Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               22-463
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               311
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               54-748
               

               Cow position:
               
               

               Alignm length:
               705
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 31
               

               Conread position:
               54-801
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               60-747
               

               Cow position:
               
               

               Alignm length:
               706
               

               Alignm identity:
               428
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               62-517
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               317
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               66, 40
               

               Conread position:
               62-539
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 9
               

               Conread position:
               62-543
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 37
               

               Conread position:
               62-544
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               322
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               60, 302
               

               Conread position:
               62-567
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 46
               

               Conread position:
               62-616
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               71-369
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               71-383
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               71-383
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 31
               

               Conread position:
               71-413
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               71-472
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 151
               

               Conread position:
               71-555
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               71-769
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               426
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               72, 270
               

               Conread position:
               71-799
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               465
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               71-802
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 31
               

               Conread position:
               72-454
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               73-803
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               80-797
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 23
               

               Conread position:
               86-798
               

               Cow position:
               
               

               Alignm length:
               724
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 16
               

               Conread position:
               89-542
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               291
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               92-697
               

               Cow position:
               
               

               Alignm length:
               623
               

               Alignm identity:
               392
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               97-494
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               81, 5
               

               Conread position:
               97-715
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 301
               

               Conread position:
               97-730
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               421
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               11, 200
               

               Conread position:
               102-478
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               102-773
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 51
               

               Conread position:
               102-799
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               460
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               108-275
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 98
               

               Conread position:
               111-482
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               128, 60
               

               Conread position:
               131-562
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               137-789
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 67
               

               Conread position:
               160-312
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               160-370
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 81
               

               Conread position:
               160-517
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               160-538
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 167
               

               Conread position:
               160-697
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 527
               

               Conread position:
               161-438
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               161-700
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               356
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               108, 78
               

               Conread position:
               164-548
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               82, 232
               

               Conread position:
               164-799
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 56
               

               Conread position:
               172-517
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               181-512
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               94, 30
               

               Conread position:
               194-517
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 188
               

               Conread position:
               196-555
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 45
               

               Conread position:
               228-747
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 81
               

               Conread position:
               232-587
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               243-739
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               326
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               37, 164
               

               Conread position:
               244-609
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               149, 35
               

               Conread position:
               244-801
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               356
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               52, 141
               

               Conread position:
               252-652
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               23, 152
               

               Conread position:
               264-799
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 84
               

               Conread position:
               265-562
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 117
               

               Conread position:
               265-612
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 69
               

               Conread position:
               275-554
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               126, 104
               

               Conread position:
               280-799
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 108
               

               Conread position:
               284-801
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               296-738
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 79
               

               Conread position:
               298-572
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               102, 82
               

               Conread position:
               302-693
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               98, 17
               

               Conread position:
               302-801
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 82
               

               Conread position:
               308-622
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               318-687
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               106, 64
               

               Conread position:
               320-526
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 63
               

               Conread position:
               320-572
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               321-757
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               291
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 87
               
Show alignments to all cow chromosomes.