Cow genome map

Conread name: Thy1-THY010090H02

Conread position: 25-395
Cow position: chr15:22239345-22238969 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 247
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 51

Conread position: 62-515
Cow position: chr15:30473940-30473490 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 38

Conread position: 62-802
Cow position: chr15:9389936-9390665 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 40

Conread position: 63-799
Cow position: chr15:37713890-37714601 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 39

Conread position: 71-802
Cow position: chr15:43640066-43640775 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 31

Conread position: 72-414
Cow position: chr15:13537588-13537259 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 203, 30

Conread position: 77-698
Cow position: chr15:11788035-11788672 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 25

Conread position: 80-652
Cow position: chr15:46551290-46550697 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 19

Conread position: 87-773
Cow position: chr15:9735922-9735240 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 436
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 90, 301

Conread position: 91-760
Cow position: chr15:13683150-13683807 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 431
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 11

Conread position: 102-492
Cow position: chr15:8273058-8272673 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 238
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 283, 50

Conread position: 103-797
Cow position: chr15:36299193-36298522 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 146

Conread position: 126-705
Cow position: chr15:20518689-20519269 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 386
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 152

Conread position: 131-396
Cow position: chr15:27759690-27759420 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 176
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 31

Conread position: 131-539
Cow position: chr15:42646815-42646415 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 282
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 11, 91

Conread position: 131-580
Cow position: chr15:17660329-17660781 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 307
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 137, 13

Conread position: 137-519
Cow position: chr15:9132501-9132861 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 267
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 186, 29

Conread position: 137-548
Cow position: chr15:11666950-11667348 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 267
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 139, 56

Conread position: 150-564
Cow position: chr15:40729701-40729287 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 280
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 113, 39

Conread position: 159-795
Cow position: chr15:15172460-15173095 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 409
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 77, 177

Conread position: 160-447
Cow position: chr15:42634185-42633899 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 87

Conread position: 160-795
Cow position: chr15:14718927-14719550 (view UCSC Genome Browser custom track)
Alignm length: 646
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 59

Conread position: 161-656
Cow position: chr15:41147637-41148121 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 226

Conread position: 163-376
Cow position: chr15:45099505-45099723 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 199

Conread position: 173-433
Cow position: chr15:34274435-34274694 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 95, 13

Conread position: 188-517
Cow position: chr15:20440329-20440013 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 80, 197

Conread position: 228-729
Cow position: chr15:4688988-4689482 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 317
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 157

Conread position: 233-500
Cow position: chr15:45174700-45174428 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 155

Conread position: 244-797
Cow position: chr15:34437890-34438423 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 83

Conread position: 252-563
Cow position: chr15:2928239-2928550 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 38

Conread position: 252-696
Cow position: chr15:40171394-40170955 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 304
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 54, 124

Conread position: 252-733
Cow position: chr15:5197934-5198432 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 327
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 130

Conread position: 299-475
Cow position: chr15:16755094-16754919 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 81

Conread position: 300-517
Cow position: chr15:27888717-27888923 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 167
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 100, 82

Conread position: 300-526
Cow position: chr15:23094013-23094228 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 171
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 82

Conread position: 300-772
Cow position: chr15:29449458-29448993 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 302
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 13, 84

Conread position: 302-781
Cow position: chr15:32824893-32824426 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 307
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 80

Conread position: 302-792
Cow position: chr15:7584307-7583839 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 302-799
Cow position: chr15:29813116-29813593 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 26

Conread position: 312-758
Cow position: chr15:25908147-25907709 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 291
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 167, 67

Show alignments to all cow chromosomes.