Cow genome map
| Conread name: | Thy1-THY010090H02 |
| Conread position: | 52-312 |
| Cow position: | chr19:39937415-39937145 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 114, 187 |
| Conread position: | 62-370 |
| Cow position: | chr19:17803921-17804238 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 62-403 |
| Cow position: | chr19:16005781-16006115 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 72-676 |
| Cow position: | chr19:15060821-15060241 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 36 |
| Conread position: | 73-501 |
| Cow position: | chr19:14367059-14367499 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 29 |
| Conread position: | 73-507 |
| Cow position: | chr19:29143439-29143861 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 29 |
| Conread position: | 80-517 |
| Cow position: | chr19:21211522-21211084 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 22 |
| Conread position: | 98-775 |
| Cow position: | chr19:37844526-37843839 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 423 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 130, 112 |
| Conread position: | 102-773 |
| Cow position: | chr19:5768040-5768701 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 471 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 283 |
| Conread position: | 127-739 |
| Cow position: | chr19:12057471-12058091 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 401 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 24, 16 |
| Conread position: | 131-497 |
| Cow position: | chr19:10116242-10116587 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 253 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 348, 11 |
| Conread position: | 131-539 |
| Cow position: | chr19:35171590-35171193 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 6 |
| Conread position: | 146-545 |
| Cow position: | chr19:8828466-8828855 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 275 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 152, 43 |
| Conread position: | 153-358 |
| Cow position: | chr19:26758948-26759150 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 132 |
| Conread position: | 159-800 |
| Cow position: | chr19:9115376-9114752 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 464 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 29 |
| Conread position: | 160-688 |
| Cow position: | chr19:42870690-42871220 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 142, 66 |
| Conread position: | 160-762 |
| Cow position: | chr19:36036983-36037567 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 161-509 |
| Cow position: | chr19:5940424-5940100 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 108, 34 |
| Conread position: | 161-707 |
| Cow position: | chr19:22860526-22859973 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 231 |
| Conread position: | 161-800 |
| Cow position: | chr19:30455902-30456528 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 228 |
| Conread position: | 161-802 |
| Cow position: | chr19:41214206-41213579 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 475 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 227 |
| Conread position: | 164-371 |
| Cow position: | chr19:20952643-20952441 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 164-738 |
| Cow position: | chr19:42778917-42779492 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 124 |
| Conread position: | 164-759 |
| Cow position: | chr19:28979807-28980373 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 393 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 111, 67 |
| Conread position: | 164-799 |
| Cow position: | chr19:36101413-36100793 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 55 |
| Conread position: | 196-573 |
| Cow position: | chr19:22502343-22501958 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 14, 277 |
| Conread position: | 198-532 |
| Cow position: | chr19:48393844-48394180 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 201-461 |
| Cow position: | chr19:16697184-16696923 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 198 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 209-413 |
| Cow position: | chr19:20672662-20672457 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 68, 176 |
| Conread position: | 226-566 |
| Cow position: | chr19:25556266-25555927 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 162 |
| Conread position: | 233-466 |
| Cow position: | chr19:21162200-21162441 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 160 |
| Conread position: | 243-466 |
| Cow position: | chr19:34269626-34269402 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 59, 37 |
| Conread position: | 247-773 |
| Cow position: | chr19:39603072-39602543 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 348 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 140 |
| Conread position: | 302-547 |
| Cow position: | chr19:39793934-39794175 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 98, 68 |
| Conread position: | 302-733 |
| Cow position: | chr19:34392493-34392100 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 295 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 98, 80 |
| Conread position: | 302-792 |
| Cow position: | chr19:5176030-5175544 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 84 |
| Conread position: | 303-539 |
| Cow position: | chr19:14627222-14627456 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 320-571 |
| Cow position: | chr19:27758210-27758462 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 80 |
| Conread position: | 337-797 |
| Cow position: | chr19:47560290-47559842 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 45 |
Show alignments to all cow chromosomes.