
| Cow position: | chr27:20828965-20828739 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 393-628 |
| Cow position: | chr27:30869015-30868766 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 117 |
| Conread position: | 394-588 |
| Cow position: | chr27:15867129-15867323 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 394-617 |
| Cow position: | chr27:17397711-17397491 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 394-618 |
| Cow position: | chr27:18435392-18435169 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 394-618 |
| Cow position: | chr27:20628796-20629033 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 395-600 |
| Cow position: | chr27:30884768-30884974 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 101, 12 |
| Conread position: | 396-617 |
| Cow position: | chr27:26853611-26853397 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 61 |
| Conread position: | 397-618 |
| Cow position: | chr27:19508752-19508977 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 400-612 |
| Cow position: | chr27:19576578-19576365 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 401-556 |
| Cow position: | chr27:2934253-2934406 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 36 |
| Conread position: | 401-575 |
| Cow position: | chr27:28932057-28931880 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 87, 126 |
| Conread position: | 401-587 |
| Cow position: | chr27:24035532-24035343 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 401-609 |
| Cow position: | chr27:24240097-24240319 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 401-610 |
| Cow position: | chr27:13204210-13204415 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 161 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 401-613 |
| Cow position: | chr27:12459038-12459243 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 401-616 |
| Cow position: | chr27:16284235-16284437 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 401-618 |
| Cow position: | chr27:4944762-4944550 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 81 |
| Conread position: | 401-618 |
| Cow position: | chr27:15453957-15454172 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 401-618 |
| Cow position: | chr27:15865352-15865571 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 104 |
| Conread position: | 401-618 |
| Cow position: | chr27:16704995-16705215 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 401-619 |
| Cow position: | chr27:23510720-23510952 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 94, 172 |
| Conread position: | 401-628 |
| Cow position: | chr27:28922151-28921920 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 18, 170 |
| Conread position: | 402-562 |
| Cow position: | chr27:3698926-3698764 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 402-581 |
| Cow position: | chr27:31183317-31183503 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 402-610 |
| Cow position: | chr27:30798059-30797856 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 402-618 |
| Cow position: | chr27:23484962-23485173 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 402-628 |
| Cow position: | chr27:9977432-9977659 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 402-631 |
| Cow position: | chr27:7343682-7343451 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 403-613 |
| Cow position: | chr27:20770769-20770569 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 403-621 |
| Cow position: | chr27:16103558-16103774 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 173 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 94, 138 |
| Conread position: | 403-624 |
| Cow position: | chr27:27856086-27856303 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 405-618 |
| Cow position: | chr27:28206552-28206763 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 180 |
| Conread position: | 407-618 |
| Cow position: | chr27:22547637-22547435 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 407-618 |
| Cow position: | chr27:24693169-24693377 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 408-548 |
| Cow position: | chr27:24952200-24952060 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 42 |
| Conread position: | 408-612 |
| Cow position: | chr27:29614792-29615000 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 408-617 |
| Cow position: | chr27:15669022-15668808 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 408-617 |
| Cow position: | chr27:26999671-26999459 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 76, 112 |
| Conread position: | 409-563 |
| Cow position: | chr27:21448069-21447920 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 409-578 |
| Cow position: | chr27:11528682-11528855 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 409-578 |
| Cow position: | chr27:28062441-28062273 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 159, 84 |
| Conread position: | 409-586 |
| Cow position: | chr27:27606541-27606364 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 37 |
| Conread position: | 409-591 |
| Cow position: | chr27:26980212-26980025 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 79, 121 |
| Conread position: | 409-608 |
| Cow position: | chr27:18688659-18688455 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 409-617 |
| Cow position: | chr27:30890054-30890254 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 409-618 |
| Cow position: | chr27:591015-590798 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 75, 15 |
| Conread position: | 409-618 |
| Cow position: | chr27:8353248-8353440 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 409-618 |
| Cow position: | chr27:19387774-19387982 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 86, 37 |
| Conread position: | 409-618 |
| Cow position: | chr27:23594072-23594285 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 75, 160 |
| Conread position: | 409-618 |
| Cow position: | chr27:28478335-28478544 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 19, 81 |
| Conread position: | 409-619 |
| Cow position: | chr27:6162650-6162445 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 410-613 |
| Cow position: | chr27:29164529-29164729 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 410-618 |
| Cow position: | chr27:22171056-22171261 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 410-618 |
| Cow position: | chr27:23560275-23560067 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 410-619 |
| Cow position: | chr27:24440468-24440257 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 31 |
| Conread position: | 410-619 |
| Cow position: | chr27:31210303-31210512 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 117 |
| Conread position: | 410-626 |
| Cow position: | chr27:26118251-26118470 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 81, 120 |
| Conread position: | 410-627 |
| Cow position: | chr27:27389273-27389048 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 410-633 |
| Cow position: | chr27:24223709-24223930 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 84, 34 |
| Conread position: | 412-549 |
| Cow position: | chr27:23527743-23527606 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-578 |
