Cow genome map


           Conread name:
           Thy1-THY010090H02
        

               Conread position:
               54-687
               

               Cow position:
               
               

               Alignm length:
               663
               

               Alignm identity:
               416
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               117, 48
               

               Conread position:
               61-715
               

               Cow position:
               
               

               Alignm length:
               666
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 27
               

               Conread position:
               61-762
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               444
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               116, 41
               

               Conread position:
               62-797
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               62-797
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               456
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 40
               

               Conread position:
               62-802
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               70-802
               

               Cow position:
               
               

               Alignm length:
               783
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 360
               

               Conread position:
               71-333
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               97, 31
               

               Conread position:
               71-375
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 159
               

               Conread position:
               71-485
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               71-773
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 37
               

               Conread position:
               71-799
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               71-802
               

               Cow position:
               
               

               Alignm length:
               762
               

               Alignm identity:
               549
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 267
               

               Conread position:
               72-428
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               130, 36
               

               Conread position:
               73-799
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               77-541
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               99, 25
               

               Conread position:
               81-686
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               392
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               87-756
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               442
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               102-456
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               173, 271
               

               Conread position:
               102-761
               

               Cow position:
               
               

               Alignm length:
               685
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 86
               

               Conread position:
               130-532
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               275
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               270, 28
               

               Conread position:
               131-496
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               11, 75
               

               Conread position:
               131-603
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               318
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               41, 206
               

               Conread position:
               137-550
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               152-383
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               153-500
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 188
               

               Conread position:
               153-548
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               97, 138
               

               Conread position:
               160-509
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               106, 229
               

               Conread position:
               160-537
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               111, 54
               

               Conread position:
               160-601
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               59, 6
               

               Conread position:
               160-732
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 80
               

               Conread position:
               161-802
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 53
               

               Conread position:
               167-572
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               101, 133
               

               Conread position:
               178-531
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               222, 36
               

               Conread position:
               181-622
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               294
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               86, 100
               

               Conread position:
               182-754
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               375
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               117, 224
               

               Conread position:
               185-467
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               189-689
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               76, 87
               

               Conread position:
               194-799
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               196-800
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 192
               

               Conread position:
               202-761
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               362
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               219-799
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 167
               

               Conread position:
               228-531
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               45, 159
               

               Conread position:
               228-733
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               335
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               40, 158
               

               Conread position:
               233-756
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               348
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               37, 145
               

               Conread position:
               235-799
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               362
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               34, 150
               

               Conread position:
               240-495
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 103
               

               Conread position:
               242-799
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 182
               

               Conread position:
               243-572
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               32, 91
               

               Conread position:
               246-747
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               323
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               31, 265
               

               Conread position:
               247-773
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               252-759
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               253-760
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               46, 90
               

               Conread position:
               258-696
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 122
               

               Conread position:
               272-509
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               275-797
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               363
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               25, 112
               

               Conread position:
               296-697
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               211, 89
               

               Conread position:
               300-726
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 82
               

               Conread position:
               302-758
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 74
               

               Conread position:
               302-797
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 65
               

               Conread position:
               320-802
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 55
               

               Conread position:
               322-762
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               76, 60
               
Show alignments to all cow chromosomes.