Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 45-569 |
| Cow position: | chr17:16025269-16025765 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 8 |
| Conread position: | 59-802 |
| Cow position: | chr17:46269-45527 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 43 |
| Conread position: | 63-352 |
| Cow position: | chr17:41319597-41319283 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 40 |
| Conread position: | 71-375 |
| Cow position: | chr17:14260964-14260664 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 31 |
| Conread position: | 71-525 |
| Cow position: | chr17:43443490-43443024 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 71-781 |
| Cow position: | chr17:21217276-21216581 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 31 |
| Conread position: | 71-798 |
| Cow position: | chr17:3730543-3729827 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 29 |
| Conread position: | 71-802 |
| Cow position: | chr17:21986901-21986215 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 53 |
| Conread position: | 71-802 |
| Cow position: | chr17:22500385-22501114 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 78-802 |
| Cow position: | chr17:22237560-22238282 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 32 |
| Conread position: | 87-655 |
| Cow position: | chr17:9752805-9753369 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 370 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 23 |
| Conread position: | 97-594 |
| Cow position: | chr17:29822587-29823082 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 9, 139 |
| Conread position: | 110-380 |
| Cow position: | chr17:24631295-24631022 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 170 |
| Conread position: | 158-516 |
| Cow position: | chr17:37701050-37701405 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 114, 82 |
| Conread position: | 159-512 |
| Cow position: | chr17:18384815-18384468 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 35 |
| Conread position: | 161-417 |
| Cow position: | chr17:31050203-31049943 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 54, 222 |
| Conread position: | 164-548 |
| Cow position: | chr17:6099665-6100041 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 164-753 |
| Cow position: | chr17:23709192-23709758 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 393 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 175-706 |
| Cow position: | chr17:21860697-21860173 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 182-752 |
| Cow position: | chr17:42663448-42662892 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 352 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 113 |
| Conread position: | 205-799 |
| Cow position: | chr17:18265330-18264739 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 172 |
| Conread position: | 234-424 |
| Cow position: | chr17:41512725-41512534 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 40, 151 |
| Conread position: | 250-516 |
| Cow position: | chr17:23279218-23278959 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 149, 67 |
| Conread position: | 272-502 |
| Cow position: | chr17:20919530-20919759 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 104 |
| Conread position: | 296-760 |
| Cow position: | chr17:3305831-3306284 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 183, 83 |
| Conread position: | 300-772 |
| Cow position: | chr17:43460679-43460225 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 67 |
| Conread position: | 302-717 |
| Cow position: | chr17:21859013-21858614 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 135, 83 |
| Conread position: | 302-799 |
| Cow position: | chr17:39747894-39748380 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 177, 69 |
Show alignments to all cow chromosomes.