| Cow position: | chr27:178619-178787 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 412-578 |
| Cow position: | chr27:20081375-20081204 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 412-604 |
| Cow position: | chr27:2949560-2949377 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 412-618 |
| Cow position: | chr27:15003223-15003014 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 412-627 |
| Cow position: | chr27:27055052-27055259 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 413-578 |
| Cow position: | chr27:26087077-26087240 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 87, 31 |
| Conread position: | 413-618 |
| Cow position: | chr27:7412150-7412357 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 12, 93 |
| Conread position: | 413-653 |
| Cow position: | chr27:20048394-20048634 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 101, 89 |
| Conread position: | 414-591 |
| Cow position: | chr27:27450125-27449948 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 414-612 |
| Cow position: | chr27:19685951-19685755 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 414-617 |
| Cow position: | chr27:21669353-21669154 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 415-630 |
| Cow position: | chr27:23890692-23890915 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 418-586 |
| Cow position: | chr27:27632831-27632669 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 418-602 |
| Cow position: | chr27:29494136-29493952 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 418-617 |
| Cow position: | chr27:7425426-7425225 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 418-618 |
| Cow position: | chr27:299612-299417 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 418-618 |
| Cow position: | chr27:29593866-29593665 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 418-619 |
| Cow position: | chr27:20897258-20897060 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 75, 87 |
| Conread position: | 425-618 |
| Cow position: | chr27:23108133-23107940 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 70, 170 |
| Conread position: | 426-583 |
| Cow position: | chr27:29183456-29183287 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 427-559 |
| Cow position: | chr27:22150922-22150789 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 67, 79 |
| Conread position: | 427-585 |
| Cow position: | chr27:26909817-26909660 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 70 |
| Conread position: | 427-605 |
| Cow position: | chr27:1184402-1184226 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 427-605 |
| Cow position: | chr27:26504075-26504253 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 147 |
| Conread position: | 427-618 |
| Cow position: | chr27:15409254-15409072 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 427-619 |
| Cow position: | chr27:26323213-26323413 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 68, 186 |
| Conread position: | 427-628 |
| Cow position: | chr27:26188598-26188803 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 160 |
| Conread position: | 428-584 |
| Cow position: | chr27:31031239-31031385 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 428-631 |
| Cow position: | chr27:19660700-19660910 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 431-632 |
| Cow position: | chr27:6319698-6319896 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 432-581 |
| Cow position: | chr27:641261-641118 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 433-612 |
| Cow position: | chr27:6541412-6541590 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 436-618 |
| Cow position: | chr27:20068195-20068013 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 140 |
| Conread position: | 438-658 |
| Cow position: | chr27:23100862-23100635 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 45 |
| Conread position: | 446-619 |
| Cow position: | chr27:1768832-1768659 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 447-616 |
| Cow position: | chr27:20481565-20481404 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 457-612 |
| Cow position: | chr27:26506544-26506700 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 466-619 |
| Cow position: | chr27:26959804-26959649 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 39 |
| Conread position: | 478-618 |
| Cow position: | chr27:20641509-20641371 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 478-628 |
| Cow position: | chr27:6302642-6302494 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 479-612 |
| Cow position: | chr27:788970-788839 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 479-617 |
| Cow position: | chr27:6674107-6674242 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 479-617 |
| Cow position: | chr27:19717741-19717878 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 479-618 |
| Cow position: | chr27:16589876-16589738 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 479-618 |
| Cow position: | chr27:30489584-30489446 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 479-619 |
| Cow position: | chr27:26643516-26643649 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 479-625 |
| Cow position: | chr27:24305264-24305405 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 480-618 |
| Cow position: | chr27:20812732-20812869 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 483-618 |
| Cow position: | chr27:11466633-11466501 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 483-618 |
| Cow position: | chr27:20517494-20517622 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 486-618 |
| Cow position: | chr27:12710084-12710213 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 75, 16 |
| Conread position: | 486-618 |
| Cow position: | chr27:22179933-22179805 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 486-618 |
| Cow position: | chr27:31148593-31148725 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 487-618 |
| Cow position: | chr27:237103-237233 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 487-628 |
| Cow position: | chr27:21393674-21393533 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 34, 42 |
| Conread position: | 488-617 |
| Cow position: | chr27:4720277-4720152 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 488-617 |
| Cow position: | chr27:23483062-23483187 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 488-628 |
| Cow position: | chr27:30359242-30359381 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 490-618 |
| Cow position: | chr27:20549875-20549745 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 492-604 |
| Cow position: | chr27:9697493-9697603 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 492-618 |
| Cow position: | chr27:22348329-22348454 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 99, 10 |
| Conread position: | 492-618 |
| Cow position: | chr27:23942986-23943111 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 500-617 |
| Cow position: | chr27:20553578-20553695 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 500-618 |
| Cow position: | chr27:26407313-26407198 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 507-619 |
| Cow position: | chr27:24014886-24014774 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.