Cow genome map

Conread name: Thy1-THY010090H02

Conread position: 62-621
Cow position: chr11:40502638-40502079 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 40

Conread position: 62-631
Cow position: chr11:57595504-57596083 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 40

Conread position: 62-799
Cow position: chr11:43845528-43844790 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 39

Conread position: 71-312
Cow position: chr11:50557003-50556758 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 16

Conread position: 71-539
Cow position: chr11:71302815-71303294 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 31

Conread position: 71-791
Cow position: chr11:16685231-16685935 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 148

Conread position: 71-802
Cow position: chr11:65682025-65682721 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 31

Conread position: 73-465
Cow position: chr11:37438776-37439174 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 29

Conread position: 78-523
Cow position: chr11:47087256-47086833 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 293
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 18

Conread position: 84-509
Cow position: chr11:76960313-76960738 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 282
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 93, 18

Conread position: 87-492
Cow position: chr11:46721358-46720958 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 15

Conread position: 89-732
Cow position: chr11:2721395-2720762 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 89-732
Cow position: chr11:4246310-4246947 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 13

Conread position: 91-572
Cow position: chr11:74928661-74929159 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 316
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 113, 11

Conread position: 97-531
Cow position: chr11:52740276-52739851 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 40

Conread position: 97-547
Cow position: chr11:44528925-44529376 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 312
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 153

Conread position: 102-760
Cow position: chr11:62873830-62873189 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 69

Conread position: 102-773
Cow position: chr11:53855405-53856081 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 436
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 68, 213

Conread position: 108-543
Cow position: chr11:46574738-46575179 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 297
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 43, 79

Conread position: 131-800
Cow position: chr11:64478262-64477607 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 56

Conread position: 152-798
Cow position: chr11:11052262-11051623 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 403
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 116, 9

Conread position: 154-773
Cow position: chr11:3263756-3264373 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 60

Conread position: 160-660
Cow position: chr11:9715199-9714711 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 227

Conread position: 161-369
Cow position: chr11:85403738-85403950 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 167

Conread position: 161-688
Cow position: chr11:19795113-19795623 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 49

Conread position: 161-797
Cow position: chr11:5261244-5260603 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 225

Conread position: 164-429
Cow position: chr11:10809318-10809048 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 43, 17

Conread position: 164-507
Cow position: chr11:70195159-70194819 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 55

Conread position: 164-799
Cow position: chr11:35231765-35232371 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 63

Conread position: 165-695
Cow position: chr11:75360896-75360366 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 345
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 109, 174

Conread position: 166-555
Cow position: chr11:84741200-84741578 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 218

Conread position: 166-565
Cow position: chr11:15653428-15653824 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 264
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 40, 99

Conread position: 166-799
Cow position: chr11:17866894-17867516 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 210

Conread position: 167-772
Cow position: chr11:53307953-53307361 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 388
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 118, 39

Conread position: 177-799
Cow position: chr11:46032795-46032170 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 395
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 104, 213

Conread position: 178-802
Cow position: chr11:15942358-15941764 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 388
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 50

Conread position: 182-713
Cow position: chr11:19490500-19491022 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 341
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 74

Conread position: 183-478
Cow position: chr11:6683255-6683544 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 55

Conread position: 186-500
Cow position: chr11:4865390-4865082 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 45

Conread position: 195-799
Cow position: chr11:35508844-35509444 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 90

Conread position: 205-496
Cow position: chr11:67435680-67435407 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 195, 87

Conread position: 215-689
Cow position: chr11:18437367-18436903 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 310
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 175

Conread position: 226-419
Cow position: chr11:36452902-36452708 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 162

Conread position: 228-791
Cow position: chr11:24140235-24140775 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 361
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 34

Conread position: 231-786
Cow position: chr11:15674076-15673530 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 369
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 44, 158

Conread position: 233-758
Cow position: chr11:70602271-70601748 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 7

Conread position: 240-607
Cow position: chr11:4453323-4452968 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 26, 138

Conread position: 265-728
Cow position: chr11:31236360-31235897 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 309
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 12, 139

Conread position: 266-462
Cow position: chr11:12544235-12544429 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 45

Conread position: 267-572
Cow position: chr11:49037367-49037065 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 115

Conread position: 275-715
Cow position: chr11:16654267-16653854 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 284
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 40

Conread position: 282-792
Cow position: chr11:21519723-21520236 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 339
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 125, 12

Conread position: 296-581
Cow position: chr11:4206252-4206546 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 192
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 211

Conread position: 300-572
Cow position: chr11:45839807-45839543 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 100, 82

Conread position: 300-775
Cow position: chr11:79995666-79995203 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 314
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 35

Conread position: 302-783
Cow position: chr11:52134445-52134005 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 320-756
Cow position: chr11:9388441-9388869 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 277
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 89, 65

Conread position: 321-758
Cow position: chr11:9971803-9971370 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 287
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 93, 58

Conread position: 322-773
Cow position: chr11:58816702-58817138 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 299
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 114, 60

Show alignments to all cow chromosomes.