Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 15-661 |
| Cow position: | chr10:38866336-38866980 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 93 |
| Conread position: | 43-523 |
| Cow position: | chr10:19738270-19738761 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 27 |
| Conread position: | 62-266 |
| Cow position: | chr10:65558860-65559068 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 62-377 |
| Cow position: | chr10:3238590-3238913 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 62-429 |
| Cow position: | chr10:49711534-49711907 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 115, 188 |
| Conread position: | 62-492 |
| Cow position: | chr10:63849509-63849924 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 206, 39 |
| Conread position: | 62-655 |
| Cow position: | chr10:7310619-7311216 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 62-799 |
| Cow position: | chr10:39264831-39265568 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 7 |
| Conread position: | 71-332 |
| Cow position: | chr10:37309327-37309604 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 71-466 |
| Cow position: | chr10:47553775-47553401 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 204, 18 |
| Conread position: | 71-470 |
| Cow position: | chr10:43164637-43164246 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 31 |
| Conread position: | 71-762 |
| Cow position: | chr10:20202241-20201557 (view UCSC Genome Browser custom track) |
| Alignm length: | 709 |
| Alignm identity: | 481 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 31 |
| Conread position: | 73-380 |
| Cow position: | chr10:49932519-49932214 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 114, 29 |
| Conread position: | 75-509 |
| Cow position: | chr10:56450096-56450510 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 308 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 76-799 |
| Cow position: | chr10:25631071-25631786 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 26 |
| Conread position: | 84-801 |
| Cow position: | chr10:60703816-60703094 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 59 |
| Conread position: | 86-774 |
| Cow position: | chr10:51780133-51779453 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 16 |
| Conread position: | 87-697 |
| Cow position: | chr10:48823754-48824379 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 398 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 87-802 |
| Cow position: | chr10:61881877-61882591 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 226 |
| Conread position: | 102-495 |
| Cow position: | chr10:34724090-34724483 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 75 |
| Conread position: | 102-705 |
| Cow position: | chr10:2342841-2342274 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 78 |
| Conread position: | 102-772 |
| Cow position: | chr10:10686520-10687183 (view UCSC Genome Browser custom track) |
| Alignm length: | 680 |
| Alignm identity: | 420 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 36, 197 |
| Conread position: | 102-787 |
| Cow position: | chr10:33507736-33507059 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 439 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 75, 153 |
| Conread position: | 103-581 |
| Cow position: | chr10:62587009-62587497 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 75, 289 |
| Conread position: | 131-386 |
| Cow position: | chr10:31004636-31004373 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 254 |
| Conread position: | 131-738 |
| Cow position: | chr10:28906535-28905945 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 160-363 |
| Cow position: | chr10:32469476-32469671 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 79 |
| Conread position: | 160-681 |
| Cow position: | chr10:44100873-44101398 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 6 |
| Conread position: | 160-802 |
| Cow position: | chr10:4119911-4120538 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 403 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 89, 60 |
| Conread position: | 193-782 |
| Cow position: | chr10:47918233-47918815 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 169 |
| Conread position: | 205-572 |
| Cow position: | chr10:44968343-44968706 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 245 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 210-797 |
| Cow position: | chr10:32834940-32835500 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 378 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 214-774 |
| Cow position: | chr10:31384641-31385179 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 358 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 215-800 |
| Cow position: | chr10:20124717-20125282 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 74 |
| Conread position: | 216-548 |
| Cow position: | chr10:22978803-22978472 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 66, 169 |
| Conread position: | 216-791 |
| Cow position: | chr10:24099790-24099216 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 235-772 |
| Cow position: | chr10:40706902-40707427 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 247-676 |
| Cow position: | chr10:44865210-44864772 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 266-759 |
| Cow position: | chr10:44866280-44866774 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 116 |
| Conread position: | 284-747 |
| Cow position: | chr10:44259515-44259043 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 296-539 |
| Cow position: | chr10:31816655-31816415 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 135, 83 |
| Conread position: | 296-713 |
| Cow position: | chr10:39940204-39939793 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 88, 95 |
| Conread position: | 296-747 |
| Cow position: | chr10:63312870-63313317 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 183, 83 |
| Conread position: | 296-760 |
| Cow position: | chr10:2516475-2516931 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 206, 83 |
| Conread position: | 300-791 |
| Cow position: | chr10:40388268-40388750 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 82 |
| Conread position: | 302-572 |
| Cow position: | chr10:9527254-9526989 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 11, 6 |
| Conread position: | 302-758 |
| Cow position: | chr10:14964120-14963669 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 300 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 302-779 |
| Cow position: | chr10:10082634-10082169 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 314 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 308-467 |
| Cow position: | chr10:57060474-57060628 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 308-746 |
| Cow position: | chr10:42102340-42102764 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 76 |
| Conread position: | 320-771 |
| Cow position: | chr10:30466767-30466330 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 295 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 160, 76 |
| Conread position: | 321-519 |
| Cow position: | chr10:5107915-5107725 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 321-538 |
| Cow position: | chr10:33218753-33218544 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 163, 58 |
| Conread position: | 326-689 |
| Cow position: | chr10:61680318-61679965 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 56 |
Show alignments to all cow chromosomes.