Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 61-747 |
| Cow position: | chr18:52574327-52575013 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 27 |
| Conread position: | 63-638 |
| Cow position: | chr18:8388467-8389055 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 71-370 |
| Cow position: | chr18:21596136-21595832 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 75, 36 |
| Conread position: | 71-799 |
| Cow position: | chr18:14152414-14153127 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 72-453 |
| Cow position: | chr18:14423489-14423868 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 278 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 75-659 |
| Cow position: | chr18:22409942-22410501 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 27 |
| Conread position: | 78-649 |
| Cow position: | chr18:27544696-27545283 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 24 |
| Conread position: | 87-503 |
| Cow position: | chr18:20287636-20287223 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 292 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 88, 15 |
| Conread position: | 97-389 |
| Cow position: | chr18:32564891-32564595 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 55, 231 |
| Conread position: | 127-464 |
| Cow position: | chr18:53614870-53615193 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 142, 33 |
| Conread position: | 143-466 |
| Cow position: | chr18:19543251-19542931 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 198 |
| Conread position: | 145-772 |
| Cow position: | chr18:28531139-28530519 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 82 |
| Conread position: | 157-791 |
| Cow position: | chr18:37406852-37406234 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 169 |
| Conread position: | 160-720 |
| Cow position: | chr18:183106-183662 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 35 |
| Conread position: | 164-515 |
| Cow position: | chr18:35879441-35879089 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 239 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 111, 25 |
| Conread position: | 164-660 |
| Cow position: | chr18:252303-252820 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 107, 42 |
| Conread position: | 166-772 |
| Cow position: | chr18:37862471-37861844 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 406 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 127, 10 |
| Conread position: | 167-696 |
| Cow position: | chr18:6376867-6377402 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 335 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 77, 162 |
| Conread position: | 168-758 |
| Cow position: | chr18:54059514-54058928 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 374 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 214 |
| Conread position: | 191-378 |
| Cow position: | chr18:12479434-12479248 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 195-549 |
| Cow position: | chr18:11731773-11732109 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 205-492 |
| Cow position: | chr18:44541648-44541368 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 64, 35 |
| Conread position: | 207-802 |
| Cow position: | chr18:21237054-21236485 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 182 |
| Conread position: | 210-801 |
| Cow position: | chr18:2244128-2243576 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 386 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 215-548 |
| Cow position: | chr18:35884037-35883713 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 169 |
| Conread position: | 217-747 |
| Cow position: | chr18:29059442-29058918 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 330 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 174 |
| Conread position: | 223-800 |
| Cow position: | chr18:24587517-24586960 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 226-798 |
| Cow position: | chr18:34210826-34210260 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 376 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 5, 15 |
| Conread position: | 240-572 |
| Cow position: | chr18:37692878-37692549 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 152 |
| Conread position: | 240-799 |
| Cow position: | chr18:51032314-51031764 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 264-798 |
| Cow position: | chr18:26845505-26846029 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 339 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 11, 118 |
| Conread position: | 282-706 |
| Cow position: | chr18:51713614-51713195 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 266 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 11, 98 |
| Conread position: | 296-587 |
| Cow position: | chr18:42239691-42239974 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 183, 86 |
| Conread position: | 302-708 |
| Cow position: | chr18:45663068-45663460 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 279 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 98, 80 |
| Conread position: | 320-795 |
| Cow position: | chr18:18860683-18861167 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 66, 124 |
Show alignments to all cow chromosomes.