Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 54-802 |
| Cow position: | chr13:34095023-34094272 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 62-539 |
| Cow position: | chr13:34017198-34016712 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 40 |
| Conread position: | 62-656 |
| Cow position: | chr13:28342108-28341503 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 40 |
| Conread position: | 71-697 |
| Cow position: | chr13:36244028-36243407 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 37 |
| Conread position: | 71-801 |
| Cow position: | chr13:38625119-38625848 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 71-802 |
| Cow position: | chr13:21587460-21588170 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 13 |
| Conread position: | 72-801 |
| Cow position: | chr13:41567264-41566528 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 30 |
| Conread position: | 75-801 |
| Cow position: | chr13:570753-571480 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 86-571 |
| Cow position: | chr13:42201999-42201510 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 252 |
| Conread position: | 94-799 |
| Cow position: | chr13:44463026-44462340 (view UCSC Genome Browser custom track) |
| Alignm length: | 723 |
| Alignm identity: | 456 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 77, 8 |
| Conread position: | 103-561 |
| Cow position: | chr13:45657575-45658008 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 296 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 376, 46 |
| Conread position: | 127-483 |
| Cow position: | chr13:39268467-39268834 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 57 |
| Conread position: | 131-691 |
| Cow position: | chr13:23151498-23152042 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 372 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 137-789 |
| Cow position: | chr13:22188861-22189514 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 92 |
| Conread position: | 160-412 |
| Cow position: | chr13:41482303-41482054 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 39, 120 |
| Conread position: | 160-496 |
| Cow position: | chr13:6737314-6736971 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 133 |
| Conread position: | 160-509 |
| Cow position: | chr13:44426789-44426441 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 68 |
| Conread position: | 160-572 |
| Cow position: | chr13:12906113-12906521 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 70 |
| Conread position: | 161-778 |
| Cow position: | chr13:12272949-12273571 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 394 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 11, 97 |
| Conread position: | 205-773 |
| Cow position: | chr13:5542772-5542220 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 369 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 206-803 |
| Cow position: | chr13:4466322-4466897 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 209-553 |
| Cow position: | chr13:21900709-21900379 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 92, 55 |
| Conread position: | 210-801 |
| Cow position: | chr13:39693044-39693633 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 375 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 80, 50 |
| Conread position: | 215-708 |
| Cow position: | chr13:59654571-59655050 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 215-790 |
| Cow position: | chr13:22398340-22397765 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 377 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 216-761 |
| Cow position: | chr13:32774283-32773741 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 46 |
| Conread position: | 229-646 |
| Cow position: | chr13:37790925-37790500 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 283 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 69, 128 |
| Conread position: | 233-609 |
| Cow position: | chr13:13312679-13313053 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 152 |
| Conread position: | 233-657 |
| Cow position: | chr13:12738882-12739311 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 37, 160 |
| Conread position: | 233-799 |
| Cow position: | chr13:42896006-42896560 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 360 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 56, 154 |
| Conread position: | 248-572 |
| Cow position: | chr13:1058171-1058491 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 174 |
| Conread position: | 282-716 |
| Cow position: | chr13:41550776-41551182 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 295 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 118, 14 |
| Conread position: | 300-560 |
| Cow position: | chr13:57781615-57781368 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 195 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 312-792 |
| Cow position: | chr13:32009019-32009472 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 315 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 163, 73 |
| Conread position: | 320-548 |
| Cow position: | chr13:12403846-12404072 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 105, 76 |
Show alignments to all cow chromosomes.