Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 51-509 |
| Cow position: | chr14:14230128-14230580 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 297 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 239, 36 |
| Conread position: | 54-294 |
| Cow position: | chr14:13097859-13098110 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 62-500 |
| Cow position: | chr14:45962369-45961921 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 62-646 |
| Cow position: | chr14:49062379-49062959 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 364 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 116, 40 |
| Conread position: | 71-290 |
| Cow position: | chr14:3211902-3212126 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 37 |
| Conread position: | 71-353 |
| Cow position: | chr14:46964186-46963889 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 71-443 |
| Cow position: | chr14:7886102-7885716 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 277 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 67, 31 |
| Conread position: | 71-539 |
| Cow position: | chr14:36173742-36174223 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 71-799 |
| Cow position: | chr14:21046885-21046183 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 71-802 |
| Cow position: | chr14:14114099-14114844 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 72-567 |
| Cow position: | chr14:41510650-41511129 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 346 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 105, 30 |
| Conread position: | 72-802 |
| Cow position: | chr14:13543968-13544684 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 72-802 |
| Cow position: | chr14:33281750-33281010 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 173 |
| Conread position: | 74-761 |
| Cow position: | chr14:11564321-11565018 (view UCSC Genome Browser custom track) |
| Alignm length: | 718 |
| Alignm identity: | 449 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 7, 14 |
| Conread position: | 75-496 |
| Cow position: | chr14:26818489-26818915 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 297 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 91, 27 |
| Conread position: | 84-572 |
| Cow position: | chr14:41798256-41798753 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 332 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 131-772 |
| Cow position: | chr14:20706539-20707184 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 408 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 123, 33 |
| Conread position: | 132-581 |
| Cow position: | chr14:34764929-34765382 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 302 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 141-799 |
| Cow position: | chr14:24966772-24966110 (view UCSC Genome Browser custom track) |
| Alignm length: | 679 |
| Alignm identity: | 480 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 56 |
| Conread position: | 160-509 |
| Cow position: | chr14:36327918-36327576 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 106, 177 |
| Conread position: | 183-539 |
| Cow position: | chr14:39506377-39506018 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 83, 178 |
| Conread position: | 189-538 |
| Cow position: | chr14:17050760-17050406 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 207 |
| Conread position: | 194-806 |
| Cow position: | chr14:10391845-10392452 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 228-761 |
| Cow position: | chr14:7812617-7813133 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 332 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 239-801 |
| Cow position: | chr14:13836513-13837063 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 148 |
| Conread position: | 243-731 |
| Cow position: | chr14:39433323-39433817 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 321 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 34, 154 |
| Conread position: | 252-758 |
| Cow position: | chr14:12613200-12613698 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 332 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 14, 153 |
| Conread position: | 296-690 |
| Cow position: | chr14:424205-424585 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 183, 89 |
| Conread position: | 299-518 |
| Cow position: | chr14:5503676-5503892 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 41, 86 |
| Conread position: | 299-745 |
| Cow position: | chr14:5492272-5491831 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 77 |
| Conread position: | 300-567 |
| Cow position: | chr14:29634073-29634336 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 300-715 |
| Cow position: | chr14:5076007-5076406 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 180, 70 |
| Conread position: | 302-760 |
| Cow position: | chr14:1802227-1802689 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 308 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 98, 74 |
| Conread position: | 308-799 |
| Cow position: | chr14:23677312-23676835 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 71 |
| Conread position: | 318-686 |
| Cow position: | chr14:3212130-3212489 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 83, 64 |
Show alignments to all cow chromosomes.