Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 25-395 |
| Cow position: | chr15:22239345-22238969 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 82, 51 |
| Conread position: | 62-515 |
| Cow position: | chr15:30473940-30473490 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 38 |
| Conread position: | 62-802 |
| Cow position: | chr15:9389936-9390665 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 40 |
| Conread position: | 63-799 |
| Cow position: | chr15:37713890-37714601 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 39 |
| Conread position: | 71-802 |
| Cow position: | chr15:43640066-43640775 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 72-414 |
| Cow position: | chr15:13537588-13537259 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 203, 30 |
| Conread position: | 77-698 |
| Cow position: | chr15:11788035-11788672 (view UCSC Genome Browser custom track) |
| Alignm length: | 657 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 80-652 |
| Cow position: | chr15:46551290-46550697 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 87-773 |
| Cow position: | chr15:9735922-9735240 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 436 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 90, 301 |
| Conread position: | 91-760 |
| Cow position: | chr15:13683150-13683807 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 431 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 11 |
| Conread position: | 102-492 |
| Cow position: | chr15:8273058-8272673 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 283, 50 |
| Conread position: | 103-797 |
| Cow position: | chr15:36299193-36298522 (view UCSC Genome Browser custom track) |
| Alignm length: | 706 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 146 |
| Conread position: | 126-705 |
| Cow position: | chr15:20518689-20519269 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 386 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 41, 152 |
| Conread position: | 131-396 |
| Cow position: | chr15:27759690-27759420 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 144, 31 |
| Conread position: | 131-539 |
| Cow position: | chr15:42646815-42646415 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 282 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 131-580 |
| Cow position: | chr15:17660329-17660781 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 307 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 137, 13 |
| Conread position: | 137-519 |
| Cow position: | chr15:9132501-9132861 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 267 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 186, 29 |
| Conread position: | 137-548 |
| Cow position: | chr15:11666950-11667348 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 56 |
| Conread position: | 150-564 |
| Cow position: | chr15:40729701-40729287 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 113, 39 |
| Conread position: | 159-795 |
| Cow position: | chr15:15172460-15173095 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 409 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 77, 177 |
| Conread position: | 160-447 |
| Cow position: | chr15:42634185-42633899 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 196 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 102, 87 |
| Conread position: | 160-795 |
| Cow position: | chr15:14718927-14719550 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 59 |
| Conread position: | 161-656 |
| Cow position: | chr15:41147637-41148121 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 226 |
| Conread position: | 163-376 |
| Cow position: | chr15:45099505-45099723 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 199 |
| Conread position: | 173-433 |
| Cow position: | chr15:34274435-34274694 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 188-517 |
| Cow position: | chr15:20440329-20440013 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 80, 197 |
| Conread position: | 228-729 |
| Cow position: | chr15:4688988-4689482 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 233-500 |
| Cow position: | chr15:45174700-45174428 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 155 |
| Conread position: | 244-797 |
| Cow position: | chr15:34437890-34438423 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 252-563 |
| Cow position: | chr15:2928239-2928550 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 62, 38 |
| Conread position: | 252-696 |
| Cow position: | chr15:40171394-40170955 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 304 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 54, 124 |
| Conread position: | 252-733 |
| Cow position: | chr15:5197934-5198432 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 327 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 130 |
| Conread position: | 299-475 |
| Cow position: | chr15:16755094-16754919 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 300-517 |
| Cow position: | chr15:27888717-27888923 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 300-526 |
| Cow position: | chr15:23094013-23094228 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 82 |
| Conread position: | 300-772 |
| Cow position: | chr15:29449458-29448993 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 302 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 84 |
| Conread position: | 302-781 |
| Cow position: | chr15:32824893-32824426 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 307 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 98, 80 |
| Conread position: | 302-792 |
| Cow position: | chr15:7584307-7583839 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 302-799 |
| Cow position: | chr15:29813116-29813593 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 26 |
| Conread position: | 312-758 |
| Cow position: | chr15:25908147-25907709 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 167, 67 |
Show alignments to all cow chromosomes.