Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               54-802
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 37
               

               Conread position:
               62-539
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               62-656
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 40
               

               Conread position:
               71-697
               

               Cow position:
               
               

               Alignm length:
               646
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 37
               

               Conread position:
               71-801
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 30
               

               Conread position:
               71-802
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 13
               

               Conread position:
               72-801
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 30
               

               Conread position:
               75-801
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 27
               

               Conread position:
               86-571
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               88, 252
               

               Conread position:
               94-799
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               456
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               103-561
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               376, 46
               

               Conread position:
               127-483
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 57
               

               Conread position:
               131-691
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               372
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               137-789
               

               Cow position:
               
               

               Alignm length:
               669
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               160-412
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 120
               

               Conread position:
               160-496
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 133
               

               Conread position:
               160-509
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 68
               

               Conread position:
               160-572
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 70
               

               Conread position:
               161-778
               

               Cow position:
               
               

               Alignm length:
               639
               

               Alignm identity:
               394
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               11, 97
               

               Conread position:
               205-773
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               369
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               206-803
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               209-553
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               92, 55
               

               Conread position:
               210-801
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               375
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               215-708
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               215-790
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               377
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               216-761
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 46
               

               Conread position:
               229-646
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               69, 128
               

               Conread position:
               233-609
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 152
               

               Conread position:
               233-657
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               37, 160
               

               Conread position:
               233-799
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               56, 154
               

               Conread position:
               248-572
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 174
               

               Conread position:
               282-716
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               295
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               118, 14
               

               Conread position:
               300-560
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               312-792
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               163, 73
               

               Conread position:
               320-548
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 76
               
Show alignments to all cow chromosomes.